BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0282.p (453 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004755036.1| ATP synthase subunit beta [Collimonas fungiv... 914 0.0 ref|YP_003777738.1| F0F1-type ATP synthase subunit beta [Herbasp... 886 0.0 ref|YP_001101627.1| F0F1 ATP synthase subunit beta [Herminiimona... 881 0.0 ref|YP_001355317.1| F0F1 ATP synthase subunit beta [Janthinobact... 879 0.0 ref|YP_968753.1| F0F1 ATP synthase subunit beta [Acidovorax citr... 835 0.0 >ref|YP_004755036.1| ATP synthase subunit beta [Collimonas fungivorans Ter331] gb|AEK64213.1| ATP synthase beta chain [Collimonas fungivorans Ter331] Length = 466 Score = 914 bits (2362), Expect = 0.0, Method: Compositional matrix adjust. Identities = 448/452 (99%), Positives = 448/452 (99%) Query: 1 VDVEFPRDAMPKIYDALKMDGSELTLEVQQQLGDGVVRTIALGTSDGLRRGMAIKNTGQP 60 VDVEFPRDAMPKIYDALKMDGSELTLEVQQQLGDGVVRTIALGTSDGLRRGM IKNTGQP Sbjct: 14 VDVEFPRDAMPKIYDALKMDGSELTLEVQQQLGDGVVRTIALGTSDGLRRGMTIKNTGQP 73 Query: 61 IMVPTGKATLGRIMDVLGNPIDECGPVSHATTASIHRKAPAYDELSPSQELLETGIKVID 120 IMVPTGKATLGRIMDVLGNPIDECGPVSH TTASIHRKAPAYDELSPSQELLETGIKVID Sbjct: 74 IMVPTGKATLGRIMDVLGNPIDECGPVSHETTASIHRKAPAYDELSPSQELLETGIKVID 133 Query: 121 LVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMA 180 LVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMA Sbjct: 134 LVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMA 193 Query: 181 DAKVVDLETPENSKVAMVYGQMNEPPGNRLRVALTGLTIAEGFRDEGKDVLFFVDNIYRY 240 DAKVVDLE PE SKVAMVYGQMNEPPGNRLRVALTGLTIAEGFRDEGKDVLFFVDNIYRY Sbjct: 194 DAKVVDLENPEKSKVAMVYGQMNEPPGNRLRVALTGLTIAEGFRDEGKDVLFFVDNIYRY 253 Query: 241 TLAGTEVSALLGRMPSAVGYQPTLASEMGQLQERITSTKTGSITSIQAVYVPADDLTDPS 300 TLAGTEVSALLGRMPSAVGYQPTLASEMGQLQERITSTKTGSITSIQAVYVPADDLTDPS Sbjct: 254 TLAGTEVSALLGRMPSAVGYQPTLASEMGQLQERITSTKTGSITSIQAVYVPADDLTDPS 313 Query: 301 PATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPQVVGQEHYETARAVQGILQRY 360 PATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPQVVGQEHYETARAVQGILQRY Sbjct: 314 PATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPQVVGQEHYETARAVQGILQRY 373 Query: 361 KELRDIIAILGMDELAPEDKLLVARARKMQRFLSQPFHVAEVFTGSPGKYVSLKDTIKGF 420 KELRDIIAILGMDELAPEDKLLVARARKMQRFLSQPFHVAEVFTGSPGKYVSLKDTIKGF Sbjct: 374 KELRDIIAILGMDELAPEDKLLVARARKMQRFLSQPFHVAEVFTGSPGKYVSLKDTIKGF 433 Query: 421 KMIASGELDHLPEQAFYMVGTIEEAIEKAKKI 452 KMIASGELDHLPEQAFYMVGTIEEAIEKAKKI Sbjct: 434 KMIASGELDHLPEQAFYMVGTIEEAIEKAKKI 465 >ref|YP_003777738.1| F0F1-type ATP synthase subunit beta [Herbaspirillum seropedicae SmR1] emb|CAM32670.1| F0F1-type ATP synthase, beta subunit protein [Herbaspirillum seropedicae] gb|ADJ65830.1| F0F1-type ATP synthase, beta subunit protein [Herbaspirillum seropedicae SmR1] Length = 466 