BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0288.p (271 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777744.1| F0F1-type ATP synthase subunit a [Herbaspiri... 487 e-135 ref|YP_001355323.1| F0F1 ATP synthase subunit A [Janthinobacteri... 451 e-125 ref|YP_001101633.1| F0F1 ATP synthase subunit A [Herminiimonas a... 432 e-119 ref|YP_004755042.1| ATP synthase subunit A [Collimonas fungivora... 427 e-118 ref|ZP_04579828.1| F0F1 ATP synthase subunit A [Oxalobacter form... 392 e-107 >ref|YP_003777744.1| F0F1-type ATP synthase subunit a [Herbaspirillum seropedicae SmR1] gb|ADJ65836.1| F0F1-type ATP synthase, subunit a protein [Herbaspirillum seropedicae SmR1] Length = 273 Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust. Identities = 250/269 (92%), Positives = 259/269 (96%) Query: 3 AAAHAPTASEYIVHHLGHFSSQHQDKIVDFSIINMDTIFWSVFCGVVGCLFMYLAARKAT 62 AA HAPTASEYIVHHLGH S+QHQ KIVDFSI+N+DTIFWSVFCGV+ CLFM+LAARKAT Sbjct: 5 AAEHAPTASEYIVHHLGHLSTQHQTKIVDFSILNVDTIFWSVFCGVIACLFMFLAARKAT 64 Query: 63 SGVPGRFQAFVEMVVEMVEDQSKAIVHGDRTFIAPLALTVFVWVALMNSLDFLPVDLVSG 122 SGVPGRFQAFVEMVVEMVEDQSKAIVHGDRTFIAP+ALTVFVWVALMNSLDFLPVDL SG Sbjct: 65 SGVPGRFQAFVEMVVEMVEDQSKAIVHGDRTFIAPVALTVFVWVALMNSLDFLPVDLASG 124 Query: 123 IMRLAGLEEIHHRIVPTADLNGTLGIALGVLALMLYYSFKIKGAGGFIHELFAAPFGIWL 182 I+ L GL E+HHRIVPTADLNGTLGIALGVLALMLYYS KIKGAGGFIHELFAAPFGIWL Sbjct: 125 ILGLFGLGEMHHRIVPTADLNGTLGIALGVLALMLYYSVKIKGAGGFIHELFAAPFGIWL 184 Query: 183 APFNLLLNIIEFAAKTVSLGMRLFGNMYAGELLFLLIALLGSAATAFGFVGHVIAGSIWA 242 APFNLLLNIIEFAAKTVSLGMRLFGNMYAGELLFLLIALLGS ATAFGF+GHVIAGSIWA Sbjct: 185 APFNLLLNIIEFAAKTVSLGMRLFGNMYAGELLFLLIALLGSTATAFGFIGHVIAGSIWA 244 Query: 243 IFHILIVLLQAFIFMMLTLVYLGQAHEAH 271 IFHILIVLLQAFIFMMLTLVYLGQAHEAH Sbjct: 245 IFHILIVLLQAFIFMMLTLVYLGQAHEAH 273 >ref|YP_001355323.1| F0F1 ATP synthase subunit A [Janthinobacterium sp. Marseille] sp|A6T476.1|ATP6_JANMA RecName: Full=ATP synthase subunit a; AltName: Full=ATP synthase F0 sector subunit a; AltName: Full=F-ATPase subunit 6 gb|ABR89125.1| F-type H+-transporting ATPase a chain [Janthinobacterium sp. Marseille] Length = 273 Score = 451 bits (1159), Expect = e-125, Method: Compositional matrix adjust. Identities = 226/267 (84%), Positives = 249/267 (93%), Gaps = 2/267 (0%) Query: 7 APTASEYIVHHLGHFSSQHQDKIVDFSIINMDTIFWSVFCGVVGCLFMYLAARKATSGVP 66 