BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0255.p (379 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_01226670.1| conserved hypothetical protein [Aurantimonas ... 459 e-127 ref|ZP_08869222.1| hypothetical protein AZA_88897 [Azospirillum ... 454 e-125 ref|YP_001204000.1| hypothetical protein BRADO1895 [Bradyrhizobi... 418 e-115 ref|NP_769059.1| hypothetical protein blr2419 [Bradyrhizobium ja... 414 e-114 ref|YP_001238295.1| hypothetical protein BBta_2209 [Bradyrhizobi... 412 e-113 >ref|ZP_01226670.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] gb|EAS50544.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] Length = 385 Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust. Identities = 231/366 (63%), Positives = 272/366 (74%), Gaps = 6/366 (1%) Query: 5 RIXVPAPFGDGATAVQLAAEHLGYVQIDTINVIERSHHHILYTRIPGYKLSDLERAQSVD 64 R+ V APFGDG A + A EHLGYVQIDTINVIER HHHIL++RIPGY+ +DL RAQSVD Sbjct: 25 RLDVAAPFGDGPDATRAAVEHLGYVQIDTINVIERCHHHILWSRIPGYRRADLHRAQSVD 84 Query: 65 KSVFEYWTHALAYVPTVEFRHFLPEMERRRLNPHASFAGVDKADYAALLKRIRKEGGLSI 124 KSVFEYWTHAL+YVPT + R FLPEM+R R P F V AD +L IRKEG LSI Sbjct: 85 KSVFEYWTHALSYVPTRDIRFFLPEMKRHREAPSRWFERVSPADLKKVLTLIRKEGPLSI 144 Query: 125 RDIDDDVLEEKTHPWGSRKPSKRALRWGFFIGDLVISKRTGMLKTYDLAARHFDWPRRPA 184 RDI+DDVL EK H W SRKPSKRAL+ F+ G L +S+RTGMLKTY+L RHF W RRP Sbjct: 145 RDIEDDVLVEKDHAWASRKPSKRALQMAFYTGALTVSERTGMLKTYELTDRHFGWERRPR 204 Query: 185 PVKEKQFAQYLLRRALKAQGMVSLDSICYGSVQAKPMVKELIAAAVKRKQLVAVHIEGAP 244 P E+Q A Y+L RAL+AQG+VSLDS+C+ S KP ++ELIAA V+ ++LV V +E A Sbjct: 205 PASERQVAAYMLDRALRAQGLVSLDSVCHLSAGRKPAIRELIAARVRSRRLVPVAVEDAG 264 Query: 245 KQPHWIAPALLDALSDGIINPASSERVHILSPFDPLVIQRKRLALFFDYEHRFEAYVPAD 304 K HW P L I A++ VH+LSPFDPL+IQR+RLALFFDYEHRFEAYVP + Sbjct: 265 KVGHWAEPETL-----ATIPEATAPVVHVLSPFDPLIIQRRRLALFFDYEHRFEAYVPKE 319 Query: 305 KRVLGYFALPVLMGDRIVAALDLKMDRKNGKLLVQQWTWM-EKKSTALKSAIEQELHRFE 363 KRVLGYFALPVL+GDRIVAA+DLK DR G+LL QQW+W+ E + + IE LHRFE Sbjct: 320 KRVLGYFALPVLVGDRIVAAIDLKTDRAEGRLLTQQWSWVGEGEPSRHTQPIEDALHRFE 379 Query: 364 QFQKQS 369 FQ Q Sbjct: 380 AFQLQG 385 >ref|ZP_08869222.1| hypothetical