BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0183.p (424 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBJ37793.1| cytosine deaminase [Ralstonia solanacearum CMR15] 718 0.0 ref|YP_003752329.1| cytosine deaminase [Ralstonia solanacearum P... 710 0.0 emb|CCA86367.1| cytosine deaminase [Ralstonia syzygii R24] 708 0.0 ref|NP_519715.1| cytosine deaminase [Ralstonia solanacearum GMI1... 708 0.0 emb|CCA80013.1| cytosine deaminase [blood disease bacterium R229] 707 0.0 >emb|CBJ37793.1| cytosine deaminase [Ralstonia solanacearum CMR15] Length = 423 Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/423 (83%), Positives = 379/423 (89%) Query: 1 MDLILRNATLPDGGQQADIAIEAGRIVAIGPALNLKGVQEIDIAGDLVTPPFVDAHFHMD 60 MD ++RNA+LPDG DI I AGRI A+ P L +G +E+D AG LV+PPFVDAHFHMD Sbjct: 1 MDFVIRNASLPDGRAGIDIGIAAGRIEAVQPRLPARGAEEVDAAGALVSPPFVDAHFHMD 60 Query: 61 ATLSYGLPRVNASGTLLEGIALWGELKPELTQQALVGRALQYCDWAVARGLLAIRSHVDV 120 ATLSYGLPRVN SGTLLEGIALWGELKP LTQ+ALV RAL+YCDWAVARGLLAIRSHVDV Sbjct: 61 ATLSYGLPRVNQSGTLLEGIALWGELKPALTQEALVERALRYCDWAVARGLLAIRSHVDV 120 Query: 121 CDDRLLAVEALLHVKKLVAPYLDLQLVAFPQDGLLRSPTAFANLQRAIAMGVDVVGGIPH 180 CD RLLAVEALLHVK+ VAPYLDLQLVAFPQDG+LRSP AF NL+RAI MGVDVVGGIPH Sbjct: 121 CDARLLAVEALLHVKRQVAPYLDLQLVAFPQDGVLRSPGAFDNLRRAIGMGVDVVGGIPH 180 Query: 181 FERTMAEGAESVRLLCEFAAENGLRVDMHCDESDDPMSRHIETLAYHAQRLGLQGRVAGS 240 FERTMA+GAESVRLLCEFAAE GLRVDMHCDESDDP+SRH+ETLA A RLGL GRVAGS Sbjct: 181 FERTMADGAESVRLLCEFAAERGLRVDMHCDESDDPLSRHVETLAAQAHRLGLHGRVAGS 240 Query: 241 HLTSMHSMDNYYVSKLLPLIREAGVAAIANPLINITLQGRHDTYPKRRGMTRVPELLAAG 300 HLTSMHSMDNYYVSKLLPL+REAGVAAIANPLINITLQGR DTYPKRRGMTRVPELLAAG Sbjct: 241 HLTSMHSMDNYYVSKLLPLMREAGVAAIANPLINITLQGRSDTYPKRRGMTRVPELLAAG 300 Query: 301 IDVAFGHDCVMDPWYSLGSGDMLEVAHMGLHVAQMTGQEAMRSCFRAVTETPARILGLEG 360 IDVAFGHDCVMDPWY LGSGDMLEVAHMGLHVAQMTGQ AMR CF AVTETPARILGLEG Sbjct: 301 IDVAFGHDCVMDPWYGLGSGDMLEVAHMGLHVAQMTGQAAMRQCFAAVTETPARILGLEG 360 Query: 361 YGLQVGCHADLVVLDAGDPIEAIRLRAARRFVIRRGVVISQAPPAHAQLNLPGRPGKVDF 420 YG+ GCHADLV+LDA DPIEAIRLRAAR V+RRG V+++ P HA L+LPGRP +VDF Sbjct: 361 YGIAPGCHADLVMLDARDPIEAIRLRAARTLVMRRGRVVARTPAPHAALSLPGRPPRVDF 420 Query: 421 RLA 423 RLA Sbjct: 421 RLA 423 >ref|YP_003752329.1| cytosine deaminase [Ralstonia solanacearum PSI07] emb|CBJ51044.1| cytosine deaminase [Ralstonia solanacearum PSI07] Length = 423 Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/423 (83%), Positives = 375/423 (88%) Query: 1 MDLILRNATLPDGGQQADIAIEAGRIVAIGPALNLKGVQEIDIAGDLVTPPFVDAHFHMD 60 MD ++RNA+LPDG DI I AGRI A+ P L +G +EID AG LV+PPFVDAHFHMD Sbjct: 1 MDFVIRNASLPDGRAGIDIGIAAGRIEAVRPRLPARGAEEIDAAGALVSPPFVDAHFHMD 60 Query: 61 ATLSYGLPRVNASGTLLEGIALWGELKPELTQQALVGRALQYCDWAVARGLLAIRSHVDV 120 ATLSYGLPRVN SGTLLEGIALWGELKP LTQ+ALV RAL+YCDWAVARGLLAIRSHVDV Sbjct: 61 ATLSYGLPRVNQSGTLLEGIALWGELKPALTQEALVERALRYCDWAVARGLLAIRSHVDV 120 Query: 121 CDDRLLAVEALLHVKKLVAPYLDLQLVAFPQDGLLRSPTAFANLQRAIAMGVDVVGGIPH 180 CD RLLAVEALLHVK+ VAPYLDLQLVAFPQDG+LRSP AF +L+RAI MGVDVVGGIPH Sbjct: 121 CDPRLLAVEALLHVKRQVAPYLDLQLVAFPQDGVLRSPGAFDSLKRAIGMGVDVVGGIPH 180 Query: 181 FERTMAEGAESVRLLCEFAAENGLRVDMHCDESDDPMSRHIETLAYHAQRLGLQGRVAGS 240 FERTMA+GAESVRLLCEFAAE GLRVDMHCDESDDP+SRHIETLA RLGL GRVAGS Sbjct: 181 FERTMADGAESVRLLCEFAAECGLRVDMHCDESDDPLSRHIETLAAQTHRLGLHGRVAGS 240 Query: 241 HLTSMHSMDNYYVSKLLPLIREAGVAAIANPLINITLQGRHDTYPKRRGMTRVPELLAAG 300 HLTSMHSMDNYYVSKLLPL+REAGVAAIANPLINITLQGR DTYPKRRGMTRVPELLA G Sbjct: 241 HLTSMHSMDNYYVSKLLPLMREAGVAAIANPLINITLQGRSDTYPKRRGMTRVPELLAGG 300 Query: 301 IDVAFGHDCVMDPWYSLGSGDMLEVAHMGLHVAQMTGQEAMRSCFRAVTETPARILGLEG 360 IDVAFGHDCVMDPWY LGSGDMLEVAHMGLHVAQMTGQ AMR CF AVTETPARILGLEG Sbjct: 301 IDVAFGHDCVMDPWYGLGSGDMLEVAHMGLHVAQMTGQAAMRQCFAAVTETPARILGLEG 360 Query: 361 YGLQVGCHADLVVLDAGDPIEAIRLRAARRFVIRRGVVISQAPPAHAQLNLPGRPGKVDF 420 YG+ GCHADLV+LDA DPIEAIRLRAAR V+RRG V+++ HA L+LPGRP VDF Sbjct: 361 YGIAPGCHADLVMLDARDPIEAIRLRAARTLVMRRGKVVARTSAPHAALSLPGRPQHVDF 420 Query: 421 RLA 423 RLA Sbjct: 421 RLA 423 >emb|CCA86367.1| cytosine deaminase [Ralstonia syzygii R24] Length = 423 Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/423 (82%), Positives = 376/423 (88%) Query: 1 MDLILRNATLPDGGQQADIAIEAGRIVAIGPALNLKGVQEIDIAGDLVTPPFVDAHFHMD 60 MD ++RNA+LPDG DI I AGRI A+ P L +G +EID AG LV+PPFVDAHFHMD Sbjct: 1 MDFVIRNASLPDGRAGIDIGIAAGRIEAVQPGLPARGAEEIDAAGALVSPPFVDAHFHMD 60 Query: 61 ATLSYGLPRVNASGTLLEGIALWGELKPELTQQALVGRALQYCDWAVARGLLAIRSHVDV 120 ATLSYGLPRVN SGTLLEGIALWGELKP LTQ+ALV RAL+YCDWAVARGLLAIRSHVDV Sbjct: 61 ATLSYGLPRVNQSGTLLEGIALWGELKPALTQEALVERALRYCDWAVARGLLAIRSHVDV 120 Query: 121 CDDRLLAVEALLHVKKLVAPYLDLQLVAFPQDGLLRSPTAFANLQRAIAMGVDVVGGIPH 