APTASEYIVHHLGHFS++HQDKIVDFSIINMDTIFWS+F GVVGCLFMYLAARKATSGVP Sbjct: 7 APTASEYIVHHLGHFSTKHQDKIVDFSIINMDTIFWSIFAGVVGCLFMYLAARKATSGVP 66 Query: 67 GRFQAFVEMVVEMVEDQSKAIVHGDRTFIAPLALTVFVWVALMNSLDFLPVDLVSGIMRL 126 GRFQA VEM+VEMV++Q+K+IVHGDRTFIAPLALTVFVWVALMNSLDFLPVD+ S Sbjct: 67 GRFQAAVEMIVEMVDNQAKSIVHGDRTFIAPLALTVFVWVALMNSLDFLPVDMFSAFFHA 126 Query: 127 AGLEEI--HHRIVPTADLNGTLGIALGVLALMLYYSFKIKGAGGFIHELFAAPFGIWLAP 184 GL+ + HHR+VPTADLNGT+GIALGV ALM++Y+ KIKGAGGF+HELFAAPFGIWLAP Sbjct: 127 VGLDSLITHHRVVPTADLNGTMGIALGVFALMIFYNIKIKGAGGFVHELFAAPFGIWLAP 186 Query: 185 FNLLLNIIEFAAKTVSLGMRLFGNMYAGELLFLLIALLGSAATAFGFVGHVIAGSIWAIF 244 FNLLLN+IEFAAKTVSL MRLFGNMYAGELLFLLIALLGS ATAFGF GHV+AG++WAIF Sbjct: 187 FNLLLNMIEFAAKTVSLAMRLFGNMYAGELLFLLIALLGSTATAFGFFGHVVAGTLWAIF 246 Query: 245 HILIVLLQAFIFMMLTLVYLGQAHEAH 271 HILIV LQAFIFMMLTLVY+GQAHE+H Sbjct: 247 HILIVFLQAFIFMMLTLVYIGQAHESH 273 >ref|YP_001101633.1| F0F1 ATP synthase subunit A [Herminiimonas arsenicoxydans] emb|CAL63512.1| ATP synthase F0, A chain [Herminiimonas arsenicoxydans] Length = 281 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 219/263 (83%), Positives = 243/263 (92%), Gaps = 2/263 (0%) Query: 11 SEYIVHHLGHFSSQHQDKIVDFSIINMDTIFWSVFCGVVGCLFMYLAARKATSGVPGRFQ 70 SEYIVHHLGHFS++HQDKIVDFSIINMDTIFWSVF GVVGC FM+LAARKATSGVPGRFQ Sbjct: 19 SEYIVHHLGHFSTKHQDKIVDFSIINMDTIFWSVFAGVVGCFFMWLAARKATSGVPGRFQ 78 Query: 71 AFVEMVVEMVEDQSKAIVHGDRTFIAPLALTVFVWVALMNSLDFLPVDLVSGIMRLAGLE 130 A VEMVVEMV++Q+K+IVHGDR+FIAPLALTVFVWVALMNSLDFLPVD+ S + + G++ Sbjct: 79 AAVEMVVEMVDNQAKSIVHGDRSFIAPLALTVFVWVALMNSLDFLPVDMFSALFQAVGID 138 Query: 131 EI--HHRIVPTADLNGTLGIALGVLALMLYYSFKIKGAGGFIHELFAAPFGIWLAPFNLL 188 I +HR VPTADLNGT+GIALGV ALM++Y+ KIKGAGGF+ ELFAAPFGIWLAPFNLL Sbjct: 139 HIIPYHRAVPTADLNGTMGIALGVFALMIFYNIKIKGAGGFVRELFAAPFGIWLAPFNLL 198 Query: 189 LNIIEFAAKTVSLGMRLFGNMYAGELLFLLIALLGSAATAFGFVGHVIAGSIWAIFHILI 248 LN+IEFAAKTVSL MRLFGNMYAGELLFLLIALLGS ATAFGF GHV+AG++WAIFHILI Sbjct: 199 LNMIEFAAKTVSLAMRLFGNMYAGELLFLLIALLGSTATAFGFFGHVLAGTLWAIFHILI 258 Query: 249 VLLQAFIFMMLTLVYLGQAHEAH 271 V LQAFIFMMLTLVY+GQAHE H Sbjct: 259 VFLQAFIFMMLTLVYIGQAHEGH 281 >ref|YP_004755042.1| ATP synthase subunit A [Collimonas fungivorans Ter331] gb|AEK64219.1| ATP synthase A chain [Collimonas fungivorans Ter331] Length = 274 Score = 427 bits (1099), Expect = e-118, Method: Compositional