protein AZA_88897 [Azospirillum amazonense Y2] gb|EGY01177.1| hypothetical protein AZA_88897 [Azospirillum amazonense Y2] Length = 394 Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust. Identities = 228/366 (62%), Positives = 271/366 (74%), Gaps = 4/366 (1%) Query: 1 MACGRIXVPAPFGDGATAVQLAAEHLGYVQIDTINVIERSHHHILYTRIPGYKLSDLERA 60 +A R+ PAPFG G AV A +HLGYVQIDTINVIERSHHHIL TRIP Y +DL A Sbjct: 25 LAAQRLLEPAPFGAGPEAVAQATQHLGYVQIDTINVIERSHHHILQTRIPDYDRADLAAA 84 Query: 61 QSVDKSVFEYWTHALAYVPTVEFRHFLPEMERRRLNPHASFAGVDKADYAALLKRIRKEG 120 QSVDKSVFEYW HALAY+PT ++R+F P+M + R NP A++A +++ DY ALL+RI +EG Sbjct: 85 QSVDKSVFEYWAHALAYIPTADYRYFAPDMRQMRDNPPANYAAINRRDYNALLRRIGEEG 144 Query: 121 GLSIRDIDDDVLEEKTHPWGSRKPSKRALRWGFFIGDLVISKRTGMLKTYDLAARHFDWP 180 LSIRDIDD+VL EK H W SRKPSKR L +GF+ GDL IS+R GMLK Y+L RHF W Sbjct: 145 ALSIRDIDDEVLVEKEHLWASRKPSKRLLNFGFYNGDLTISRRDGMLKAYELTDRHFGWE 204 Query: 181 RRPAPVKEKQFAQYLLRRALKAQGMVSLDSICYGSVQAKPMVKELIAAAVKRKQLVAVHI 240 RRP P Q A YLL RAL++QG+VSLDSICYG++ K V LI AV+ ++L V I Sbjct: 205 RRPRPATPGQVADYLLNRALRSQGIVSLDSICYGNLGLKAQVLPLIEKAVRARRLAQVTI 264 Query: 241 EGAPKQPHWIAPALLDALSDGIINPASSERVHILSPFDPLVIQRKRLALFFDYEHRFEAY 300 GA K PHW A L++ + P + VHILSPFDPLVIQR+RL F Y HRFEAY Sbjct: 265 TGAEKVPHWAEAAALES----PLPPVPAGLVHILSPFDPLVIQRRRLEAIFGYIHRFEAY 320 Query: 301 VPADKRVLGYFALPVLMGDRIVAALDLKMDRKNGKLLVQQWTWMEKKSTALKSAIEQELH 360 VPA KRVLGYFALPVL+GD IVAALDLK DRK G+LLVQ+WTWM + LK+AIE+ L Sbjct: 321 VPAAKRVLGYFALPVLVGDEIVAALDLKTDRKAGRLLVQRWTWMVPERPDLKAAIEEALG 380 Query: 361 RFEQFQ 366 RF++FQ Sbjct: 381 RFQRFQ 386 >ref|YP_001204000.1| hypothetical protein BRADO1895 [Bradyrhizobium sp. ORS 278] emb|CAL75763.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 403 Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust. Identities = 211/369 (57%), Positives = 261/369 (70%), Gaps = 12/369 (3%) Query: 5 RIXVPAPFGDGATAVQLAAEHLGYVQIDTINVIERSHHHILYTRIPGYKLSDLERAQSVD 64 R+ APFG G+ AV A HLGYVQIDTINVIER HHHIL++RIP Y+ +DL +AQS D Sbjct: 37 RLDGEAPFGAGSEAVTAAVAHLGYVQIDTINVIERCHHHILFSRIPAYRRADLRQAQSAD 96 Query: 65 KSVFEYWTHALAYVPTVEFRHFLPEMERRRLNPHASFAGVDKADYAALLKRIRKEGGLSI 