BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0246.p (293 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776300.1| assimilatory nitrate reductase large subunit... 504 e-141 ref|YP_004750831.1| Assimilatory nitrate reductase large subunit... 488 e-136 ref|YP_004680927.1| nitrate reductase NasA [Cupriavidus necator ... 475 e-132 ref|YP_728933.1| nitrate reductase [NADH] [Ralstonia eutropha H1... 473 e-131 ref|YP_002007290.1| nitrate reductase; prokaryotic molybdopterin... 471 e-131 >ref|YP_003776300.1| assimilatory nitrate reductase large subunit [Herbaspirillum seropedicae SmR1] gb|ADJ64392.1| assimilatory nitrate reductase large subunit protein [Herbaspirillum seropedicae SmR1] Length = 922 Score = 504 bits (1299), Expect = e-141, Method: Compositional matrix adjust. Identities = 237/293 (80%), Positives = 259/293 (88%) Query: 1 MTRTGKSARLADHVPESFVDMHPQDALRYGVREGSLARISSRWGAMVARVQHSGGIARGS 60 MTRTG+SA LA H+PESF+D+HPQDAL YGVREG LARISSRWGAMVARVQH GGIARGS Sbjct: 621 MTRTGRSATLASHIPESFIDIHPQDALLYGVREGGLARISSRWGAMVARVQHGGGIARGS 680 Query: 61 VFVPIHWSNQTASDARVGALVNPVVDPVSGEPEFKHTPVNIEEFGVSWHGFILSRKALAL 120 VFVPIHW+ Q+ASDARVGA+VNPVVDPVSGEPEFKHTPV IEEF VSWHGFIL+R AL L Sbjct: 681 VFVPIHWNGQSASDARVGAVVNPVVDPVSGEPEFKHTPVAIEEFRVSWHGFILTRHALDL 740 Query: 121 DEITHWTRIQGRDFARYELAGRNAIGDHSAWARKLLGVHDIDADWLEYEDRTAGVYRAVH 180 D++THWTR+QGRDF RYELAGRN I DHSAWAR LLGV D ADWLEYED + G YRAVH Sbjct: 741 DQVTHWTRVQGRDFMRYELAGRNHIPDHSAWARSLLGVQDPQADWLEYEDLSDGSYRAVH 800 Query: 181 VDNDRIDMCIFLSKRPDLPSRAWLASLFDKEQLEEADRVGLLIGQPIEKGADTGPTVCSC 240 V DRIDMC+F+S RPDLPSR+WLA LF KE+LEEADRVGLL+GQPIEKGADTGPTVCSC Sbjct: 801 VVEDRIDMCLFMSARPDLPSRSWLAGLFAKEKLEEADRVGLLVGQPIEKGADTGPTVCSC 860 Query: 241 FGVGRNTICNAVREQGLKTVAEVTACLKAGGNCGSCVPEIRKLMVETMAAETA 293 FGVGRNTICNA+R QGL V +VTACLKAGGNCGSCVPEI+KL+VE + A Sbjct: 861 FGVGRNTICNAIRTQGLSEVGQVTACLKAGGNCGSCVPEIKKLIVEVRLQDAA 913 >ref|YP_004750831.1| Assimilatory nitrate reductase large subunit [Collimonas fungivorans Ter331] gb|AEK60008.1| Assimilatory nitrate reductase large subunit [Collimonas fungivorans Ter331] Length = 915 Score = 488 bits (1255), Expect = e-136, Method: Compositional matrix adjust. Identities = 228/292 (78%), Positives = 256/292 (87%) Query: 1 MTRTGKSARLADHVPESFVDMHPQDALRYGVREGSLARISSRWGAMVARVQHSGGIARGS 60 MTRTGKS +LADHVPESFVDMHPQDAL YGVREG+LAR+SSRWG+MVARVQH GGIARGS Sbjct: 623 MTRTGKSPKLADHVPESFVDMHPQDALLYGVREGALARVSSRWGSMVARVQHGGGIARGS 682 Query: 61 