BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0274.p (420 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004755015.1| helicase PriA [Collimonas fungivorans Ter331... 284 2e-74 ref|YP_001101607.1| primosomal protein N' [Herminiimonas arsenic... 281 2e-73 ref|YP_003777732.1| primosomal protein N' [Herbaspirillum serope... 279 7e-73 ref|YP_001355296.1| primosomal protein N' [Janthinobacterium sp.... 276 5e-72 ref|ZP_08275586.1| Helicase PriA essential for oriC/DnaA-indepen... 276 6e-72 >ref|YP_004755015.1| helicase PriA [Collimonas fungivorans Ter331] gb|AEK64192.1| Helicase PriA essential for oriC/DnaA-independent DNA replication [Collimonas fungivorans Ter331] Length = 680 Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 137/161 (85%), Positives = 150/161 (93%) Query: 1 VVSLHSGLAEGERTLSWLAAHQGQARIVLGTRLAILSSLPHLKLIVIDEEHDPSYKQQEG 60 V +LHSGLAEGER WLAAH GQARI+LGTRLA+L+SLPHLKLIVIDEEHDPSYKQQEG Sbjct: 222 VATLHSGLAEGERMRHWLAAHLGQARIILGTRLAVLASLPHLKLIVIDEEHDPSYKQQEG 281 Query: 61 LRYSARDLAVWRAHQLAIPVVLGSATPSLETWQHAQAGRYRKLQLRERAVRDAVLPKVKM 120 LRYSARDLAVWRAHQL IP+VLGSATPSLETW H Q+GRYRKL+LRERAV+DAVLP V+ Sbjct: 282 LRYSARDLAVWRAHQLGIPIVLGSATPSLETWHHTQSGRYRKLELRERAVKDAVLPLVRR 341 Query: 121 IDMERDRPNDGLTSTLVAALKLRLERGEQSLLFLNRRGYAP 161 IDMERD+P++GLTSTLV+ALK RLERGEQSLLFLNRRGYAP Sbjct: 342 IDMERDKPSEGLTSTLVSALKQRLERGEQSLLFLNRRGYAP 382 >ref|YP_001101607.1| primosomal protein N' [Herminiimonas arsenicoxydans] emb|CAL63486.1| Primosomal protein N' [Herminiimonas arsenicoxydans] Length = 682 Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 134/165 (81%), Positives = 151/165 (91%), Gaps = 4/165 (2%) Query: 1 VVSLHSGLAEGERTLSWLAAHQGQARIVLGTRLAILSSLPHLKLIVIDEEHDPSYKQQEG 60 + +LHSGLAEGER + WLAAH GQARI+LGTRLAILSSLPHLKLI++DEEHDPSYKQQEG Sbjct: 220 IATLHSGLAEGERMMHWLAAHLGQARIILGTRLAILSSLPHLKLIIVDEEHDPSYKQQEG 279 Query: 61 LRYSARDLAVWRAHQLAIPVVLGSATPSLETWQHAQAGRYRKLQLRERAVRDAVLPKVKM 120 LRYSARDLAVWRAHQL IP+VLGSATPSLETW HAQ+GRYRKL+LRERAVRDAVLPKV + Sbjct: 280 LRYSARDLAVWRAHQLNIPIVLGSATPSLETWHHAQSGRYRKLELRERAVRDAVLPKVGL 339 Query: 121 IDMERDRP----NDGLTSTLVAALKLRLERGEQSLLFLNRRGYAP 161 ID+ER P +G+++TL+AALKLR+ERGEQSLLFLNRRGYAP Sbjct: 340 IDLERKAPREQMTEGVSATLIAALKLRMERGEQSLLFLNRRGYAP 384 >ref|YP_003777732.1| primosomal protein N' [Herbaspirillum seropedicae SmR1] gb|ADJ65824.1| primosomal protein N' (replication factor Y)- superfamily II helicase protein [Herbaspirillum seropedicae SmR1] Length = 708 Score = 279 bits (713), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 136/161 (84%), Positives = 152/161 (94%) Query: 1 VVSLHSGLAEGERTLSWLAAHQGQARIVLGTRLAILSSLPHLKLIVIDEEHDPSYKQQEG 60 VV+LHSGLAEGER +WLAAH GQA+IVLGTRLAIL+SLP LKLIVIDEEHDPSYKQQEG Sbjct: 250 VVALHSGLAEGERARNWLAAHLGQAQIVLGTRLAILASLPALKLIVIDEEHDPSYKQQEG 309 Query: 61 LRYSARDLAVWRAHQLAIPVVLGSATPSLETWQHAQAGRYRKLQLRERAVRDAVLPKVKM 120 LRYSARDLAVWRAHQL IPVVLGSATPSLETWQHAQAGRYR+L+LR+RA R+AVLP VK+ Sbjct: 310 LRYSARDLAVWRAHQLGIPVVLGSATPSLETWQHAQAGRYRRLELRQRAAREAVLPTVKV 369 Query: 121 IDMERDRPNDGLTSTLVAALKLRLERGEQSLLFLNRRGYAP 161 ID+ERD+P DGLT+TL+AA++ RLE+GEQSLLFLNRRGYAP Sbjct: 370 IDLERDKPVDGLTATLIAAVRKRLEQGEQSLLFLNRRGYAP 410 >ref|YP_001355296.1| primosomal protein N' [Janthinobacterium sp. Marseille] gb|ABR88885.1| primosomal protein N' [Janthinobacterium sp. Marseille] Length = 683 Score = 276 bits (706), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 133/165 (80%), Positives = 150/165 (90%), Gaps = 4/165 (2%) Query: 1 VVSLHSGLAEGERTLSWLAAHQGQARIVLGTRLAILSSLPHLKLIVIDEEHDPSYKQQEG 60 V +LHSGLAEGER WLAAH GQARI+LGTRLAILSSLP LKLI++DEEHDPSYKQQEG Sbjct: 221 VATLHSGLAEGERMTHWLAAHLGQARIILGTRLAILSSLPQLKLIIVDEEHDPSYKQQEG 280 Query: 61 LRYSARDLAVWRAHQLAIPVVLGSATPSLETWQHAQAGRYRKLQLRERAVRDAVLPKVKM 120 LRYSARDLAVWRAHQL+IP+VLGSATPSLETW HAQ+GRYRKL+LRERAV+DAVLPKV + Sbjct: 281 LRYSARDLAVWRAHQLSIPIVLGSATPSLETWHHAQSGRYRKLELRERAVKDAVLPKVGL 340 Query: 121 IDMERDRP----NDGLTSTLVAALKLRLERGEQSLLFLNRRGYAP 161 ID+ER P +G+++TL+AALKLR+ERGEQSLLFLNRRGYAP Sbjct: 341 IDLERKAPREQMTEGISATLIAALKLRMERGEQSLLFLNRRGYAP 385 >ref|ZP_08275586.1| Helicase PriA essential for oriC/DnaA-independent DNA replication [Oxalobacteraceae bacterium IMCC9480] gb|EGF30946.1| Helicase PriA essential for oriC/DnaA-independent DNA replication [Oxalobacteraceae bacterium IMCC9480] Length = 650 Score = 276 bits (705), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 132/161 (81%), Positives = 150/161 (93%) Query: 1 VVSLHSGLAEGERTLSWLAAHQGQARIVLGTRLAILSSLPHLKLIVIDEEHDPSYKQQEG 60 VV+LHSGLAEGER +WLAAH G ARI+LGTRLA+L+S+PHLKLI+IDEEHDPSYKQQ+G Sbjct: 192 VVTLHSGLAEGERLRNWLAAHLGHARIILGTRLALLASIPHLKLIMIDEEHDPSYKQQDG 251 Query: 61 LRYSARDLAVWRAHQLAIPVVLGSATPSLETWQHAQAGRYRKLQLRERAVRDAVLPKVKM 120 LRYSARDLAVWRA QLAIP+VLGSATPSLETW HAQ+GRYR+L LR+RAVRDAVLPKV + Sbjct: 252 LRYSARDLAVWRARQLAIPLVLGSATPSLETWHHAQSGRYRQLDLRDRAVRDAVLPKVSL 311 Query: 121 IDMERDRPNDGLTSTLVAALKLRLERGEQSLLFLNRRGYAP 161 I+ME D+P +G+TSTL+ ALKLRLERGEQSLLFLNRRGYAP Sbjct: 312 INMEHDKPFEGITSTLLKALKLRLERGEQSLLFLNRRGYAP 352