124 K+VFEYWTHAL+YVP +FR+F+P M R R H V D +++ IR+ G L+I Sbjct: 97 KTVFEYWTHALSYVPVQDFRYFVPAMRRYRRVGHRWLTTVKPEDTRKVMRLIRQGGALTI 156 Query: 125 RDIDDDVLEEKTHPWGSRKPSKRALRWGFFIGDLVISKRTGMLKTYDLAARHFDWPRRPA 184 RDIDDD L EK H W SRKPSKRAL+ GF+ G L ++ R GMLKTYDL RHF W R P Sbjct: 157 RDIDDDELREKDHAWASRKPSKRALQLGFYEGVLTVAGRDGMLKTYDLTTRHFGWDRLPK 216 Query: 185 PVKEKQFAQYLLRRALKAQGMVSLDSICYGSVQAKPMVKELIAAAVKRKQLVAVHIEGAP 244 E++ A YLL R L+AQG+VSLDS+C+ + K V+++I A V+R +L V +EGA Sbjct: 217 GATEREIAAYLLDRGLRAQGVVSLDSLCHLNAPRKADVRKVIEARVRRGELRPVALEGAA 276 Query: 245 KQPHWIAPALLDALSDGIINPASSERVHILSPFDPLVIQRKRLALFFDYEHRFEAYVPAD 304 KQ HW PA LD + I+P ERVHILSPFDPL+IQRKR F Y+HRFEAYVP D Sbjct: 277 KQEHWATPAALDERIE--ISP---ERVHILSPFDPLIIQRKRTQAIFGYDHRFEAYVPKD 331 Query: 305 KRVLGYFALPVLMGDRIVAALDLKMDRKNGKLLVQQWTWM-------EKKSTALKSAIEQ 357 KR+ GYFALPVL+G+ IVAA+DLK DR+NGKLL+Q+W+W+ + ALK IE Sbjct: 332 KRLFGYFALPVLVGEEIVAAIDLKTDRQNGKLLMQKWSWVGPGKAARGDQRKALKRIIED 391 Query: 358 ELHRFEQFQ 366 ELHRF++FQ Sbjct: 392 ELHRFQRFQ 400 >ref|NP_769059.1| hypothetical protein blr2419 [Bradyrhizobium japonicum USDA 110] dbj|BAC47684.1| blr2419 [Bradyrhizobium japonicum USDA 110] Length = 388 Score = 414 bits (1065), Expect = e-114, Method: Compositional matrix adjust. Identities = 215/367 (58%), Positives = 262/367 (71%), Gaps = 10/367 (2%) Query: 5 RIXVPAPFGDGATAVQLAAEHLGYVQIDTINVIERSHHHILYTRIPGYKLSDLERAQSVD 64 R+ PFG+GA AV A HLGYVQIDTINVIER HHHIL++RIP Y+ +DL +AQSVD Sbjct: 24 RLDERTPFGEGAQAVADATAHLGYVQIDTINVIERCHHHILFSRIPSYRRADLRQAQSVD 83 Query: 65 KSVFEYWTHALAYVPTVEFRHFLPEMERRRLNPHASFAGVDKADYAALLKRIRKEGGLSI 124 +SVFEYWTHAL+Y+P+ +FR FLP M R H FA V AD +++ +R L+I Sbjct: 84 RSVFEYWTHALSYIPSNDFRFFLPAMREHRREGHKWFASVKPADTRKVMRLVRA-APLTI 142 Query: 125 RDIDDDVLEEKTHPWGSRKPSKRALRWGFFIGDLVISKRTGMLKTYDLAARHFDWPRRPA 184 RDI+DDVL EK H W SRKPSKRAL+ F+ G + IS+R GMLKTY+L RHF W + P Sbjct: 143 RDIEDDVLTEKEHLWQSRKPSKRALQLAFYTGAVTISERQGMLKTYELMTRHFGWDKLPK 202 Query: 185 PVKEKQFAQYLLRRALKAQGMVSLDSICYGSVQAKPMVKELIAAAVKRKQLVAVHIEGAP 244 P K YLL RAL++QG+VSLDS+C+ +K V LIAA V+R +LV V I+GA Sbjct: 203 