BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0276.p (261 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777734.1| arogenate dehydratase [Herbaspirillum serope... 387 e-105 ref|YP_004755029.1| cyclohexadienyl dehydratase [Collimonas fung... 384 e-104 ref|YP_001859240.1| arogenate dehydratase [Burkholderia phymatum... 342 3e-92 ref|YP_004229991.1| arogenate dehydratase [Burkholderia sp. CCGE... 333 2e-89 ref|YP_001897502.1| arogenate dehydratase [Burkholderia phytofir... 332 4e-89 >ref|YP_003777734.1| arogenate dehydratase [Herbaspirillum seropedicae SmR1] gb|ADJ65826.1| arogenate dehydratase protein [Herbaspirillum seropedicae SmR1] Length = 267 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 172/231 (74%), Positives = 204/231 (88%) Query: 30 SRLDEVIKSGKLRVCMTGDYKPFTYFKTDNTFEGMDVDLAQSLAKSLGVEVQLVKTTWTN 89 SRLD+VIK+GKLR+CMTGDYKPFTY++ D +FEGMDV+L Q+LAKSLGVE Q +KTTW+N Sbjct: 36 SRLDQVIKAGKLRICMTGDYKPFTYYRPDQSFEGMDVELGQALAKSLGVEAQFIKTTWSN 95 Query: 90 LMTDFLAKCDIAMGGVSVTLDRQKKAAFAVSHMVDGKSPIVRCADVAKFQTLEMIDKPTT 149 LM DF+A+CDIAMGGVS+TLDR +KAAF+ MVDGK+PI+RCAD KF+ +MID+P T Sbjct: 96 LMNDFIAQCDIAMGGVSITLDRARKAAFSEPTMVDGKAPIIRCADKDKFRNFDMIDQPGT 155 Query: 150 RAIFNPGGTNERFARANYKQAQLILHPDNVTIFQQIIDGKADIMVTDASETLWQAKQHPE 209 RAI NPGGTNERFARA YK+A L LHPDNVTIFQQI+DGKAD+MVTDASETLWQ+K HPE Sbjct: 156 RAIVNPGGTNERFARARYKRATLTLHPDNVTIFQQIVDGKADVMVTDASETLWQSKLHPE 215 Query: 210 LCPVHPDQPLQFSEKAFMLPRADVAFKEYVDAWMHLQKATGDYDRVLNKWL 260 LCPV PDQPLQF+EKA++LPR DVAFK YVD W+HL KATG+Y ++ +KWL Sbjct: 216 LCPVTPDQPLQFAEKAYLLPRGDVAFKAYVDTWLHLAKATGEYQQIFDKWL 266 >ref|YP_004755029.1| cyclohexadienyl dehydratase [Collimonas fungivorans Ter331] gb|AEK64206.1| Cyclohexadienyl dehydratase [Collimonas fungivorans Ter331] Length = 263 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 182/231 (78%), Positives = 206/231 (89%) Query: 30 SRLDEVIKSGKLRVCMTGDYKPFTYFKTDNTFEGMDVDLAQSLAKSLGVEVQLVKTTWTN 89 SRLDEV+KSG LRVCMTGDYKPFT+FK+DN+FEG+DVDLA+SLAK+LGVE + VKT+WTN Sbjct: 32 SRLDEVVKSGNLRVCMTGDYKPFTFFKSDNSFEGIDVDLARSLAKALGVEARFVKTSWTN 91 Query: 90 LMTDFLAKCDIAMGGVSVTLDRQKKAAFAVSHMVDGKSPIVRCADVAKFQTLEMIDKPTT 149 L DFL KCDIAMGGVSVTL+RQKK +F+ HMVDGK+ I RCAD AKFQ+L ID+P+T Sbjct: 92 LTGDFLEKCDIAMGGVSVTLERQKKVSFSAPHMVDGKAAIARCADAAKFQSLAAIDQPST 151 Query: 150 RAIFNPGGTNERFARANYKQAQLILHPDNVTIFQQIIDGKADIMVTDASETLWQAKQHPE 209 RAI NPGGTNERFARANYKQAQLILHPDNVTIF QI+ GKAD+MVTDASETLWQAK HP+ Sbjct: 152 RAIVNPGGTNERFARANYKQAQLILHPDNVTIFDQIVQGKADVMVTDASETLWQAKLHPQ 211 Query: 210 LCPVHPDQPLQFSEKAFMLPRADVAFKEYVDAWMHLQKATGDYDRVLNKWL 260 LC + P+QPLQFSEKAFMLPR DV FKE+VD WMH KATGDYDRV+N+WL Sbjct: 212 LCSIRPEQPLQFSEKAFMLPRGDVPFKEFVDTWMHQLKATGDYDRVVNQWL 262 >ref|YP_001859240.1| arogenate dehydratase [Burkholderia phymatum STM815] gb|ACC72194.1| Arogenate dehydratase [Burkholderia phymatum STM815] Length = 260 Score = 342 bits (878), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 152/253 (60%), Positives = 200/253 (79%), Gaps = 1/253 (0%) Query: 9 LLPLTLLCAG-MAMQTAGAAESSRLDEVIKSGKLRVCMTGDYKPFTYFKTDNTFEGMDVD 67 L L+CAG + QTA A +SRLDE++ G LR C TGDYKP++++K D FEG+D+D Sbjct: 7 