BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0302.p         (210 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001778203.1| NmrA family protein [Burkholderia cenocepaci...   392   e-107
ref|YP_004233139.1| NmrA family protein [Acidovorax avenae subsp...   391   e-107
ref|YP_001811500.1| NmrA family protein [Burkholderia ambifaria ...   390   e-107
ref|YP_003608012.1| NmrA family protein [Burkholderia sp. CCGE10...   389   e-106
ref|YP_833831.1| NmrA family protein [Burkholderia cenocepacia H...   387   e-106

>ref|YP_001778203.1| NmrA family protein [Burkholderia cenocepacia MC0-3]
 ref|ZP_04942891.1| hypothetical protein BCPG_04435 [Burkholderia cenocepacia PC184]
 gb|EAY66062.1| hypothetical protein BCPG_04435 [Burkholderia cenocepacia PC184]
 gb|ACA93713.1| NmrA family protein [Burkholderia cenocepacia MC0-3]
          Length = 317

 Score =  392 bits (1007), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 187/208 (89%), Positives = 198/208 (95%)

Query: 1   MKLARAALQARIPRYFPWQFGVDFDVIGRGSPQDIFDAQLDVRELLRSQHQTEWVIISTG 60
           MKLARAALQARIPRYFPWQFGVDFDVIGRGSPQDIFDAQLDVRELLRSQHQTEWVIISTG
Sbjct: 108 MKLARAALQARIPRYFPWQFGVDFDVIGRGSPQDIFDAQLDVRELLRSQHQTEWVIISTG 167

Query: 61  MFMSYLFEPEFGVVDLQNHAVHALGSLDTAVTLTTPDDIGALTAEVMFAKPRIQNEIVYL 120
           MFMSYLFEP+FGVVDLQN AVHALGSLDTAVTLTTPDDIGALTA V+FA+PRI+NEIVYL
Sbjct: 168 MFMSYLFEPDFGVVDLQNDAVHALGSLDTAVTLTTPDDIGALTAAVVFAQPRIRNEIVYL 227

Query: 121 AGDTVTYGEVADKLEVSLGRPFTRSEWSEEYLLGELARDPHNMMRKYRAAFAQGRGVAWD 180
           AGDTVTYGEVADKL+  LGRPF+RS WSE+YLL ELARDP+NMMRKYRAAFAQGRGVAWD
Sbjct: 228 AGDTVTYGEVADKLQAGLGRPFSRSVWSEQYLLDELARDPNNMMRKYRAAFAQGRGVAWD 287

Query: 181 KSGTFNSQRALAVTDVASWINVNLISGR 208
           KSGTFN +RA+ VTDVASWI+ NL SGR
Sbjct: 288 KSGTFNHRRAIPVTDVASWIDANLASGR 315


>ref|YP_004233139.1| NmrA family protein [Acidovorax avenae subsp. avenae ATCC 19860]
 gb|ADX44572.1| NmrA family protein [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 334

 Score =  391 bits (1004), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 185/209 (88%), Positives = 198/209 (94%)

Query: 1   MKLARAALQARIPRYFPWQFGVDFDVIGRGSPQDIFDAQLDVRELLRSQHQTEWVIISTG 60
           MKLA+AALQARIPRYFPWQFGVDFDVIGRGSPQDIFDAQLDVRELLRSQH TEWVIISTG
Sbjct: 123 MKLAKAALQARIPRYFPWQFGVDFDVIGRGSPQDIFDAQLDVRELLRSQHHTEWVIISTG 182

Query: 61  MFMSYLFEPEFGVVDLQNHAVHALGSLDTAVTLTTPDDIGALTAEVMFAKPRIQNEIVYL 120
           MFMSYLFEPEFGVVDLQN AVHALGSLDTAVTLTTPDDIGALTAEV+FA PRI+NEIVYL
Sbjct: 183 MFMSYLFEPEFGVVDLQNGAVHALGSLDTAVTLTTPDDIGALTAEVVFATPRIRNEIVYL 242

Query: 121 AGDTVTYGEVADKLEVSLGRPFTRSEWSEEYLLGELARDPHNMMRKYRAAFAQGRGVAWD 180
           AGDTVTYGEVADKL+ +LGRPF+RSEW+E+YLL ELARDPHNMMRKYRAAFAQGRGVAWD
Sbjct: 243 AGDTVTYGEVADKLQAALGRPFSRSEWTEQYLLDELARDPHNMMRKYRAAFAQGRGVAWD 302

Query: 181 KSGTFNSQRALAVTDVASWINVNLISGRS 209
           K+GTFN +  + VTDVASWI+ NL+S RS
Sbjct: 303 KNGTFNQRHDIPVTDVASWIHANLVSRRS 331


>ref|YP_001811500.1| NmrA family protein [Burkholderia ambifaria MC40-6]
 gb|ACB67284.1| NmrA family protein [Burkholderia ambifaria MC40-6]
          Length = 317

 Score =  390 bits (1002), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 184/210 (87%), Positives = 197/210 (93%)

Query: 1   MKLARAALQARIPRYFPWQFGVDFDVIGRGSPQDIFDAQLDVRELLRSQHQTEWVIISTG 60
           MKLARAALQARIPRYFPWQFGVDFDVIGRGSPQDIFDAQLDVRELLRSQH+TEWVIISTG
Sbjct: 108 MKLARAALQARIPRYFPWQFGVDFDVIGRGSPQDIFDAQLDVRELLRSQHETEWVIISTG 167