PASAKDITAYLLDRALRSQGVVSLDSVCHLDAPSKKAVARLIAARVRRGELVPVAIDGAG 262 Query: 245 KQPHWIAPALLDALSDGIINPASSERVHILSPFDPLVIQRKRLALFFDYEHRFEAYVPAD 304 KQ HW APA+L+A +G S + VHILSPFDPL+IQRKR +L F Y H FEAYVP Sbjct: 263 KQEHWGAPAVLEAGGEG----PSPDLVHILSPFDPLIIQRKRTSLIFGYNHLFEAYVPKA 318 Query: 305 KRVLGYFALPVLMGDRIVAALDLKMDRKNGKLLVQQWTWM-EKKSTA----LKSAIEQEL 359 KR LGYFALPVL+GD IVAALDLK DR+ KLL+Q+WTW+ E + TA LK IE+EL Sbjct: 319 KRKLGYFALPVLVGDEIVAALDLKTDRQAKKLLMQKWTWVGEGRKTAGRKELKRVIEEEL 378 Query: 360 HRFEQFQ 366 RFE+FQ Sbjct: 379 DRFERFQ 385 >ref|YP_001238295.1| hypothetical protein BBta_2209 [Bradyrhizobium sp. BTAi1] gb|ABQ34389.1| hypothetical protein BBta_2209 [Bradyrhizobium sp. BTAi1] Length = 404 Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust. Identities = 210/369 (56%), Positives = 260/369 (70%), Gaps = 12/369 (3%) Query: 5 RIXVPAPFGDGATAVQLAAEHLGYVQIDTINVIERSHHHILYTRIPGYKLSDLERAQSVD 64 R+ APFG G AV A HLGYVQIDTINVIER HHHIL++RIP Y+ +DL +AQS D Sbjct: 38 RLDAEAPFGAGPAAVAAAVAHLGYVQIDTINVIERCHHHILFSRIPAYRRADLRQAQSAD 97 Query: 65 KSVFEYWTHALAYVPTVEFRHFLPEMERRRLNPHASFAGVDKADYAALLKRIRKEGGLSI 124 K+VFEYWTHAL+YVP +FR+F+P M R R H F V D +++ +R+ G L+I Sbjct: 98 KTVFEYWTHALSYVPVQDFRYFVPAMRRYRREGHGWFKTVKPEDTRKVMRLVRQGGALTI 157 Query: 125 RDIDDDVLEEKTHPWGSRKPSKRALRWGFFIGDLVISKRTGMLKTYDLAARHFDWPRRPA 184 RDIDDDVL EK H W SRKPSKRAL+ GF+ G L +S R GMLKTYDL RHF W R P Sbjct: 158 RDIDDDVLREKDHAWASRKPSKRALQLGFYEGVLTVSGRDGMLKTYDLTTRHFGWERLPK 217 Query: 185 PVKEKQFAQYLLRRALKAQGMVSLDSICYGSVQAKPMVKELIAAAVKRKQLVAVHIEGAP 244 E++ A YLL R L+AQG+VSLDS+C+ + K V+ +I V+R +LV V +EGA Sbjct: 218 GASEREIATYLLDRGLRAQGVVSLDSLCHLNAARKSDVRRVIDGRVRRGELVPVALEGAG 277 Query: 245 KQPHWIAPALLDALSDGIINPASSERVHILSPFDPLVIQRKRLALFFDYEHRFEAYVPAD 304 +Q HW P L + + I+P ERVHILSPFDPL+IQRKR F Y+HRFEAYVP D Sbjct: 278 RQEHWATPGALAEVIE--ISP---ERVHILSPFDPLIIQRKRTQAIFGYDHRFEAYVPKD 332 Query: 305 KRVLGYFALPVLMGDRIVAALDLKMDRKNGKLLVQQWTWMEKKSTA-------LKSAIEQ 357 +R+ GYFALPVL+G+ IVAALDLK DR+NG+LL+QQW+W+ +A LK IE Sbjct: 333 RRLFGYFALPVLVGEEIVAALDLKTDRQNGRLLMQQWSWVGAGKSARGAGRKDLKRRIED 392 Query: 358 ELHRFEQFQ 366 ELHRF++FQ Sbjct: 393 ELHRFQKFQ 401