Score = 886 bits (2290), Expect = 0.0, Method: Compositional matrix adjust. Identities = 431/453 (95%), Positives = 442/453 (97%) Query: 1 VDVEFPRDAMPKIYDALKMDGSELTLEVQQQLGDGVVRTIALGTSDGLRRGMAIKNTGQP 60 VDVEFPRDAMPK+YDALK++GS+LTLEVQQQLGDGVVRTIALG+SDGLRRG+ I NTG+P Sbjct: 14 VDVEFPRDAMPKVYDALKLEGSDLTLEVQQQLGDGVVRTIALGSSDGLRRGLTISNTGKP 73 Query: 61 IMVPTGKATLGRIMDVLGNPIDECGPVSHATTASIHRKAPAYDELSPSQELLETGIKVID 120 I VP G ATLGRIMDVLGNPIDECGPVSH TASIHRKAPAYDELSPSQELLETGIKVID Sbjct: 74 ITVPVGTATLGRIMDVLGNPIDECGPVSHEQTASIHRKAPAYDELSPSQELLETGIKVID 133 Query: 121 LVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMA 180 LVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMA Sbjct: 134 LVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMA 193 Query: 181 DAKVVDLETPENSKVAMVYGQMNEPPGNRLRVALTGLTIAEGFRDEGKDVLFFVDNIYRY 240 +AKVVDLE P NSKVAMVYGQMNEPPGNRLRVALTGLTIAEGFRDEGKDVLFFVDNIYRY Sbjct: 194 EAKVVDLENPTNSKVAMVYGQMNEPPGNRLRVALTGLTIAEGFRDEGKDVLFFVDNIYRY 253 Query: 241 TLAGTEVSALLGRMPSAVGYQPTLASEMGQLQERITSTKTGSITSIQAVYVPADDLTDPS 300 TLAGTEVSALLGRMPSAVGYQPTLA EMG+LQERITSTKTGSITSIQAVYVPADDLTDPS Sbjct: 254 TLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTKTGSITSIQAVYVPADDLTDPS 313 Query: 301 PATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPQVVGQEHYETARAVQGILQRY 360 PATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPQVVGQEHYETARAVQG LQRY Sbjct: 314 PATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPQVVGQEHYETARAVQGTLQRY 373 Query: 361 KELRDIIAILGMDELAPEDKLLVARARKMQRFLSQPFHVAEVFTGSPGKYVSLKDTIKGF 420 KELRDIIAILGMDELAPEDKL+VARARKMQRFLSQPFHVAEVFTGSPGKYVSLKDTIKGF Sbjct: 374 KELRDIIAILGMDELAPEDKLIVARARKMQRFLSQPFHVAEVFTGSPGKYVSLKDTIKGF 433 Query: 421 KMIASGELDHLPEQAFYMVGTIEEAIEKAKKIN 453 KMIASGELDHLPEQAFYMVGTI+EAIEKAKKIN Sbjct: 434 KMIASGELDHLPEQAFYMVGTIDEAIEKAKKIN 466 >ref|YP_001101627.1| F0F1 ATP synthase subunit beta [Herminiimonas arsenicoxydans] sp|A4GAG9.1|ATPB_HERAR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta emb|CAL63506.1| ATP synthase subunit beta (ATPase subunit beta) (ATP synthase F1 sector subunit beta) [Herminiimonas arsenicoxydans] Length = 466 Score = 881 bits (2276), Expect = 0.0, Method: Compositional matrix adjust. Identities = 429/453 (94%), Positives = 440/453 (97%) Query: 1 VDVEFPRDAMPKIYDALKMDGSELTLEVQQQLGDGVVRTIALGTSDGLRRGMAIKNTGQP 60 VDVEFPR+AMPKIYDALKM GSELTLEVQQQLGDG+VRTIALGTSDGLRRGM I+NTG P Sbjct: 14 VDVEFPRNAMPKIYDALKMAGSELTLEVQQQLGDGIVRTIALGTSDGLRRGMIIQNTGNP 73 Query: 61 IMVPTGKATLGRIMDVLGNPIDECGPVSHATTASIHRKAPAYDELSPSQELLETGIKVID 120 I VP GKATLGRIMDVLGNPIDECGPVSH TASIHRKAPAYDELSPSQ+LLETGIKVID Sbjct: 74 ITVPVGKATLGRIMDVLGNPIDECGPVSHERTASIHRKAPAYDELSPSQDLLETGIKVID 133 Query: 121 LVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMA 