BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0262.p (322 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003978603.1| inner-membrane translocator [Achromobacter x... 435 e-120 ref|YP_004126448.1| inner-membrane translocator [Alicycliphilus ... 381 e-104 ref|ZP_04760858.1| inner-membrane translocator [Acidovorax delaf... 367 1e-99 ref|YP_555751.1| branched chain amino acid ABC transporter inner... 212 5e-53 ref|YP_003405678.1| inner-membrane translocator [Haloterrigena t... 198 1e-48 >ref|YP_003978603.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gb|ADP15888.1| inner-membrane translocator 29 [Achromobacter xylosoxidans A8] Length = 338 Score = 435 bits (1118), Expect = e-120, Method: Compositional matrix adjust. Identities = 229/314 (72%), Positives = 261/314 (83%) Query: 1 MNLSRFDLVLGCLLIPVVIALPFVTHDDFYLNLATLIMIWGIFAVGFDFVFGSLGMVSFG 60 M SR D + + VIA+PF T +DF LNL+ LIM+W IFAVGFD VFG LGMVSFG Sbjct: 1 MTTSRQDAAIAAGVAAAVIAVPFCTQNDFLLNLSILIMVWSIFAVGFDLVFGLLGMVSFG 60 Query: 61 HASFLGIGGYAVALATQRLGLPFEAGVVLAMAAAAACAWLYSFFALRVSGIFFALVTLSL 120 HA+FLG GGYA+ALATQR GLPFEAG+ LA+ A AACAW++S FALRVSGIFFALVTL+L Sbjct: 61 HAAFLGTGGYALALATQRYGLPFEAGLALAIVAGAACAWIFSVFALRVSGIFFALVTLAL 120 Query: 121 SQLLYILADSKLREWTGGADGLPGVARPATFGIDFFDPVNFYWYAAVVFALVMIAIAVLR 180 SQL+YILADSKLREWTGGADGLPG+ RP GIDFFD VNFYWY A +FALVM +A+LR Sbjct: 121 SQLMYILADSKLREWTGGADGLPGIGRPELAGIDFFDTVNFYWYVAAIFALVMALMAMLR 180 Query: 181 SSPFGRVVMAIQQNEIRTDHLGYNTHRIKQITFLISGAISGLAGALLGSLMMYVNPQMLH 240 +SPFGR V ++QNEIR LGYN R+KQITFL+SGA+ GLAG LL +++MY+NPQMLH Sbjct: 181 ASPFGRAVAGVRQNEIRAAQLGYNVQRLKQITFLVSGAVGGLAGGLLAAVLMYMNPQMLH 240 Query: 241 WGTSGDVIIMTLLGGAGTLWGPVAGVAIFEILKESLSGWTQYWYGILGVVFILATLYFPR 300 W TSGDVIIMTLLGGAGTLWGPVAGV +FE LKE LSGWT YWYGILG+VFILATLYFP+ Sbjct: 241 WTTSGDVIIMTLLGGAGTLWGPVAGVLLFEALKEWLSGWTPYWYGILGLVFILATLYFPQ 300 Query: 301 GVLGEIQARLVRTR 314 GVLG +QAR R R Sbjct: 301 GVLGALQARWGRQR 314 >ref|YP_004126448.1| inner-membrane translocator [Alicycliphilus denitrificans BC] ref|YP_004388942.1| ABC transporter integral membrane subunit [Alicycliphilus denitrificans K601] gb|ADU99560.1| inner-membrane translocator [Alicycliphilus denitrificans BC] gb|AEB85426.1| ABC-type transporter, integral membrane subunit [Alicycliphilus denitrificans K601] Length = 322 Score = 381 bits (979), Expect = e-104, Method: Compositional matrix adjust. Identities = 208/319 (65%), Positives = 254/319 (79%) Query: 1 MNLSRFDLVLGCLLIPVVIALPFVTHDDFYLNLATLIMIWGIFAVGFDFVFGSLGMVSFG 60 M LS