BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0201.p         (66 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004228915.1| hypothetical protein BC1001_2439 [Burkholder...    78   4e-13
ref|ZP_02887034.1| protein of unknown function DUF1656 [Burkhold...    78   4e-13
ref|YP_004360353.1| hypothetical protein bgla_1g17510 [Burkholde...    77   7e-13
ref|YP_004028869.1| hypothetical protein RBRH_02945 [Burkholderi...    76   2e-12
ref|YP_001896401.1| hypothetical protein Bphyt_2783 [Burkholderi...    75   2e-12

>ref|YP_004228915.1| hypothetical protein BC1001_2439 [Burkholderia sp. CCGE1001]
 gb|ADX55855.1| protein of unknown function DUF1656 [Burkholderia sp. CCGE1001]
          Length = 66

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 34/65 (52%), Positives = 47/65 (72%)

Query: 1  MPREISFFDAYVPTLLLAVIVAGAIALVADRILVRIGLYNLVWHPALFRVSLFTCIAALL 60
          MPR+I+ FDAYVPT++L  +   A+  V DR++   G+Y +VWHP+LFR SL  C+  LL
Sbjct: 1  MPRDIAVFDAYVPTIVLLFVAGAALTWVLDRVIAYTGVYRVVWHPSLFRASLLVCVCGLL 60

Query: 61 GLAIY 65
          GLA+Y
Sbjct: 61 GLAVY 65


>ref|ZP_02887034.1| protein of unknown function DUF1656 [Burkholderia graminis C4D1M]
 gb|EDT07380.1| protein of unknown function DUF1656 [Burkholderia graminis C4D1M]
          Length = 66

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 34/65 (52%), Positives = 47/65 (72%)

Query: 1  MPREISFFDAYVPTLLLAVIVAGAIALVADRILVRIGLYNLVWHPALFRVSLFTCIAALL 60
          MPR+I+ FDAYVPT++L  +   AI  V DR++   G+Y +VWHP+LFR SL  C+  +L
Sbjct: 1  MPRDIAVFDAYVPTIVLLFVAGAAITWVLDRVIAYTGVYRVVWHPSLFRASLLVCVCGVL 60

Query: 61 GLAIY 65
          GLA+Y
Sbjct: 61 GLAVY 65


>ref|YP_004360353.1| hypothetical protein bgla_1g17510 [Burkholderia gladioli BSR3]
 gb|AEA60397.1| hypothetical protein bgla_1g17510 [Burkholderia gladioli BSR3]
          Length = 67

 Score = 77.4 bits (189), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 35/65 (53%), Positives = 46/65 (70%)

Query: 1  MPREISFFDAYVPTLLLAVIVAGAIALVADRILVRIGLYNLVWHPALFRVSLFTCIAALL 60
          MPREI+ FDAY+PT++L  ++   +  + DR+L   GLY LVWHP+LFR SL  CI   L
Sbjct: 2  MPREIAVFDAYMPTVVLMFVLGALLTWMVDRLLAATGLYRLVWHPSLFRASLLVCICGGL 61

Query: 61 GLAIY 65
          GLA+Y
Sbjct: 62 GLAVY 66


>ref|YP_004028869.1| hypothetical protein RBRH_02945 [Burkholderia rhizoxinica HKI
          454]
 emb|CBW74725.1| Hypothetical membrane associated protein [Burkholderia
          rhizoxinica HKI 454]
          Length = 66

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/65 (55%), Positives = 43/65 (66%)

Query: 1  MPREISFFDAYVPTLLLAVIVAGAIALVADRILVRIGLYNLVWHPALFRVSLFTCIAALL 60
          MPR+I+ FDAYVP LLL  +   A+    DR+L   G+Y L WHP+L R SL TCI  L 
Sbjct: 1  MPRDIALFDAYVPMLLLTTLAGTALTWALDRVLAYFGVYRLFWHPSLARASLLTCIVCLF 60

Query: 61 GLAIY 65
          GLAIY
Sbjct: 61 GLAIY 65


>ref|YP_001896401.1| hypothetical protein Bphyt_2783 [Burkholderia phytofirmans PsJN]
 gb|ACD17177.1| protein of unknown function DUF1656 [Burkholderia phytofirmans
          PsJN]
          Length = 66

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/65 (50%), Positives = 46/65 (70%)

Query: 1  MPREISFFDAYVPTLLLAVIVAGAIALVADRILVRIGLYNLVWHPALFRVSLFTCIAALL 60
          MPR+I+ FDAYVP ++L  I   A+  V DR++   G+Y +VWHP+LFR SL  C+  +L
Sbjct: 1  MPRDIAVFDAYVPAIVLLFIAGAALTWVLDRVIAYTGVYRVVWHPSLFRASLLVCVCGVL 60

Query: 61 GLAIY 65
          GLA+Y
Sbjct: 61 GLAVY 65