VFVPIHWSNQTASDARVGALVNPVVDPVSGEPEFKHTPVNIEEFGVSWHGFILSRKALAL 120 +FVPIHW+ Q+ASDARVGALVNPVVDPVSGEPEFKHTPV +EEF V+W+GF+LSR L Sbjct: 683 IFVPIHWNGQSASDARVGALVNPVVDPVSGEPEFKHTPVLVEEFRVAWYGFVLSRGRPVL 742 Query: 121 DEITHWTRIQGRDFARYELAGRNAIGDHSAWARKLLGVHDIDADWLEYEDRTAGVYRAVH 180 D++THWTRIQGR F RYELAGR+ I DH AWA LLGV DADWLEY+D +AG+YRAVH Sbjct: 743 DDVTHWTRIQGRRFNRYELAGRSPIADHGAWAADLLGVAIADADWLEYQDASAGIYRAVH 802 Query: 181 VDNDRIDMCIFLSKRPDLPSRAWLASLFDKEQLEEADRVGLLIGQPIEKGADTGPTVCSC 240 V +DRI+ C+FLS RPDLPSRAWLA LF KEQLE+ADR+GLL+GQPI KGADTGPTVCSC Sbjct: 803 VVDDRIEACLFLSPRPDLPSRAWLAGLFVKEQLEDADRIGLLLGQPIAKGADTGPTVCSC 862 Query: 241 FGVGRNTICNAVREQGLKTVAEVTACLKAGGNCGSCVPEIRKLMVETMAAET 292 F VGRNTIC+A R+QGL TVA+VTACLKAGGNCGSCVPEI+KL+ E E Sbjct: 863 FSVGRNTICDAARKQGLTTVAQVTACLKAGGNCGSCVPEIKKLLTEISIVEV 914 >ref|YP_004680927.1| nitrate reductase NasA [Cupriavidus necator N-1] gb|AEI79695.1| nitrate reductase NasA [Cupriavidus necator N-1] Length = 909 Score = 475 bits (1222), Expect = e-132, Method: Compositional matrix adjust. Identities = 219/293 (74%), Positives = 255/293 (87%) Query: 1 MTRTGKSARLADHVPESFVDMHPQDALRYGVREGSLARISSRWGAMVARVQHSGGIARGS 60 MTRTGKSA+LADH+PE FVDMHPQDAL GV EG LAR+S+RWGAMVARV+H GGI RGS Sbjct: 617 MTRTGKSAKLADHLPEPFVDMHPQDALLSGVGEGKLARVSTRWGAMVARVRHGGGIPRGS 676 Query: 61 VFVPIHWSNQTASDARVGALVNPVVDPVSGEPEFKHTPVNIEEFGVSWHGFILSRKALAL 120 VFVPIHW+ Q +SDARVGALVNPVVDPVSGEPEFKHTPV +E FGV+WHGF+LSR AL Sbjct: 677 VFVPIHWNGQFSSDARVGALVNPVVDPVSGEPEFKHTPVRVEPFGVNWHGFVLSRGALPA 736 Query: 121 DEITHWTRIQGRDFARYELAGRNAIGDHSAWARKLLGVHDIDADWLEYEDRTAGVYRAVH 180 + +T+WTR+QGR F RYE AGR+ + D +AWAR LLGV D DADWLEYEDRTAGVY A + Sbjct: 737 EALTYWTRVQGRQFQRYEFAGRDTVADRTAWARALLGVTDPDADWLEYEDRTAGVYHAGY 796 Query: 181 VDNDRIDMCIFLSKRPDLPSRAWLASLFDKEQLEEADRVGLLIGQPIEKGADTGPTVCSC 240 V NDR++ C+++S RP+LPSRAWLA LF +EQLE+ADR+GLL+GQP+EKGADTGPTVCSC Sbjct: 797 VVNDRLEACVYVSTRPELPSRAWLAGLFGREQLEDADRIGLLLGQPMEKGADTGPTVCSC 856 Query: 241 FGVGRNTICNAVREQGLKTVAEVTACLKAGGNCGSCVPEIRKLMVETMAAETA 293 FGVGRNTIC+AVR+ LKT AE+TAC+KAGGNCGSCVPE++KL+VE AE A Sbjct: 857 FGVGRNTICDAVRKHDLKTPAEITACVKAGGNCGSCVPELKKLLVEVRVAEVA 909 >ref|YP_728933.1| nitrate reductase [NADH] [Ralstonia eutropha H16] emb|CAJ95568.1| nitrate reductase [NADH] [Ralstonia eutropha H16] Length = 909 Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust. Identities = 218/293 (74%), Positives = 255/293 (87%) Query: 1 MTRTGKSARLADHVPESFVDMHPQDALRYGVREGSLARISSRWGAMVARVQHSGGIARGS 60 