matrix adjust. Identities = 230/271 (84%), Positives = 249/271 (91%), Gaps = 2/271 (0%) Query: 3 AAAHAPTASEYIVHHLGHFSSQHQDKIVDFSIINMDTIFWSVFCGVVGCLFMYLAARKAT 62 A++ A T SEYIVHHLGHFS+ HQ KIVDFSIIN+DTIFWSVF GVVGCL MYLAARKAT Sbjct: 4 ASSDALTPSEYIVHHLGHFSTGHQSKIVDFSIINIDTIFWSVFAGVVGCLLMYLAARKAT 63 Query: 63 SGVPGRFQAFVEMVVEMVEDQSKAIVHGDRTFIAPLALTVFVWVALMNSLDFLPVDLVSG 122 +GVPGRFQAFVEMVVEMV+DQ+K IVHGDR+FIAPLALTVF+WVALMNSLDFLPVDL S Sbjct: 64 AGVPGRFQAFVEMVVEMVDDQAKGIVHGDRSFIAPLALTVFIWVALMNSLDFLPVDLFST 123 Query: 123 IMRLAGLEEI--HHRIVPTADLNGTLGIALGVLALMLYYSFKIKGAGGFIHELFAAPFGI 180 ++ GL+ + HHR+VPTADLNGT+GIALGVL LMLYYSFKIKG GGF+HEL AAPFGI Sbjct: 124 FFKMVGLDGLISHHRVVPTADLNGTMGIALGVLVLMLYYSFKIKGFGGFLHELVAAPFGI 183 Query: 181 WLAPFNLLLNIIEFAAKTVSLGMRLFGNMYAGELLFLLIALLGSAATAFGFVGHVIAGSI 240 WLAP NLLLN+IEFAAKTVSL MRLFGNMYAGELLFLLIALLGS ATAFGFVGHV+AGSI Sbjct: 184 WLAPANLLLNLIEFAAKTVSLAMRLFGNMYAGELLFLLIALLGSTATAFGFVGHVVAGSI 243 Query: 241 WAIFHILIVLLQAFIFMMLTLVYLGQAHEAH 271 WAIFHILIVLLQAFIFMMLTLVY+GQAHEAH Sbjct: 244 WAIFHILIVLLQAFIFMMLTLVYIGQAHEAH 274 >ref|ZP_04579828.1| F0F1 ATP synthase subunit A [Oxalobacter formigenes OXCC13] gb|EEO30801.1| F0F1 ATP synthase subunit A [Oxalobacter formigenes OXCC13] Length = 278 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 189/278 (67%), Positives = 226/278 (81%), Gaps = 7/278 (2%) Query: 1 MTAAAHAPTASEYIVHHLGHFSSQHQDKIVDFSIINMDTIFWSVFCGVVGCLFMYLAARK 60 M+A AHAP+ +EY+ HHL +F + HQDKIVDFSIIN+DT+FWSVFCG + C+FMY+ ARK Sbjct: 1 MSADAHAPSLAEYVTHHLQNFGTSHQDKIVDFSIINLDTVFWSVFCGALACIFMYIVARK 60 Query: 61 ATSGVPGRFQAFVEMVVEMVEDQSKAIVHGDRTFIAPLALTVFVWVALMNSLDFLPVDLV 120 ATSG P R Q+ +EM+VEM + QSKA +HGDR FIAPLALT+FVW++LMN LDFLPVDL Sbjct: 61 ATSGKPNRVQSILEMLVEMADTQSKAQIHGDRRFIAPLALTIFVWISLMNCLDFLPVDLF 120 Query: 121 SGIMRLAGLEEI--HHRIVPTADLNGTLGIALGVLALMLYYSFKIKGAGGFIHELFAAPF 178 + GL + +HR+VPTADLNGT+GI+LGV+ LM Y+ K+KG GFIHELFAAPF Sbjct: 121 GQAFKWLGLSDTIPYHRVVPTADLNGTVGISLGVVVLMFYFGIKVKGLKGFIHELFAAPF 180 Query: 179 GIWLAPFNLLLNIIEFAAKTVSLGMRLFGNMYAGELLFLLIALLGSAAT-----AFGFVG 233 GIWLAPFN LNIIE+ AK +SL MRL+GNMYAGELLFL+IA+LG+ A F FVG Sbjct: 181 GIWLAPFNFALNIIEYIAKIISLAMRLWGNMYAGELLFLMIAMLGAYAAMSLGGGFLFVG 240 Query: 234 HVIAGSIWAIFHILIVLLQAFIFMMLTLVYLGQAHEAH 271 H+IAG+IWAIFHILIV LQAFIFM+LTLVYLG AHE H Sbjct: 241 HLIAGTIWAIFHILIVFLQAFIFMILTLVYLGLAHEGH 278