FD+ G LL I LPF+ + + L TL IW IFA+GFDFVFG+LGMVSFG Sbjct: 1 MKLSLFDICFGLLLAAAGILLPFLHPGEALIQLVTLAAIWAIFAIGFDFVFGALGMVSFG 60 Query: 61 HASFLGIGGYAVALATQRLGLPFEAGVVLAMAAAAACAWLYSFFALRVSGIFFALVTLSL 120 HA+FLG+GGYAVALATQ+ GLPF AGV LA+ AA A L+SFFALRVSGIFFALVTL+L Sbjct: 61 HATFLGVGGYAVALATQKYGLPFSAGVGLAVIVGAAFALLFSFFALRVSGIFFALVTLAL 120 Query: 121 SQLLYILADSKLREWTGGADGLPGVARPATFGIDFFDPVNFYWYAAVVFALVMIAIAVLR 180 SQL++ILADSKLR +TGG+DG+ GV RP GIDF+DPV++YW+ V+ALVM+A+ LR Sbjct: 121 SQLIFILADSKLRGFTGGSDGISGVERPGFLGIDFYDPVHYYWFVLGVYALVMLAVISLR 180 Query: 181 SSPFGRVVMAIQQNEIRTDHLGYNTHRIKQITFLISGAISGLAGALLGSLMMYVNPQMLH 240 SSPFGRV+ AI+ NE R D LG+N +R KQITF+ISG +SGLAGALL SL+MY+NPQMLH Sbjct: 181 SSPFGRVIAAIRGNETRADQLGFNVNRYKQITFVISGGLSGLAGALLASLLMYMNPQMLH 240 Query: 241 WGTSGDVIIMTLLGGAGTLWGPVAGVAIFEILKESLSGWTQYWYGILGVVFILATLYFPR 300 W TSGDVIIMTL+GG+G+LWG GV FE+LKE LS WT+YWYG+LG+VFILAT++FPR Sbjct: 241 WTTSGDVIIMTLVGGSGSLWGATVGVIAFEVLKEWLSSWTEYWYGVLGLVFILATIFFPR 300 Query: 301 GVLGEIQARLVRTRPGRSG 319 G++GE++ + R G Sbjct: 301 GIVGELEKGFAAYQKNRRG 319 >ref|ZP_04760858.1| inner-membrane translocator [Acidovorax delafieldii 2AN] gb|EER62405.1| inner-membrane translocator [Acidovorax delafieldii 2AN] Length = 322 Score = 367 bits (943), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 209/319 (65%), Positives = 252/319 (78%) Query: 1 MNLSRFDLVLGCLLIPVVIALPFVTHDDFYLNLATLIMIWGIFAVGFDFVFGSLGMVSFG 60 M LSRFD+ G LL I LP + + + L TL IW +FAVGFDFVFGSLGMVSFG Sbjct: 1 MKLSRFDIYFGILLAVAGILLPLLRPGEALIQLVTLAAIWAVFAVGFDFVFGSLGMVSFG 60 Query: 61 HASFLGIGGYAVALATQRLGLPFEAGVVLAMAAAAACAWLYSFFALRVSGIFFALVTLSL 120 HA+FLG+GGYAVALATQ+ GLPF G +A+A AA A +SFFALRVSGIFFALVTL+L Sbjct: 61 HATFLGVGGYAVALATQKYGLPFFCGAGIAIAVGAAFALFFSFFALRVSGIFFALVTLAL 120 Query: 121 SQLLYILADSKLREWTGGADGLPGVARPATFGIDFFDPVNFYWYAAVVFALVMIAIAVLR 180 SQL++ILADSKLR +TGG+DG+ GV RP GIDF+DP+NFYW+ V+ALVM+A+ LR Sbjct: 121 SQLIFILADSKLRGFTGGSDGISGVERPGFLGIDFYDPINFYWFVLGVYALVMLAVISLR 180 Query: 181 SSPFGRVVMAIQQNEIRTDHLGYNTHRIKQITFLISGAISGLAGALLGSLMMYVNPQMLH 240 SSPFGR + AI+ NE R D LG+N +R KQITF+ISGA+SGLAGALL SL+MY+NPQMLH Sbjct: 181 SSPFGRAIAAIRSNETRADQLGFNVNRYKQITFVISGALSGLAGALLASLLMYMNPQMLH 240 Query: 241 WGTSGDVIIMTLLGGAGTLWGPVAGVAIFEILKESLSGWTQYWYGILGVVFILATLYFPR 300 W TSGDVIIMTLLGG+G+LWG GV +FEILKE LS WT+YWYG+LG VFILAT++FPR Sbjct: 241 WTTSGDVIIMTLLGGSGSLWGATVGVIVFEILKEWLSSWTEYWYGVLGTVFILATIFFPR 300 Query: 301 GVLGEIQARLVRTRPGRSG 319 G++GE++ + R G Sbjct: 301 GIVGELEKGFAAYQNNRRG 319 >ref|YP_555751.1| branched chain amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gb|ABE36401.