BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0200.p         (173 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775513.1| multidrug resistance efflux pump protein [He...   196   1e-48
ref|YP_001857813.1| secretion protein HlyD family protein [Burkh...   147   7e-34
ref|ZP_06840959.1| secretion protein HlyD family protein [Burkho...   147   8e-34
ref|YP_559662.1| aromatic acid efflux system EmrA subfamily memb...   147   8e-34
ref|YP_004028868.1| fusaric acid resistance protein fusE [Burkho...   145   3e-33

>ref|YP_003775513.1| multidrug resistance efflux pump protein [Herbaspirillum
           seropedicae SmR1]
 gb|ADJ63605.1| multidrug resistance efflux pump protein [Herbaspirillum
           seropedicae SmR1]
          Length = 324

 Score =  196 bits (497), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 95/115 (82%), Positives = 103/115 (89%)

Query: 1   MSVKSIFRFLVTALIFLAAIFLAWSLWQHYMVSPWTRDGRVRAEVVNIAPDVAGQVVDLP 60
           MSVKSIFR L+T  IFL AI LAWSLWQHYM SPWTRDGRVRAEVVNIAPDV+GQVV LP
Sbjct: 1   MSVKSIFRVLITTAIFLLAILLAWSLWQHYMHSPWTRDGRVRAEVVNIAPDVSGQVVALP 60

Query: 61  VRDNQLVHKGDLLMQIDPSRYQLALQQAEAAVAARKADLDMRRAXVAARKADLDM 115
           VRDNQLV KGDLLM+IDP+RY LALQQAEAAV ARKA+LD+RRA V AR+ADL+M
Sbjct: 61  VRDNQLVKKGDLLMEIDPARYTLALQQAEAAVTARKAELDVRRAEVEARRADLNM 115


>ref|YP_001857813.1| secretion protein HlyD family protein [Burkholderia phymatum
           STM815]
 gb|ACC70767.1| secretion protein HlyD family protein [Burkholderia phymatum
           STM815]
          Length = 286

 Score =  147 bits (370), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 76/114 (66%), Positives = 95/114 (83%), Gaps = 1/114 (0%)

Query: 1   MSVKSIFRFLVTALIFLAAIFLAWSLWQHYMVSPWTRDGRVRAEVVNIAPDVAGQVVDLP 60
           M++++I  F+ TA++F+ AI +  +LW HYM  PWTRDGRVRAEVVNIAPDV+G VV LP
Sbjct: 1   MTIRNIIGFIATAIVFVVAILIGRALWVHYMDEPWTRDGRVRAEVVNIAPDVSGAVVALP 60

Query: 61  VRDNQLVHKGDLLMQIDPSRYQLALQQAEAAVAARKADLDMRRAXVAARKADLD 114
           VRDNQ VHKGDLLMQIDPS YQ+A++QA+AAVAARK++L MRR   A R+AD+D
Sbjct: 61  VRDNQFVHKGDLLMQIDPSHYQIAVEQAQAAVAARKSELQMRRDD-AQRRADMD 113


>ref|ZP_06840959.1| secretion protein HlyD family protein [Burkholderia sp. Ch1-1]
 gb|EFG71249.1| secretion protein HlyD family protein [Burkholderia sp. Ch1-1]
          Length = 291

 Score =  147 bits (370), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 76/114 (66%), Positives = 95/114 (83%), Gaps = 1/114 (0%)

Query: 1   MSVKSIFRFLVTALIFLAAIFLAWSLWQHYMVSPWTRDGRVRAEVVNIAPDVAGQVVDLP 60
           M++++I  F+ TA+IF+ AI +   LW HYM  PWTRDGRVRAE++NIAPDV+G +VDLP
Sbjct: 1   MTIRNIVGFVATAVIFIVAILIGRVLWVHYMDEPWTRDGRVRAEIINIAPDVSGAIVDLP 60

Query: 61  VRDNQLVHKGDLLMQIDPSRYQLALQQAEAAVAARKADLDMRRAXVAARKADLD 114
           V+DNQLV KGDLLMQIDPS YQLA++QA+AAVAARKA+L MRR   A R+AD+D
Sbjct: 61  VKDNQLVKKGDLLMQIDPSHYQLAVEQAQAAVAARKAELQMRRDD-AQRRADMD 113


>ref|YP_559662.1| aromatic acid efflux system EmrA subfamily membrane fusion protein
           [Burkholderia xenovorans LB400]
 gb|ABE31610.1| aromatic acid efflux system, membrane fusion protein, EmrA
           subfamily [Burkholderia xenovorans LB400]
          Length = 291

 Score =  147 bits (370), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 76/114 (66%), Positives = 95/114 (83%), Gaps = 1/114 (0%)

Query: 1   MSVKSIFRFLVTALIFLAAIFLAWSLWQHYMVSPWTRDGRVRAEVVNIAPDVAGQVVDLP 60
           M++++I  F+ TA+IF+ AI +   LW HYM  PWTRDGRVRAE++NIAPDV+G +VDLP
Sbjct: 1   MTIRNIVGFVATAVIFIVAILIGRVLWVHYMDEPWTRDGRVRAEIINIAPDVSGAIVDLP 60

Query: 61  VRDNQLVHKGDLLMQIDPSRYQLALQQAEAAVAARKADLDMRRAXVAARKADLD 114
           V+DNQLV KGDLLMQIDPS YQLA++QA+AAVAARKA+L MRR   A R+AD+D
Sbjct: 61  VKDNQLVKKGDLLMQIDPSHYQLAVEQAQAAVAARKAELQMRRDD-AQRRADMD 113


>ref|YP_004028868.1| fusaric acid resistance protein fusE [Burkholderia rhizoxinica HKI
           454]
 emb|CBW74724.1| Fusaric acid resistance protein fusE [Burkholderia rhizoxinica HKI
           454]
          Length = 295

 Score =  145 bits (365), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 64/101 (63%), Positives = 80/101 (79%)

Query: 1   MSVKSIFRFLVTALIFLAAIFLAWSLWQHYMVSPWTRDGRVRAEVVNIAPDVAGQVVDLP 60
           M ++ I  F  T  IF  A+ L  +LW +YM SPWTRDGRVRAE++NIAPDV+GQ+V+ P
Sbjct: 1   MKLRRILSFFATIAIFAVAVLLGRALWVYYMDSPWTRDGRVRAEIINIAPDVSGQIVEFP 60

Query: 61  VRDNQLVHKGDLLMQIDPSRYQLALQQAEAAVAARKADLDM 101
           VRDNQ VH+GD+LM+IDP  Y++A+QQAEA VAARKADL M
Sbjct: 61  VRDNQFVHRGDVLMRIDPGHYRIAVQQAEALVAARKADLQM 101