BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0259.p (407 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003978600.1| acetyl-CoA C-acyltransferase [Achromobacter ... 644 0.0 ref|YP_001629723.1| putative thiolase [Bordetella petrii DSM 128... 451 e-125 ref|YP_525423.1| thiolase [Rhodoferax ferrireducens T118] >gi|89... 448 e-124 ref|ZP_01000051.1| Thiolase [Oceanicola batsensis HTCC2597] >gi|... 436 e-120 ref|YP_002232760.1| putative thiolase [Burkholderia cenocepacia ... 429 e-118 >ref|YP_003978600.1| acetyl-CoA C-acyltransferase [Achromobacter xylosoxidans A8] gb|ADP15885.1| acetyl-CoA C-acyltransferase [Achromobacter xylosoxidans A8] Length = 412 Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust. Identities = 313/393 (79%), Positives = 347/393 (88%), Gaps = 4/393 (1%) Query: 1 MSHSKTYIVGVGITAFAKQLDTSVKELVRQAVSAALKDAGCESDVLQGAYFATAGQGAIE 60 MS+ TYI GVGIT F KQ SVK+LVR AV+ AL DAGC++ LQ AYFATAGQG+IE Sbjct: 1 MSNDTTYIAGVGITRFDKQPAKSVKDLVRDAVTQALADAGCDAADLQAAYFATAGQGSIE 60 Query: 61 GQYMVSGQIALRAMGITGIPVTNVENACASSSTALNAAHMFVSSGAGDICLAVGVDKLFS 120 GQYMV+GQ+AL+AMGI GIPVTNVENACASSSTALNAAH++V+SGAGDICLAVGVDKLFS Sbjct: 61 GQYMVAGQVALKAMGIAGIPVTNVENACASSSTALNAAHLYVASGAGDICLAVGVDKLFS 120 Query: 121 TDKEKSFAVFDGAWDVHTAAEQMK----XDPDILPPPDYVEPGKRSVFMDIYASLARLHM 176 DK KSFAVFDGAWDVH A QM PD+ PPP + EPGKRSVFMDIYASLARLHM Sbjct: 121 EDKAKSFAVFDGAWDVHDAPAQMARLMALAPDVTPPPGFEEPGKRSVFMDIYASLARLHM 180 Query: 177 KAFGTTQRQIAAVAAKNHTHSTRNPQAQFQYPLTIEEVLAARAVSWPLTLPMCAPISDGA 236 K FGTTQRQ+AAVAAKNH HSTRNP AQFQYP+TI+E LAAR VSWPLTLPMCAPISDGA Sbjct: 181 KTFGTTQRQLAAVAAKNHMHSTRNPLAQFQYPMTIDEALAARPVSWPLTLPMCAPISDGA 240 Query: 237 AAAIVCNEAGLRKLQANRAIRIHATVLRSATERPAGAFDRHLCHLAANQAYEIAGVGPQD 296 AAAIVCN GL++LQ RA+R++A+VLR+AT+RPA +D+HLCHLAA +AYE AGVGPQD Sbjct: 241 AAAIVCNAQGLKRLQRARAVRLYASVLRTATDRPADRYDQHLCHLAALEAYERAGVGPQD 300 Query: 297 MSLAEVHDATAFAEITQTEALGFCAFGEGGPMAESGATTLGGKIPINVSGGLLSRGHPIG 356 MSLAEVHDATAFAEI QTEALGFCAFGEGGPMAESGAT+LGG++PINVSGGLLSRGHPIG Sbjct: 301 MSLAEVHDATAFAEIQQTEALGFCAFGEGGPMAESGATSLGGRVPINVSGGLLSRGHPIG 360 Query: 357 ATGLAQVYEMVTQLRGEAGSRQVDKARFAIAEN 389 ATGLAQV+EMV QLRGEAG+RQV+ ARFAIAEN Sbjct: 361 ATGLAQVHEMVIQLRGEAGARQVEGARFAIAEN 393 >ref|YP_001629723.1| putative thiolase [Bordetella petrii DSM 12804] emb|CAP41453.1| putative thiolase [Bordetella petrii] Length = 412 Score = 451 bits (1160), Expect = e-125, Method: Compositional matrix adjust. Identities = 217/391 (55%), Positives = 288/391 (73%), Gaps = 6/391 (1%) Query: 5 KTYIVGVGITAFAKQLDTSVKELVRQAVSAALKDAGCESDVLQGAYFATAGQGAIEGQYM 64 + Y+VGVG+T F + LD S+K L RQAV AAL DAG + L+ A+FA A QG +EGQ+M Sbjct: 3 QIYVVGVGMTPFGRHLDVSMKALTRQAVEAALADAGLGKEALEAAFFANASQGHMEGQHM 62 Query: 65 VSGQIALRAMGITGIPVTNVENACASSSTALNAAHMFVSSGAGDICLAVGVDKLFSTDKE 124 + GQ+ALRAMG+ GIPV NVENACAS S+A A + +GA D+ LAVG +K++S D++ Sbjct: 63 IRGQVALRAMGLGGIPVVNVENACASGSSAFTLAVNHLRAGAADVALAVGTEKMYSADRD 122 Query: 125 KSFAVFDGAWDVHTAAE----QMKXDPDILPPPDYVEPGKRSVFMDIYASLARLHMKAFG 180 + F+VFD AWDVH A + ++ + P V SVFMD+YA+ +R HMK FG Sbjct: 123 RMFSVFDSAWDVHEAEQIRERLLQLGAGVAVPEGSVSSKPYSVFMDVYAAFSRAHMKRFG 182 Query: 181 TTQRQIAAVAAKNHTHSTRNPQAQFQYPLTIEEVLAARAVSWPLTLPMCAPISDGAAAAI 240 TTQRQ+AAV+AKNH HS NP +Q++ T +EVLAA +++PLTLPMC+PISDG+AAA+ Sbjct: 183 TTQRQLAAVSAKNHAHSVHNPLSQYRNSYTTDEVLAAPPITYPLTLPMCSPISDGSAAAV 242 Query: 241 VCNEAGLRK--LQANRAIRIHATVLRSATERPAGAFDRHLCHLAANQAYEIAGVGPQDMS 298 VC AGL++ + +RAIR+ A+++ + ++R + H LAA +AYE+AGVGP+D+S Sbjct: 243 VCTAAGLKRWNIDPSRAIRVLASIVHTGSDREDAEYRNHCTALAARRAYELAGVGPRDIS 302 Query: 299 LAEVHDATAFAEITQTEALGFCAFGEGGPMAESGATTLGGKIPINVSGGLLSRGHPIGAT 358 +AEVHDATA EI Q E LGFC FGEGGP +E G T++GG+IP+N SGGL S+GHP+GAT Sbjct: 303 VAEVHDATAMGEIIQIENLGFCEFGEGGPFSERGETSIGGRIPVNPSGGLESKGHPVGAT 362 Query: 359 GLAQVYEMVTQLRGEAGSRQVDKARFAIAEN 389 G+AQV+E+VTQLR EAG RQV AR A+AEN Sbjct: 363 GIAQVHELVTQLRNEAGVRQVAGARLALAEN 393 >ref|YP_525423.1| thiolase [Rhodoferax ferrireducens T118] gb|ABD71892.1| Thiolase [Rhodoferax ferrireducens T118] Length = 413 Score = 448 bits (1153), Expect = e-124, Method: Compositional matrix adjust. Identities = 230/414 (55%), Positives = 294/414 (71%), Gaps = 15/414 (3%) Query: 1 MSHSKTYIVGVGITAFAKQLDTSVKELVRQAVSAALKDAGCESDVLQGAYFATAGQGAIE 60 MS+S Y+ G+G+T F + L SVK+L R AV AAL DAGC+ LQGAYFA + QG ++ Sbjct: 1 MSNS-IYVAGIGMTQFGRHLSLSVKDLTRLAVEAALADAGCDKSQLQGAYFANSTQGHMD 59 Query: 61 GQYMVSGQIALRAMGITGIPVTNVENACASSSTALNAAHMFVSSGAGDICLAVGVDKLFS 