BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0291.p (298 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_367060.1| LysR family transcriptional regulator [Burkhold... 566 e-159 ref|YP_003978584.1| transcriptional regulator [Achromobacter xyl... 557 e-157 ref|YP_003777931.1| MetE/MetH family transcription regulator pro... 533 e-149 ref|YP_971124.1| LysR family transcriptional regulator [Acidovor... 510 e-143 ref|YP_004349570.1| LysR family transcriptional regulator [Burkh... 508 e-142 >ref|YP_367060.1| LysR family transcriptional regulator [Burkholderia sp. 383] gb|ABB06416.1| transcriptional regulator, LysR family [Burkholderia sp. 383] Length = 296 Score = 566 bits (1459), Expect = e-159, Method: Compositional matrix adjust. Identities = 276/289 (95%), Positives = 279/289 (96%) Query: 10 SIVQEVEKQGSLTAAAGVLHVTQSALSHSMKKLEQQLGTDIWLREGRSLRLTQAGQYLLA 69 SIVQEVEKQGSLTAAAGVLHVTQSALSHSMKKLEQQLGTDIWLREGRSLRLTQAGQYLLA Sbjct: 8 SIVQEVEKQGSLTAAAGVLHVTQSALSHSMKKLEQQLGTDIWLREGRSLRLTQAGQYLLA 67 Query: 70 VANRVLPQLNLAEERLQQFAQGERGALRIGMECHPCYQWLLKVVSPYLAAWPDVDVDVKQ 129 VANRVLPQLNLAEERLQQFAQGERG LRIGMECHPCYQWLLKVVSPYLAAWPDVDVDVKQ Sbjct: 68 VANRVLPQLNLAEERLQQFAQGERGTLRIGMECHPCYQWLLKVVSPYLAAWPDVDVDVKQ 127 Query: 130 KFQFGGIGALFGYEIDLLVTPDPLDKPGLVFEPVFDYEQVLVVAGGHKLAKEEYVKPKQL 189 KFQFGGIGALFGYEIDLLVTPDPLDKPGLVFEPVFDYEQVLVVAG HKLAKEEYV+PKQL Sbjct: 128 KFQFGGIGALFGYEIDLLVTPDPLDKPGLVFEPVFDYEQVLVVAGNHKLAKEEYVQPKQL 187 Query: 190 SNEVLVTYPVPVDRLDIYSMFLTPAGITPKRHKPIETTDIMLQMVASGRGVAALPRWLVL 249 SNEVLVTYPVPVDRLDIYSMFLTPAGI PKRHK IETTDIMLQMVASGRGVAALPRWLVL Sbjct: 188 SNEVLVTYPVPVDRLDIYSMFLTPAGIAPKRHKAIETTDIMLQMVASGRGVAALPRWLVL 247 Query: 250 EYADKMDVVPVRLGKNGIAKHIFLGARETDVSIDYLRAFIEQAKGPATA 298 EYADKMDVVPVRLG+NGIAKHI+LGARE DV DYLRAFIEQAKG A Sbjct: 248 EYADKMDVVPVRLGENGIAKHIYLGAREADVGTDYLRAFIEQAKGRGAA 296 >ref|YP_003978584.1| transcriptional regulator [Achromobacter xylosoxidans A8] gb|ADP15869.1| HTH-type transcriptional regulator MetR 2 [Achromobacter xylosoxidans A8] Length = 296 Score = 557 bits (1435), Expect = e-157, Method: Compositional matrix adjust. Identities = 270/289 (93%), Positives = 278/289 (96%) Query: 10 SIVQEVEKQGSLTAAAGVLHVTQSALSHSMKKLEQQLGTDIWLREGRSLRLTQAGQYLLA 69 SIVQEVEKQGSLTAAAGVLHVTQSALSHSMKKLEQQLGTDIWLREGRSLRLTQAGQYLLA Sbjct: 8 SIVQEVEKQGSLTAAAGVLHVTQSALSHSMKKLEQQLGTDIWLREGRSLRLTQAGQYLLA 67 Query: 70 