180 CD RLLAVEALLHVK+ VAPYLDLQLVAFPQDG+LRSP AF +L+RAI MGV+VVGGIPH Sbjct: 121 CDPRLLAVEALLHVKRQVAPYLDLQLVAFPQDGVLRSPGAFDSLKRAIGMGVEVVGGIPH 180 Query: 181 FERTMAEGAESVRLLCEFAAENGLRVDMHCDESDDPMSRHIETLAYHAQRLGLQGRVAGS 240 FERTMA+GAESVRLLCEFAAE GLRVDMHCDESDDP+SRHIETLA RLGL GRVAGS Sbjct: 181 FERTMADGAESVRLLCEFAAERGLRVDMHCDESDDPLSRHIETLAAQTHRLGLHGRVAGS 240 Query: 241 HLTSMHSMDNYYVSKLLPLIREAGVAAIANPLINITLQGRHDTYPKRRGMTRVPELLAAG 300 HLTSMHSMDNYYVSKLLPL+REAGVAAIANPLINITLQGR DTYPKRRGMTRVPELLAAG Sbjct: 241 HLTSMHSMDNYYVSKLLPLMREAGVAAIANPLINITLQGRSDTYPKRRGMTRVPELLAAG 300 Query: 301 IDVAFGHDCVMDPWYSLGSGDMLEVAHMGLHVAQMTGQEAMRSCFRAVTETPARILGLEG 360 I+VAFGHDCVMDPWY LGSGDMLEVAHMGLHVAQMTGQ AMR CF AVTETPARILGLEG Sbjct: 301 IEVAFGHDCVMDPWYGLGSGDMLEVAHMGLHVAQMTGQAAMRQCFAAVTETPARILGLEG 360 Query: 361 YGLQVGCHADLVVLDAGDPIEAIRLRAARRFVIRRGVVISQAPPAHAQLNLPGRPGKVDF 420 YG+ GCHADLV+LDA DPIEAIRLRAAR V+RRG V+++ +A L+LPGRP VDF Sbjct: 361 YGIAPGCHADLVMLDARDPIEAIRLRAARTLVMRRGKVVARTSAPYAALSLPGRPQHVDF 420 Query: 421 RLA 423 RLA Sbjct: 421 RLA 423 >ref|NP_519715.1| cytosine deaminase [Ralstonia solanacearum GMI1000] emb|CAD15296.1| probable cytosine deaminase (cytosine aminohydrolase) protein [Ralstonia solanacearum GMI1000] Length = 423 Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/423 (82%), Positives = 376/423 (88%) Query: 1 MDLILRNATLPDGGQQADIAIEAGRIVAIGPALNLKGVQEIDIAGDLVTPPFVDAHFHMD 60 MD ++RNA+LPDG DI I AGRI A+ L +G +E+D AG LV+PPFVDAHFHMD Sbjct: 1 MDFVIRNASLPDGRAGIDIGIAAGRIEAVQQRLPARGAEEVDAAGALVSPPFVDAHFHMD 60 Query: 61 ATLSYGLPRVNASGTLLEGIALWGELKPELTQQALVGRALQYCDWAVARGLLAIRSHVDV 120 ATLSYGLPRVN SGTLLEGIALWGELKP LTQ+AL+ RAL+YCDWAVARGLLAIRSHVDV Sbjct: 61 ATLSYGLPRVNRSGTLLEGIALWGELKPALTQEALIERALRYCDWAVARGLLAIRSHVDV 120 Query: 121 CDDRLLAVEALLHVKKLVAPYLDLQLVAFPQDGLLRSPTAFANLQRAIAMGVDVVGGIPH 180 CD RLLAVEALLHVK+ VAPYLDLQLVAFP DG+LRSP AF NL+RAI MGVDVVGGIPH Sbjct: 121 CDARLLAVEALLHVKRQVAPYLDLQLVAFPPDGVLRSPGAFDNLRRAIGMGVDVVGGIPH 180 Query: 181 FERTMAEGAESVRLLCEFAAENGLRVDMHCDESDDPMSRHIETLAYHAQRLGLQGRVAGS 240 FERTMA+GAESVRLLCEFAAE GLRVDMHCDESDDP+SRH+ETLA A RLGL GRVAGS Sbjct: 181 FERTMADGAESVRLLCEFAAERGLRVDMHCDESDDPLSRHVETLAAQAHRLGLHGRVAGS 240 Query: 241 HLTSMHSMDNYYVSKLLPLIREAGVAAIANPLINITLQGRHDTYPKRRGMTRVPELLAAG 300 HLTSMHSMDNYYVSKLLPL+REAGVAAIANPLINITLQGR