120 GQ+M+ GQ+ALRAMG+ +PV NVENACAS+STA A + V +G DI LAVG +K+FS Sbjct: 60 GQHMIRGQLALRAMGLQSLPVVNVENACASASTAFQMAVIHVRAGDADIVLAVGAEKMFS 119 Query: 121 TDKEKSFAVFDGAWDVHTAA----EQMKXDPDILPPPDYVEPGKRSVFMDIYASLARLHM 176 DK + FA FDGAWDVH ++ + PPP V SVFMDIYA++ R+HM Sbjct: 120 ADKARMFAAFDGAWDVHDKEAGRERLLQMGAGVEPPPGSVSSSPYSVFMDIYAAMGRMHM 179 Query: 177 KAFGTTQRQIAAVAAKNHTHSTRNPQAQFQYPLTIEEVLAARAVSWPLTLPMCAPISDGA 236 + +GTT RQ AAV+AKNH HS N +Q++ TIE++L A +++PLTLPMC+P+SDGA Sbjct: 180 REYGTTLRQFAAVSAKNHGHSVHNVNSQYRNAYTIEQILTAAPITYPLTLPMCSPVSDGA 239 Query: 237 AAAIVCNEAGLRKLQA--NRAIRIHATVLRSATERPAGAFDRHLCHLAANQAYEIAGVGP 294 AAAIVCNEAGL+KLQ RAIR+ A VL++ ++R A + HL +A+ + YE AG+GP Sbjct: 240 AAAIVCNEAGLKKLQGRRERAIRVLAYVLQTGSDRSATDLEHHLVRIASRRVYEQAGIGP 299 Query: 295 QDMSLAEVHDATAFAEITQTEALGFCAFGEGGPMAESGATTLGGKIPINVSGGLLSRGHP 354 D+S+AEVHDATA EI Q+E LG G+GGP AE G TT+GG+IPIN SGGL S+GHP Sbjct: 300 NDVSVAEVHDATAIGEILQSELLGLVPMGQGGPAAERGETTIGGRIPINPSGGLESKGHP 359 Query: 355 IGATGLAQVYEMVTQLRGEAGSRQVDKARFAIAEN--------XRVRCTSRCGH 400 IGATG+ Q++E+VTQLRGEAG+RQVD AR AIAEN V C + GH Sbjct: 360 IGATGIGQIFELVTQLRGEAGARQVDGARIAIAENGGGLAGEEEAVACVTLLGH 413 >ref|ZP_01000051.1| Thiolase [Oceanicola batsensis HTCC2597] gb|EAQ02522.1| Thiolase [Oceanicola batsensis HTCC2597] Length = 412 Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust. Identities = 214/389 (55%), Positives = 277/389 (71%), Gaps = 6/389 (1%) Query: 7 YIVGVGITAFAKQLDTSVKELVRQAVSAALKDAGCESDVLQGAYFATAGQGAIEGQYMVS 66 Y+VG+G+T F K D ++K + +AV AAL DAG D + GA+F+ A QG +EGQ+M+ Sbjct: 5 YVVGIGMTPFGKFRDKTIKAMTGEAVVAALSDAGVTVDRIDGAFFSNAVQGHMEGQHMIR 64 Query: 67 GQIALRAMGITGIPVTNVENACASSSTALNAAHMFVSSGAGDICLAVGVDKLFSTDKEKS 126 G+IALR MG+ GIPV NVENACAS+ST A F+ +G GD CLAVG +K++S D+ Sbjct: 65 GEIALREMGLQGIPVVNVENACASASTGFKLAVDFLKAGNGDCCLAVGAEKMYSDDRALM 124 Query: 127 FAVFDGAWDVHTAAEQMKXDPD----ILPPPDYVEPGKRSVFMDIYASLARLHMKAFGTT 182 F+ FD WDV E + D + P + P SVFMD+YA ARLHM FGTT Sbjct: 125 FSAFDSGWDVSNGDEVAQRLADLGAGVEEPEGFKSPKPYSVFMDVYAGFARLHMNTFGTT 184 Query: 183 QRQIAAVAAKNHTHSTRNPQAQFQYPLTIEEVLAARAVSWPLTLPMCAPISDGAAAAIVC 242 Q Q AAVAAKNH HS NP AQ++ +++++VLAA +++PLTLPMCAPISDGAAAA++C Sbjct: 185 QEQFAAVAAKNHAHSAHNPLAQYRDVMSVDQVLAAPPITYPLTLPMCAPISDGAAAAVLC 