MTRTGKSA+LADH+PE FVDMHPQDAL GV EG LAR+S+RWGAMVARV+H GGI RGS Sbjct: 617 MTRTGKSAKLADHLPEPFVDMHPQDALLSGVGEGKLARVSTRWGAMVARVRHGGGIPRGS 676 Query: 61 VFVPIHWSNQTASDARVGALVNPVVDPVSGEPEFKHTPVNIEEFGVSWHGFILSRKALAL 120 VFVPIHW+ Q +SDARVGALVNPVVDPVSGEPEFKHTPV +E FGV+WHGF+LSR AL Sbjct: 677 VFVPIHWNGQFSSDARVGALVNPVVDPVSGEPEFKHTPVRVEPFGVNWHGFVLSRSALPA 736 Query: 121 DEITHWTRIQGRDFARYELAGRNAIGDHSAWARKLLGVHDIDADWLEYEDRTAGVYRAVH 180 + +T+WTR+QGR F RYE AGR+ + D +AWAR LLGV D DADWLEYEDRTAGVY A + Sbjct: 737 EALTYWTRVQGRQFQRYEFAGRDTVADRTAWARALLGVTDPDADWLEYEDRTAGVYHAGY 796 Query: 181 VDNDRIDMCIFLSKRPDLPSRAWLASLFDKEQLEEADRVGLLIGQPIEKGADTGPTVCSC 240 V NDR++ C+++S RP+LPSRAWLA LF +E+LE+ADR+GLL+GQP+EKGADTGPTVCSC Sbjct: 797 VVNDRLEACVYVSTRPELPSRAWLAGLFGRERLEDADRIGLLLGQPMEKGADTGPTVCSC 856 Query: 241 FGVGRNTICNAVREQGLKTVAEVTACLKAGGNCGSCVPEIRKLMVETMAAETA 293 FGVGRNTIC+AVR+ LKT AE+TAC+KAGGNCGSCVPE++KL+VE AE A Sbjct: 857 FGVGRNTICDAVRKHDLKTPAEITACVKAGGNCGSCVPELKKLLVEVRVAEVA 909 >ref|YP_002007290.1| nitrate reductase; prokaryotic molybdopterin-containing oxidoreductase family; nasa/napa/narb subfamily [Cupriavidus taiwanensis LMG 19424] emb|CAQ71229.1| Nitrate reductase; prokaryotic molybdopterin-containing oxidoreductase family; NasA/napA/narB subfamily [Cupriavidus taiwanensis LMG 19424] Length = 907 Score = 471 bits (1211), Expect = e-131, Method: Compositional matrix adjust. Identities = 217/293 (74%), Positives = 253/293 (86%) Query: 1 MTRTGKSARLADHVPESFVDMHPQDALRYGVREGSLARISSRWGAMVARVQHSGGIARGS 60 MTRTGKSARLADH+PE FVDMHPQDAL GV EG LAR+S+RWGAMVARV+H GGI RGS Sbjct: 615 MTRTGKSARLADHLPEPFVDMHPQDALLCGVGEGKLARVSTRWGAMVARVRHGGGIPRGS 674 Query: 61 VFVPIHWSNQTASDARVGALVNPVVDPVSGEPEFKHTPVNIEEFGVSWHGFILSRKALAL 120 VFVPIHW+ Q +SDARVGALVNPVVDPVSGEPEFKHTPV +E FGV WHGF+LSR+ L Sbjct: 675 VFVPIHWNGQFSSDARVGALVNPVVDPVSGEPEFKHTPVRVEPFGVHWHGFMLSRRPLPA 734 Query: 121 DEITHWTRIQGRDFARYELAGRNAIGDHSAWARKLLGVHDIDADWLEYEDRTAGVYRAVH 180 + +T+WTR+QGR F RYE AGR+ + D +AWAR LLGV D DADWLEYEDR AGVY A H Sbjct: 735 EALTYWTRVQGRQFQRYEFAGRDTVADRTAWARTLLGVTDPDADWLEYEDRAAGVYHAGH 794 Query: 181 VDNDRIDMCIFLSKRPDLPSRAWLASLFDKEQLEEADRVGLLIGQPIEKGADTGPTVCSC 240 V +DR++ C+++S RP+LPSRAWLA LF +E+LE+ADR+GLL+GQP+EKGADTGPTVCSC Sbjct: 795 VVDDRLEACVYVSTRPELPSRAWLAGLFGRERLEDADRIGLLLGQPMEKGADTGPTVCSC 854 Query: 241 FGVGRNTICNAVREQGLKTVAEVTACLKAGGNCGSCVPEIRKLMVETMAAETA 293 FGVGRNTIC+AVR+ LKT AE+TAC+KAGGNCGSCVPE++KL+VE AE A Sbjct: 855 FGVGRNTICDAVRKHDLKTPAEITACVKAGGNCGSCVPELKKLLVEVRVAEAA 907