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Burkholderia xenovorans LB400] Length = 314 Score = 212 bits (540), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 125/288 (43%), Positives = 181/288 (62%) Query: 17 VVIALPFVTHDDFYLNLATLIMIWGIFAVGFDFVFGSLGMVSFGHASFLGIGGYAVALAT 76 + I ++ D L L+++W I A+G+D VFG G++SFGHA+FLG G YAVA+ T Sbjct: 16 IAIGFQYLRGDGGAAFLVGLMLVWAIAALGYDLVFGLSGLLSFGHAAFLGSGAYAVAILT 75 Query: 77 QRLGLPFEAGVVLAMAAAAACAWLYSFFALRVSGIFFALVTLSLSQLLYILADSKLREWT 136 + LPF + ++ A A ++ ALR SGI+ L+TL+L+QL IL +L+ T Sbjct: 76 TQWMLPFPVALFISAVLGALLALVFGAAALRASGIYCGLLTLALAQLTNILLTVRLQGLT 135 Query: 137 GGADGLPGVARPATFGIDFFDPVNFYWYAAVVFALVMIAIAVLRSSPFGRVVMAIQQNEI 196 GG DG+ GV+RP + D +N+ Y +F + A+LR SPFG+V+ A QNE+ Sbjct: 136 GGDDGISGVSRPIKYLQFLTDDLNYVVYVGCIFLGALALSALLRLSPFGQVLRAASQNEV 195 Query: 197 RTDHLGYNTHRIKQITFLISGAISGLAGALLGSLMMYVNPQMLHWGTSGDVIIMTLLGGA 256 R + LG+N R + F +SGA +G+AG L+ L + PQ++ W SGD+IIMTLLGG Sbjct: 196 RAEQLGWNVRRYRLAIFAVSGAYTGIAGGLIAGLTQFAGPQLMQWSNSGDLIIMTLLGGR 255 Query: 257 GTLWGPVAGVAIFEILKESLSGWTQYWYGILGVVFILATLYFPRGVLG 304 +L GPV GV + +L+E + +T++W GILGVVF+L TLY P GV+G Sbjct: 256 DSLLGPVVGVVLTILLREVVGSYTEHWAGILGVVFVLCTLYMPVGVIG 303 >ref|YP_003405678.1| inner-membrane translocator [Haloterrigena turkmenica DSM 5511] gb|ADB63005.1| inner-membrane translocator [Haloterrigena turkmenica DSM 5511] Length = 358 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 112/287 (39%), Positives = 167/287 (58%), Gaps = 8/287 (2%) Query: 27 DDFYLNLATLIMIWGIFAVGFDFVFGSLGMVSFGHASFLGIGGYAVALATQRLGLPFEAG 86 F+LNL ++ + + A+ DFVFG G++SFGHA+ G GGYA AL + Sbjct: 46 QPFWLNLLVRMLTFALLALSLDFVFGYAGLLSFGHAAMYGAGGYAAALLVTEVTASALVV 105 Query: 87 VVLAMAAAAACAWLYSFFALRVSGIFFALVTLSLSQLLYILADSKL-------REWTGGA 139 + LA+ A + + ++R GI+FA++TL+ +Q+LY++A + L TGG Sbjct: 106 LPLAVVTGVIVATIIGWLSVRARGIYFAMLTLAFAQMLYVVAFTDLPATIAGMETVTGGD 165 Query: 140 DGLPGVARPATFGIDFFDPVNFYWYAAVVFALVMIAIAVLRSSPFGRVVMAIQQNEIRTD 199 +GL G+ FGIDF + +N+Y+ + AL + I L +SPFGRV+ I++NE RT+ Sbjct: 166 NGLYGIQLYELFGIDFRERLNYYYLTLGIVALSLAGIVRLANSPFGRVLQGIRENEERTE 225 Query: 200 HLGYNTHRIKQITFLISGAISGLAGALLGSLMMYVNPQMLHWGTSGDVIIMTLLGGAGTL 259 +GY+ R K I F ISG + LAGAL NPQ+LHW SG++++M LLGG GT Sbjct: 226 FIGYDVQRYKVIAFAISGGFASLAGALYVPFQSVANPQLLHWTVSGELVVMVLLGGMGTF 285 Query: 260 WGPVAGVAIFEILKESLSGWTQYWYGILGVVFILATLYFPRGVLGEI 306 WGP+ G + L++ L G W ILG +F+ ++ PRG+ G I Sbjct: 286 WGPMLGAGLVVFLEDRL-GSVASWEVILGSLFVAVVVFAPRGLAGSI 331