VANRVLPQLNLAEERLQQFAQGERGALRIGMECHPCYQWLLKVVSPYLAAWPDVDVDVKQ 129 VANRVLPQL LAEERL+QFAQGERG+LRIGMECHPCYQWLLK+VSPYLAAWPDVDVDVKQ Sbjct: 68 VANRVLPQLALAEERLRQFAQGERGSLRIGMECHPCYQWLLKIVSPYLAAWPDVDVDVKQ 127 Query: 130 KFQFGGIGALFGYEIDLLVTPDPLDKPGLVFEPVFDYEQVLVVAGGHKLAKEEYVKPKQL 189 KFQFGGIGALFGYEIDLLVTPDPL+KPGLVFEPVFDYEQVLVVAG H LAKEEYV PKQL Sbjct: 128 KFQFGGIGALFGYEIDLLVTPDPLNKPGLVFEPVFDYEQVLVVAGNHPLAKEEYVTPKQL 187 Query: 190 SNEVLVTYPVPVDRLDIYSMFLTPAGITPKRHKPIETTDIMLQMVASGRGVAALPRWLVL 249 SNEVLV YPVPVDRLDIY+MFLTPAGITPKRHK IETTDIMLQMVASGRGVAALPRWLVL Sbjct: 188 SNEVLVAYPVPVDRLDIYNMFLTPAGITPKRHKAIETTDIMLQMVASGRGVAALPRWLVL 247 Query: 250 EYADKMDVVPVRLGKNGIAKHIFLGARETDVSIDYLRAFIEQAKGPATA 298 EYAD M+VVPVRLGK GIAKHI+LGARE DV IDY+RAFIEQAK PATA Sbjct: 248 EYADTMNVVPVRLGKKGIAKHIYLGAREADVGIDYMRAFIEQAKKPATA 296 >ref|YP_003777931.1| MetE/MetH family transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ66023.1| MetE/MetH family transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 295 Score = 533 bits (1372), Expect = e-149, Method: Compositional matrix adjust. Identities = 257/284 (90%), Positives = 272/284 (95%) Query: 10 SIVQEVEKQGSLTAAAGVLHVTQSALSHSMKKLEQQLGTDIWLREGRSLRLTQAGQYLLA 69 SIVQEVE+QGSLTAAAGVLHVTQSALSHSMKKLEQQLGTDIWLREGR LRLTQAGQYLLA Sbjct: 8 SIVQEVERQGSLTAAAGVLHVTQSALSHSMKKLEQQLGTDIWLREGRHLRLTQAGQYLLA 67 Query: 70 VANRVLPQLNLAEERLQQFAQGERGALRIGMECHPCYQWLLKVVSPYLAAWPDVDVDVKQ 129 VANRVLPQL+LAEERL+QFAQGERGALRIGMECHPCYQWLLKVVSPYLAAWPDVDVDVKQ Sbjct: 68 VANRVLPQLSLAEERLRQFAQGERGALRIGMECHPCYQWLLKVVSPYLAAWPDVDVDVKQ 127 Query: 130 KFQFGGIGALFGYEIDLLVTPDPLDKPGLVFEPVFDYEQVLVVAGGHKLAKEEYVKPKQL 189 KFQFGGIGALFGYEIDLLVTPDPLDKPGLVFEPVFDYEQVLVVA H LA +YVKP+QL Sbjct: 128 KFQFGGIGALFGYEIDLLVTPDPLDKPGLVFEPVFDYEQVLVVASDHPLADVDYVKPRQL 187 Query: 190 SNEVLVTYPVPVDRLDIYSMFLTPAGITPKRHKPIETTDIMLQMVASGRGVAALPRWLVL 249 SNEVLVTYPVPVDRLDIY+ FL PAGI P+RHK IETTDIMLQMVASGRGVAALPRWLVL Sbjct: 188 SNEVLVTYPVPVDRLDIYTQFLAPAGIVPRRHKTIETTDIMLQMVASGRGVAALPRWLVL 247 Query: 250 EYADKMDVVPVRLGKNGIAKHIFLGARETDVSIDYLRAFIEQAK 293 EYA++M+VVPVRLGK GIAKHI+LGARE+DV IDYLRAFI++A+ Sbjct: 248 EYAEQMEVVPVRLGKQGIAKHIYLGARESDVEIDYLRAFIDEAR 291 >ref|YP_971124.1| LysR family transcriptional regulator [Acidovorax citrulli AAC00-1] gb|ABM33350.1| transcriptional regulator, LysR family [Acidovorax citrulli AAC00-1] Length = 304 Score = 510 bits (1314), Expect = e-143, Method: Compositional matrix adjust. Identities = 247/289 (85%), Positives = 265/289 (91%) Query: 10 SIVQEVEKQGSLTAAAGVLHVTQSALSHSMKKLEQQLGTDIWLREGRSLRLTQAGQYLLA 69 SIV++VEKQGSLTAAAGVL++TQSALSHSMKKLEQQLGTD+WLREGRSLRLTQAGQYLLA Sbjct: 8 SIVRQVEKQGSLTAAAGVLNLTQSALSHSMKKLEQQLGTDVWLREGRSLRLTQAGQYLLA 67 Query: 70 VANRVLPQLNLAEERLQQFAQGERGALRIGMECHPCYQWLLKVVSPYLAAWPDVDVDVKQ 129 VANRVLPQL LAEERL QFAQGERGALRIGMECHPCYQWLLKVVSPYL AWPDVDVDVKQ Sbjct: 68 VANRVLPQLELAEERLGQFAQGERGALRIGMECHPCYQWLLKVVSPYLTAWPDVDVDVKQ 127 Query: 130 KFQFGGIGALFGYEIDLLVTPDPLDKPGLVFEPVFDYEQVLVVAGGHKLAKEEYVKPKQL 189 KFQFGGIGALFGYEIDLLVTPDPL KPGL FEPVFDYEQVLVVAGGH LA YVKP+QL Sbjct: 128 KFQFGGIGALFGYEIDLLVTPDPLYKPGLQFEPVFDYEQVLVVAGGHALASAAYVKPQQL 187 Query: 190 SNEVLVTYPVPVDRLDIYSMFLTPAGITPKRHKPIETTDIMLQMVASGRGVAALPRWLVL 249 + EVL++YPV ++RLDIY+ FL PAG+TP+RHK IETTDIMLQMVASGRGVAALPRWLV Sbjct: 188 TGEVLISYPVDIERLDIYNQFLLPAGVTPRRHKAIETTDIMLQMVASGRGVAALPRWLVE 247 Query: 250 EYADKMDVVPVRLGKNGIAKHIFLGARETDVSIDYLRAFIEQAKGPATA 298 EYA +MDVVPVRLG GIAK IFLGARE D +IDY+RAFIE A+ PA A Sbjct: 248 EYAARMDVVPVRLGARGIAKQIFLGAREADTAIDYVRAFIELARQPAAA 296 >ref|YP_004349570.1| LysR family transcriptional regulator [Burkholderia gladioli BSR3] gb|AEA64058.1| LysR family transcriptional regulator [Burkholderia gladioli BSR3] Length = 302 Score = 508 bits (1307), Expect = e-142, Method: Compositional matrix adjust. Identities = 247/286 (86%), Positives = 264/286 (92%) Query: 10 SIVQEVEKQGSLTAAAGVLHVTQSALSHSMKKLEQQLGTDIWLREGRSLRLTQAGQYLLA 69 SIVQ+VEKQGSLTAAAGVL++TQSALSHSMKKLEQQLGTDIWLREGRSLRLTQAGQYLLA Sbjct: 8 SIVQQVEKQGSLTAAAGVLNLTQSALSHSMKKLEQQLGTDIWLREGRSLRLTQAGQYLLA 67 Query: 70 VANRVLPQLNLAEERLQQFAQGERGALRIGMECHPCYQWLLKVVSPYLAAWPDVDVDVKQ 129 VANRVLPQL+LAEERL QFA GERGALRIGMECHPCYQWLLKVVSPYLAAWPDVDVDVKQ Sbjct: 68 VANRVLPQLDLAEERLGQFALGERGALRIGMECHPCYQWLLKVVSPYLAAWPDVDVDVKQ 127 Query: 130 KFQFGGIGALFGYEIDLLVTPDPLDKPGLVFEPVFDYEQVLVVAGGHKLAKEEYVKPKQL 189 KFQFGGIGALFGYEIDLLVTPDPL KPGL FEPVFDYEQVLVVA GH LA YVKP+QL Sbjct: 128 KFQFGGIGALFGYEIDLLVTPDPLFKPGLKFEPVFDYEQVLVVAKGHALASATYVKPQQL 187 Query: 190 SNEVLVTYPVPVDRLDIYSMFLTPAGITPKRHKPIETTDIMLQMVASGRGVAALPRWLVL 249 + EVL++YPV ++RLDIY+ FL PAG+TP+RHK IETTDIMLQMVASGRGVAALPRWLV Sbjct: 188 TPEVLISYPVDIERLDIYNQFLLPAGVTPRRHKAIETTDIMLQMVASGRGVAALPRWLVE 247 Query: 250 EYADKMDVVPVRLGKNGIAKHIFLGARETDVSIDYLRAFIEQAKGP 295 EYA +MDVVPVRLG GIAK IFLGARETD +IDY+RAFIE A+ P Sbjct: 248 EYAARMDVVPVRLGARGIAKQIFLGARETDTAIDYVRAFIELAREP 293