BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0233.p         (157 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775539.1| stress-induced protein [Herbaspirillum serop...   133   1e-29
ref|YP_004753105.1| protein yicC [Collimonas fungivorans Ter331]...   128   2e-28
ref|YP_001353019.1| hypothetical protein mma_1329 [Janthinobacte...   120   5e-26
ref|ZP_08272967.1| Protein YicC [Oxalobacteraceae bacterium IMCC...   117   7e-25
ref|YP_001100389.1| hypothetical protein HEAR2129 [Herminiimonas...   115   3e-24

>ref|YP_003775539.1| stress-induced protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ63631.1| stress-induced protein [Herbaspirillum seropedicae SmR1]
          Length = 304

 Score =  133 bits (334), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 59/79 (74%), Positives = 71/79 (89%)

Query: 53  LTIYSMTGYAVTKRDTAAGAITVELKSVNSRFLDLQFRVNDDLRAVEPAMREAIISKLVR 112
           +TIYSMTGYAVT R+T+AG +T+E+KSVNSRFLDLQFR+NDDLRAVEP +REAI+ +LVR
Sbjct: 1   MTIYSMTGYAVTTRETSAGTVTLEMKSVNSRFLDLQFRINDDLRAVEPLLREAIMGRLVR 60

Query: 113 GKVECRLSFGRKPPKAPAR 131
           GKVECRLSFGRK   A ++
Sbjct: 61  GKVECRLSFGRKVASANSQ 79


>ref|YP_004753105.1| protein yicC [Collimonas fungivorans Ter331]
 gb|AEK62282.1| Protein yicC [Collimonas fungivorans Ter331]
          Length = 357

 Score =  128 bits (322), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 60/91 (65%), Positives = 74/91 (81%), Gaps = 3/91 (3%)

Query: 44  RGPPHPENR---LTIYSMTGYAVTKRDTAAGAITVELKSVNSRFLDLQFRVNDDLRAVEP 100
           + P +PE +   LTI SMTGYAV  R+TAAG IT+E+KSVNSRFLDLQFR+NDDLR++EP
Sbjct: 44  KNPCNPETKDRILTICSMTGYAVNNRETAAGTITIEIKSVNSRFLDLQFRINDDLRSLEP 103

Query: 101 AMREAIISKLVRGKVECRLSFGRKPPKAPAR 131
           A+REAII ++ RGKVECRLSFGRK     ++
Sbjct: 104 ALREAIIGRVARGKVECRLSFGRKTASGASQ 134


>ref|YP_001353019.1| hypothetical protein mma_1329 [Janthinobacterium sp. Marseille]
 gb|ABR89665.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 305

 Score =  120 bits (302), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 52/72 (72%), Positives = 66/72 (91%)

Query: 53  LTIYSMTGYAVTKRDTAAGAITVELKSVNSRFLDLQFRVNDDLRAVEPAMREAIISKLVR 112
           +TI SMTGYAVT  +T++G +T+E+KSVNSRFLDLQFR+NDDLRA+EP +REAI++++ R
Sbjct: 1   MTICSMTGYAVTTHETSSGTLTIEVKSVNSRFLDLQFRINDDLRALEPVLREAIMARITR 60

Query: 113 GKVECRLSFGRK 124
           GKVECRLSFGRK
Sbjct: 61  GKVECRLSFGRK 72


>ref|ZP_08272967.1| Protein YicC [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF33589.1| Protein YicC [Oxalobacteraceae bacterium IMCC9480]
          Length = 303

 Score =  117 bits (293), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 51/79 (64%), Positives = 64/79 (81%)

Query: 53  LTIYSMTGYAVTKRDTAAGAITVELKSVNSRFLDLQFRVNDDLRAVEPAMREAIISKLVR 112
           + I SMTGYAV  R+T+ G +T+E+KSVNSRFLDLQFR+NDDLRA EP +REAI+ +L R
Sbjct: 1   MAISSMTGYAVVTRETSGGTLTIEVKSVNSRFLDLQFRINDDLRAFEPMLREAIMGRLTR 60

Query: 113 GKVECRLSFGRKPPKAPAR 131
           GKVECR+SFGRK     ++
Sbjct: 61  GKVECRVSFGRKAATGASQ 79


>ref|YP_001100389.1| hypothetical protein HEAR2129 [Herminiimonas arsenicoxydans]
 emb|CAL62266.1| Conserved hypothetical protein, putative stress-induced protein
           [Herminiimonas arsenicoxydans]
          Length = 300

 Score =  115 bits (287), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 62/67 (92%)

Query: 58  MTGYAVTKRDTAAGAITVELKSVNSRFLDLQFRVNDDLRAVEPAMREAIISKLVRGKVEC 117
           MTGYAVT  +T+ G +T+E+KSVNSRFLDLQFR+NDDLRA+EP++REAI++++ RGKVEC
Sbjct: 1   MTGYAVTTHETSNGTLTIEIKSVNSRFLDLQFRINDDLRALEPSLREAIMARVTRGKVEC 60

Query: 118 RLSFGRK 124
           RLSFGRK
Sbjct: 61  RLSFGRK 67