LFVSALVCAGAVHAQTAAPAPASRLDEILARGTLRACTTGDYKPYSFYKQDGQFEGIDID 66 Query: 68 LAQSLAKSLGVEVQLVKTTWTNLMTDFLAKCDIAMGGVSVTLDRQKKAAFAVSHMVDGKS 127 + +SLA+SLGV+ + VKT+W+NLM DF++KCD+ +GGVS TLDRQK+A F V++ VDGKS Sbjct: 67 MTESLARSLGVKAEFVKTSWSNLMNDFVSKCDVGVGGVSTTLDRQKRAFFTVAYQVDGKS 126 Query: 128 PIVRCADVAKFQTLEMIDKPTTRAIFNPGGTNERFARANYKQAQLILHPDNVTIFQQIID 187 PIVRC DV K+QT+ ID+P+TR IFNPGGTNERFAR A+L ++PDNVTIF+QI+ Sbjct: 127 PIVRCDDVDKYQTVAQIDQPSTRVIFNPGGTNERFARQFLSHAKLTVYPDNVTIFKQILA 186 Query: 188 GKADIMVTDASETLWQAKQHPELCPVHPDQPLQFSEKAFMLPRADVAFKEYVDAWMHLQK 247 GKAD+MVTDASETL Q K +P LC VHPD+P Q+ EKA+++PR DV F++YVD W+HL + Sbjct: 187 GKADVMVTDASETLLQQKLNPGLCSVHPDKPFQYGEKAWLVPRGDVVFQQYVDQWLHLAR 246 Query: 248 ATGDYDRVLNKWL 260 ATG+Y + +KWL Sbjct: 247 ATGEYQSISDKWL 259 >ref|YP_004229991.1| arogenate dehydratase [Burkholderia sp. CCGE1001] gb|ADX56931.1| Arogenate dehydratase [Burkholderia sp. CCGE1001] Length = 265 Score = 333 bits (853), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 147/244 (60%), Positives = 192/244 (78%) Query: 17 AGMAMQTAGAAESSRLDEVIKSGKLRVCMTGDYKPFTYFKTDNTFEGMDVDLAQSLAKSL 76 A A + AA +SRLDE++ G LR C TGDYKP++++K D FEG+D+D+ +SLAKSL Sbjct: 21 AAQAQASGTAATASRLDEILARGTLRACTTGDYKPYSFYKADGQFEGIDIDMTESLAKSL 80 Query: 77 GVEVQLVKTTWTNLMTDFLAKCDIAMGGVSVTLDRQKKAAFAVSHMVDGKSPIVRCADVA 136 GV+ + VKT+W+NLM DF+AKCDI +GGVS TL+RQK+A F ++MVDGK+PIVRC DV Sbjct: 81 GVKAEYVKTSWSNLMNDFVAKCDIGVGGVSPTLERQKRAFFTQAYMVDGKTPIVRCDDVN 140 Query: 137 KFQTLEMIDKPTTRAIFNPGGTNERFARANYKQAQLILHPDNVTIFQQIIDGKADIMVTD 196 K+QT+ ID+P TR I NPGGTNERFA+ + A + ++PDNVTIF+QI+ GKAD+MVTD Sbjct: 141 KYQTVAQIDQPATRVIVNPGGTNERFAKQFFTHANVTVYPDNVTIFKQILAGKADVMVTD 200 Query: 197 ASETLWQAKQHPELCPVHPDQPLQFSEKAFMLPRADVAFKEYVDAWMHLQKATGDYDRVL 256 ASETL Q K +P LC VHPD+P Q+ EKA++LPR DV F++YVD W+HL +ATG+Y V Sbjct: 201 ASETLLQQKLNPGLCSVHPDKPFQYGEKAWLLPRGDVVFQQYVDQWLHLARATGEYQAVS 260 Query: 257 NKWL 260 +KWL Sbjct: 261 DKWL 264 >ref|YP_001897502.1| arogenate dehydratase [Burkholderia phytofirmans PsJN] gb|ACD18278.1| Arogenate dehydratase [Burkholderia phytofirmans PsJN] Length = 265 Score = 332 bits (851), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 148/249 (59%), Positives = 196/249 (78%), Gaps = 2/249 (0%) Query: 14 LLCAGMA--MQTAGAAESSRLDEVIKSGKLRVCMTGDYKPFTYFKTDNTFEGMDVDLAQS 71 L+ AG+A +A A SRLDE++ G LR C TGDYKP++++K D FEG+D+D+ +S Sbjct: 16 LMHAGVAGAQTSATTATPSRLDEILARGTLRACTTGDYKPYSFYKADGQFEGIDIDMTES 75 Query: 72 LAKSLGVEVQLVKTTWTNLMTDFLAKCDIAMGGVSVTLDRQKKAAFAVSHMVDGKSPIVR 131 LAKSLGV+ + +KT+W+NLM DF+AKCD+ +GGVS TL+RQK+A F ++MVDGK+PIVR Sbjct: 76 LAKSLGVKTEYIKTSWSNLMNDFVAKCDVGVGGVSPTLERQKRAFFTQAYMVDGKTPIVR 135 Query: 132 CADVAKFQTLEMIDKPTTRAIFNPGGTNERFARANYKQAQLILHPDNVTIFQQIIDGKAD 191 C DV K+QT+ ID+P TR I NPGGTNERFA+ + A L ++PDNVTIF+QI+ GKAD Sbjct: 136 CDDVNKYQTVAQIDQPATRVIVNPGGTNERFAKQYFPHANLTVYPDNVTIFKQILAGKAD 195 Query: 192 IMVTDASETLWQAKQHPELCPVHPDQPLQFSEKAFMLPRADVAFKEYVDAWMHLQKATGD 251 +MVTDASETL Q K +P LC VHPD+P Q+ EKA++LPR DVAF++YVD W+HL +ATG+ Sbjct: 196 VMVTDASETLLQQKLNPGLCSVHPDKPFQYGEKAWLLPRGDVAFQQYVDQWLHLARATGE 255 Query: 252 YDRVLNKWL 260 Y + +KWL Sbjct: 256 YQAISDKWL 264