DTYPKRRGMTRVPELLAAG Sbjct: 241 HLTSMHSMDNYYVSKLLPLMREAGVAAIANPLINITLQGRSDTYPKRRGMTRVPELLAAG 300 Query: 301 IDVAFGHDCVMDPWYSLGSGDMLEVAHMGLHVAQMTGQEAMRSCFRAVTETPARILGLEG 360 IDVAFGHDCVMDPWY LGSGDMLEVAHMGLHVAQMTGQ AMR CF AVTETPARILGLEG Sbjct: 301 IDVAFGHDCVMDPWYGLGSGDMLEVAHMGLHVAQMTGQAAMRQCFAAVTETPARILGLEG 360 Query: 361 YGLQVGCHADLVVLDAGDPIEAIRLRAARRFVIRRGVVISQAPPAHAQLNLPGRPGKVDF 420 YG+ GCHADLV+LDA DPIEAIRLRAAR V+RRG V+++ P HA L+LPGR +VDF Sbjct: 361 YGIAPGCHADLVMLDARDPIEAIRLRAARTLVMRRGRVVARTPAPHAVLSLPGRAPRVDF 420 Query: 421 RLA 423 RLA Sbjct: 421 RLA 423 >emb|CCA80013.1| cytosine deaminase [blood disease bacterium R229] Length = 423 Score = 707 bits (1824), Expect = 0.0, Method: Compositional matrix adjust. Identities = 351/423 (82%), Positives = 374/423 (88%) Query: 1 MDLILRNATLPDGGQQADIAIEAGRIVAIGPALNLKGVQEIDIAGDLVTPPFVDAHFHMD 60 MD ++RNA+LPDG DI I AGRI A+ P L +G +EID AG LV+PPFVDAHFHMD Sbjct: 1 MDFVIRNASLPDGRAGIDIGIAAGRIEAVRPRLPARGAEEIDAAGALVSPPFVDAHFHMD 60 Query: 61 ATLSYGLPRVNASGTLLEGIALWGELKPELTQQALVGRALQYCDWAVARGLLAIRSHVDV 120 ATLSYGLPRVN SGTLLEGIALWGELKP LTQ+ALV RAL+YCDWAVARGLLAIRSHVDV Sbjct: 61 ATLSYGLPRVNQSGTLLEGIALWGELKPALTQEALVERALRYCDWAVARGLLAIRSHVDV 120 Query: 121 CDDRLLAVEALLHVKKLVAPYLDLQLVAFPQDGLLRSPTAFANLQRAIAMGVDVVGGIPH 180 CD RLLAVEALLHVK+ VAPYLDLQLVAFPQDG+LRSP AF +L+RAI MGVDVVGGIPH Sbjct: 121 CDPRLLAVEALLHVKRQVAPYLDLQLVAFPQDGVLRSPGAFDSLKRAIGMGVDVVGGIPH 180 Query: 181 FERTMAEGAESVRLLCEFAAENGLRVDMHCDESDDPMSRHIETLAYHAQRLGLQGRVAGS 240 FERTMA+GAESVRLLCEFAAE GLRVDMHCDESDDP+SRHIETLA RLGL GRVAGS Sbjct: 181 FERTMADGAESVRLLCEFAAECGLRVDMHCDESDDPLSRHIETLAAQTHRLGLHGRVAGS 240 Query: 241 HLTSMHSMDNYYVSKLLPLIREAGVAAIANPLINITLQGRHDTYPKRRGMTRVPELLAAG 300 HLTSMHSMDNYYVSKLLPL+REA VAAIANPLINITLQGR DTYPKRRGMTRVPELLA G Sbjct: 241 HLTSMHSMDNYYVSKLLPLMREARVAAIANPLINITLQGRSDTYPKRRGMTRVPELLAGG 300 Query: 301 IDVAFGHDCVMDPWYSLGSGDMLEVAHMGLHVAQMTGQEAMRSCFRAVTETPARILGLEG 360 IDVAFGHDCVMDPWY LGSGDMLEVAHMGLHVAQMTGQ AMR CF AVTETPARILGLEG Sbjct: 301 IDVAFGHDCVMDPWYGLGSGDMLEVAHMGLHVAQMTGQAAMRQCFAAVTETPARILGLEG 360 Query: 361 YGLQVGCHADLVVLDAGDPIEAIRLRAARRFVIRRGVVISQAPPAHAQLNLPGRPGKVDF 420 YG+ GCHADLV+LDA DPIEAIRLRAAR V+RRG V+++ HA L+LPGRP VDF Sbjct: 361 YGIAPGCHADLVMLDARDPIEAIRLRAARTLVMRRGKVVARTSAPHAALSLPGRPQHVDF 420 Query: 421 RLA 423 RLA Sbjct: 421 RLA 423