244 Query: 243 NEAGLRKLQAN--RAIRIHATVLRSATERPAGAFDRHLCHLAANQAYEIAGVGPQDMSLA 300 GL++L + RAI++ A +LRS T+RP + HL LAA QAY AG+GP+DMS+A Sbjct: 245 TGEGLKRLGLDPARAIKVKAAILRSGTDRPPEDYKNHLTRLAALQAYNQAGLGPEDMSVA 304 Query: 301 EVHDATAFAEITQTEALGFCAFGEGGPMAESGATTLGGKIPINVSGGLLSRGHPIGATGL 360 EVHDATA E+ Q E LGF FGEGGP + G T +GG+IP+N SGGL S+GHP+GATG+ Sbjct: 305 EVHDATAVGEVIQIENLGFVEFGEGGPASLRGDTKIGGRIPVNPSGGLESKGHPVGATGI 364 Query: 361 AQVYEMVTQLRGEAGSRQVDKARFAIAEN 389 QV+E+VTQLRGEAG+RQV+ A+ AIAEN Sbjct: 365 GQVFELVTQLRGEAGARQVEGAQNAIAEN 393 >ref|YP_002232760.1| putative thiolase [Burkholderia cenocepacia J2315] emb|CAR53983.1| putative thiolase [Burkholderia cenocepacia J2315] Length = 413 Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust. Identities = 216/392 (55%), Positives = 273/392 (69%), Gaps = 6/392 (1%) Query: 4 SKTYIVGVGITAFAKQLDTSVKELVRQAVSAALKDAGCESDVLQGAYFATAGQGAIEGQY 63 S YI G+ +T F + LD S+ +L R+A+ AL+DAGC +D ++ A++A GA++GQ Sbjct: 2 SNIYIAGIAMTVFGRHLDRSLDDLAREALQRALRDAGCHADAIRAAFYAGITNGALQGQL 61 Query: 64 MVSGQIALRAMGITGIPVTNVENACASSSTALNAAHMFVSSGAGDICLAVGVDKLFSTDK 123 + GQ+ +G+ GIPV NVENACAS STA++ A + SGA D+ LA+G +K+ DK Sbjct: 62 SIPGQVVFSKIGLEGIPVFNVENACASGSTAVHLAVRQLQSGACDVALALGAEKMNVADK 121 Query: 124 EKSFAVFDGAWDVHTAAEQM----KXDPDILPPPDYVEPGKRSVFMDIYASLARLHMKAF 179 KSFA+FD WDV E + I PPP S FM IYA+L R HM + Sbjct: 122 AKSFALFDAGWDVSRVDENFAMLARLGEGIEPPPGSESDRPYSRFMKIYAALCRHHMHTY 181 Query: 180 GTTQRQIAAVAAKNHTHSTRNPQAQFQYPLTIEEVLAARAVSWPLTLPMCAPISDGAAAA 239 GTTQRQIAAV+AKNH HS NP +QF+ P TI+EVLAA +++P+TLPMCAP+SDGAAAA Sbjct: 182 GTTQRQIAAVSAKNHGHSVHNPYSQFRQPFTIDEVLAAAPITYPITLPMCAPLSDGAAAA 241 Query: 240 IVCNEAGLRKLQANRA--IRIHATVLRSATERPAGAFDRHLCHLAANQAYEIAGVGPQDM 297 I+C E GL ++ A+R IRI A+V+RS T R +H+ LAA QAYE AGVGP+DM Sbjct: 242 ILCTEEGLERIGADRGRCIRIAASVIRSFTRRRIDEPHKHIGRLAALQAYEQAGVGPEDM 301 Query: 298 SLAEVHDATAFAEITQTEALGFCAFGEGGPMAESGATTLGGKIPINVSGGLLSRGHPIGA 357 +AEVHDA+A EI Q E LGF GEGGP AE G TLGG+IPIN SGGL S+GHP+GA Sbjct: 302 DVAEVHDASAMGEIIQAENLGFVPLGEGGPAAERGEFTLGGRIPINTSGGLESKGHPLGA 361 Query: 358 TGLAQVYEMVTQLRGEAGSRQVDKARFAIAEN 389 TG+ Q+YE+VTQLRGEAG+RQVD AR AI EN Sbjct: 362 TGIGQLYELVTQLRGEAGARQVDGARHAIQEN 393