180 LVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMA Sbjct: 134 LVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMA 193 Query: 181 DAKVVDLETPENSKVAMVYGQMNEPPGNRLRVALTGLTIAEGFRDEGKDVLFFVDNIYRY 240 DAKVVDLE PENSKVAMVYGQMNEPPGNRLRVALTGLT+AE FRDEGKDVLFFVDNIYR+ Sbjct: 194 DAKVVDLENPENSKVAMVYGQMNEPPGNRLRVALTGLTMAEAFRDEGKDVLFFVDNIYRF 253 Query: 241 TLAGTEVSALLGRMPSAVGYQPTLASEMGQLQERITSTKTGSITSIQAVYVPADDLTDPS 300 TLAGTEVSALLGRMPSAVGYQPTLA EMG+LQERITSTKTGSITSIQAVYVPADDLTDPS Sbjct: 254 TLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTKTGSITSIQAVYVPADDLTDPS 313 Query: 301 PATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPQVVGQEHYETARAVQGILQRY 360 PATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDP VVGQ+HY+TARAVQG LQRY Sbjct: 314 PATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGQDHYDTARAVQGTLQRY 373 Query: 361 KELRDIIAILGMDELAPEDKLLVARARKMQRFLSQPFHVAEVFTGSPGKYVSLKDTIKGF 420 KELRDIIAILGMDELAPEDKLLVARARKMQRFLSQPFHVAEVFTG+PGKYVSLKDTI GF Sbjct: 374 KELRDIIAILGMDELAPEDKLLVARARKMQRFLSQPFHVAEVFTGAPGKYVSLKDTINGF 433 Query: 421 KMIASGELDHLPEQAFYMVGTIEEAIEKAKKIN 453 KMIASGELDHLPEQAFYMVGTIEEAIEKAKK+N Sbjct: 434 KMIASGELDHLPEQAFYMVGTIEEAIEKAKKLN 466 >ref|YP_001355317.1| F0F1 ATP synthase subunit beta [Janthinobacterium sp. Marseille] sp|A6T470.1|ATPB_JANMA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gb|ABR88891.1| F-type H+-transporting ATPase beta chain [Janthinobacterium sp. Marseille] Length = 466 Score = 879 bits (2270), Expect = 0.0, Method: Compositional matrix adjust. Identities = 428/453 (94%), Positives = 439/453 (96%) Query: 1 VDVEFPRDAMPKIYDALKMDGSELTLEVQQQLGDGVVRTIALGTSDGLRRGMAIKNTGQP 60 VDVEFPR+AMPKIYDALKM GSELTLEVQQQLGDG+VRTIALGTSDGLRRGM I+NTG P Sbjct: 14 VDVEFPRNAMPKIYDALKMAGSELTLEVQQQLGDGIVRTIALGTSDGLRRGMIIQNTGNP 73 Query: 61 IMVPTGKATLGRIMDVLGNPIDECGPVSHATTASIHRKAPAYDELSPSQELLETGIKVID 120 I VP G ATLGRIMDVLGNPIDECGPVSH TASIHRKAPAYDELSPSQ+LLETGIKVID Sbjct: 74 ITVPVGTATLGRIMDVLGNPIDECGPVSHERTASIHRKAPAYDELSPSQDLLETGIKVID 133 Query: 121 LVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMA 180 LVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMA Sbjct: 134 LVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMA 193 Query: 181 DAKVVDLETPENSKVAMVYGQMNEPPGNRLRVALTGLTIAEGFRDEGKDVLFFVDNIYRY 240 DAKVVDLE P NSKVAMVYGQMNEPPGNRLRVALTGLT+AE FRDEGKDVLFFVDNIYR+ Sbjct: 194 DAKVVDLENPANSKVAMVYGQMNEPPGNRLRVALTGLTMAEAFRDEGKDVLFFVDNIYRF 253 Query: 241 TLAGTEVSALLGRMPSAVGYQPTLASEMGQLQERITSTKTGSITSIQAVYVPADDLTDPS 300 TLAGTEVSALLGRMPSAVGYQPTLA EMG+LQERITSTKTGSITSIQAVYVPADDLTDPS Sbjct: 254 TLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTKTGSITSIQAVYVPADDLTDPS 313 Query: 301 PATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPQVVGQEHYETARAVQGILQRY 360 PATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDP VVGQ+HY+TARAVQG LQRY Sbjct: 314 PATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGQDHYDTARAVQGTLQRY 373 Query: 361 KELRDIIAILGMDELAPEDKLLVARARKMQRFLSQPFHVAEVFTGSPGKYVSLKDTIKGF 420 KELRDIIAILGMDELAPEDKLLVARARKMQRFLSQPFHVAEVFTG+PGKYVSLKDTIKGF Sbjct: 374 KELRDIIAILGMDELAPEDKLLVARARKMQRFLSQPFHVAEVFTGAPGKYVSLKDTIKGF 433 Query: 421 KMIASGELDHLPEQAFYMVGTIEEAIEKAKKIN 453 KMIASGELDHLPEQAFYMVGTIEEAIEKAKK+N Sbjct: 434 KMIASGELDHLPEQAFYMVGTIEEAIEKAKKLN 466 >ref|YP_968753.1| F0F1 ATP synthase subunit beta [Acidovorax citrulli AAC00-1] ref|YP_004232932.1| ATP synthase subunit beta [Acidovorax avenae subsp. avenae ATCC 19860] sp|A1TJ41.1|ATPB_ACIAC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gb|ABM30979.1| ATP synthase F1 subcomplex beta subunit [Acidovorax citrulli AAC00-1] gb|ADX44365.1| ATP synthase subunit beta [Acidovorax avenae subsp. avenae ATCC 19860] Length = 476 Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/452 (89%), Positives = 426/452 (94%) Query: 1 VDVEFPRDAMPKIYDALKMDGSELTLEVQQQLGDGVVRTIALGTSDGLRRGMAIKNTGQP 60 VDVEFPRD MPK+YDALK++GS LTLEVQQQLGDGVVRTIALG+SDGLRRG+ + NTG P Sbjct: 24 VDVEFPRDQMPKVYDALKLEGSPLTLEVQQQLGDGVVRTIALGSSDGLRRGLMVSNTGNP 83 Query: 61 IMVPTGKATLGRIMDVLGNPIDECGPVSHATTASIHRKAPAYDELSPSQELLETGIKVID 120 I VP GKATLGRIMDVLG+PIDE GPVS TASIHRKAPAYDELSPSQELLETGIKVID Sbjct: 84 ITVPVGKATLGRIMDVLGSPIDERGPVSQELTASIHRKAPAYDELSPSQELLETGIKVID 143 Query: 121 LVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMA 180 LVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMA Sbjct: 144 LVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMA 203 Query: 181 DAKVVDLETPENSKVAMVYGQMNEPPGNRLRVALTGLTIAEGFRDEGKDVLFFVDNIYRY 240 D+ VV+LE E+SKVAMVYGQMNEPPGNRLRVALTGLTIAE FRDEG+DVLFFVDNIYRY Sbjct: 204 DSGVVNLEKLEDSKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYRY 263 Query: 241 TLAGTEVSALLGRMPSAVGYQPTLASEMGQLQERITSTKTGSITSIQAVYVPADDLTDPS 300 TLAGTEVSALLGRMPSAVGYQPTLA EMG+LQERITSTK GSITSIQAVYVPADDLTDPS Sbjct: 264 TLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTKVGSITSIQAVYVPADDLTDPS 323 Query: 301 PATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPQVVGQEHYETARAVQGILQRY 360 PATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPQVVG+EHY+ AR VQG LQRY Sbjct: 324 PATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPQVVGEEHYQVARGVQGTLQRY 383 Query: 361 KELRDIIAILGMDELAPEDKLLVARARKMQRFLSQPFHVAEVFTGSPGKYVSLKDTIKGF 420 KELRDIIAILGMDELAPEDKL VARARK+QRFLSQPFHVAEVFTGSPGKYV L +TI+GF Sbjct: 384 KELRDIIAILGMDELAPEDKLAVARARKIQRFLSQPFHVAEVFTGSPGKYVPLAETIRGF 443 Query: 421 KMIASGELDHLPEQAFYMVGTIEEAIEKAKKI 452 KMI +GE DHLPEQAFYMVGTI+EA EKAKK+ Sbjct: 444 KMIVAGECDHLPEQAFYMVGTIDEAFEKAKKV 475