Query: 61  MFMSYLFEPEFGVVDLQNHAVHALGSLDTAVTLTTPDDIGALTAEVMFAKPRIQNEIVYL 120
           MFMSYLFEP+FGVVDLQN AVHALGSLDTAVTLTTPDDIGALTA ++FA+PRI+NEIVYL
Sbjct: 168 MFMSYLFEPDFGVVDLQNDAVHALGSLDTAVTLTTPDDIGALTAAIVFAQPRIRNEIVYL 227

Query: 121 AGDTVTYGEVADKLEVSLGRPFTRSEWSEEYLLGELARDPHNMMRKYRAAFAQGRGVAWD 180
           AGDTVTY EVADKL+  LGRPF+RS WSE+YLL ELARDP+NMMRKYRAAFAQGRGVAWD
Sbjct: 228 AGDTVTYAEVADKLQAGLGRPFSRSVWSEQYLLDELARDPNNMMRKYRAAFAQGRGVAWD 287

Query: 181 KSGTFNSQRALAVTDVASWINVNLISGRSK 210
           K GTFN + A+ VTDVASWIN NL+SGR K
Sbjct: 288 KRGTFNQRHAIPVTDVASWINANLVSGRGK 317


>ref|YP_003608012.1| NmrA family protein [Burkholderia sp. CCGE1002]
 gb|ADG18501.1| NmrA family protein [Burkholderia sp. CCGE1002]
          Length = 317

 Score =  389 bits (998), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 185/210 (88%), Positives = 197/210 (93%)

Query: 1   MKLARAALQARIPRYFPWQFGVDFDVIGRGSPQDIFDAQLDVRELLRSQHQTEWVIISTG 60
           MKLARAALQARIPRYFPWQFGVDFDVIGRGSPQDIFDAQLDVRELLRSQ QTEWVIISTG
Sbjct: 108 MKLARAALQARIPRYFPWQFGVDFDVIGRGSPQDIFDAQLDVRELLRSQDQTEWVIISTG 167

Query: 61  MFMSYLFEPEFGVVDLQNHAVHALGSLDTAVTLTTPDDIGALTAEVMFAKPRIQNEIVYL 120
           MFMSYLFEP+FGVVDLQN A+HALGSL TAVTLTTPDDIGALTA ++FAKPRI+NEIVYL
Sbjct: 168 MFMSYLFEPDFGVVDLQNDAIHALGSLGTAVTLTTPDDIGALTAAIVFAKPRIRNEIVYL 227

Query: 121 AGDTVTYGEVADKLEVSLGRPFTRSEWSEEYLLGELARDPHNMMRKYRAAFAQGRGVAWD 180
           AGDTVTYGEVADKL+ +LGRPF+RSEWSE YLL ELARDP++MMRKYRAAFAQGRGVAWD
Sbjct: 228 AGDTVTYGEVADKLQAALGRPFSRSEWSERYLLDELARDPNDMMRKYRAAFAQGRGVAWD 287

Query: 181 KSGTFNSQRALAVTDVASWINVNLISGRSK 210
           KSGTFN   A+ VTDVASWIN NL SGRS+
Sbjct: 288 KSGTFNQHHAIPVTDVASWINANLNSGRSE 317


>ref|YP_833831.1| NmrA family protein [Burkholderia cenocepacia HI2424]
 gb|ABK06938.1| NmrA family protein [Burkholderia cenocepacia HI2424]
          Length = 317

 Score =  387 bits (995), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 183/210 (87%), Positives = 199/210 (94%)

Query: 1   MKLARAALQARIPRYFPWQFGVDFDVIGRGSPQDIFDAQLDVRELLRSQHQTEWVIISTG 60
           MKLARAALQARIPRYFPWQFGVDFDVIGRGSPQDIFDAQLDVRELLRSQH+TEWVIISTG
Sbjct: 108 MKLARAALQARIPRYFPWQFGVDFDVIGRGSPQDIFDAQLDVRELLRSQHETEWVIISTG 167

Query: 61  MFMSYLFEPEFGVVDLQNHAVHALGSLDTAVTLTTPDDIGALTAEVMFAKPRIQNEIVYL 120
           MFMSYLF+P+FGVVDLQN AVHALGSLDTAVTLTTPDDIGALTAE++FA+PRI+NEIVYL
Sbjct: 168 MFMSYLFKPDFGVVDLQNDAVHALGSLDTAVTLTTPDDIGALTAEIVFAQPRIRNEIVYL 227

Query: 121 AGDTVTYGEVADKLEVSLGRPFTRSEWSEEYLLGELARDPHNMMRKYRAAFAQGRGVAWD 180
           AGDTVTYG VADKL+ +LGRPF+RSEWS +YLL ELARDP+NMMRKYRAAFAQGRGVAWD
Sbjct: 228 AGDTVTYGVVADKLQAALGRPFSRSEWSVQYLLDELARDPNNMMRKYRAAFAQGRGVAWD 287

Query: 181 KSGTFNSQRALAVTDVASWINVNLISGRSK 210
           KSG FN + A+ VTDVASWI+ NL SGRS+
Sbjct: 288 KSGAFNQRHAIPVTDVASWIDANLASGRSE 317