BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0180.p (327 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776121.1| Na+-dependent transporter protein [Herbaspir... 525 e-147 ref|YP_004752455.1| putative sodium/bile acid symporter family p... 457 e-126 ref|YP_001348622.1| hypothetical protein PSPA7_3262 [Pseudomonas... 422 e-116 ref|NP_250716.1| hypothetical protein PA2026 [Pseudomonas aerugi... 412 e-113 ref|YP_791213.1| bile acid/Na+ symporter family transporter [Pse... 411 e-113 >ref|YP_003776121.1| Na+-dependent transporter protein [Herbaspirillum seropedicae SmR1] gb|ADJ64213.1| Na+-dependent transporter protein [Herbaspirillum seropedicae SmR1] Length = 335 Score = 525 bits (1353), Expect = e-147, Method: Compositional matrix adjust. Identities = 260/322 (80%), Positives = 292/322 (90%), Gaps = 1/322 (0%) Query: 1 MARPRFLPDNLTLMLFAVVLTASLFPCTGVVAVGFDWLTTFMIGLLFFMHGAKLSREAVI 60 MARPRFLPDN+TL+L AVV+TASL PCTG VA FD LTTFMIGLLFFMHGAKLSREAV+ Sbjct: 1 MARPRFLPDNMTLLLLAVVVTASLLPCTGQVAEVFDGLTTFMIGLLFFMHGAKLSREAVV 60 Query: 61 AGMVHWRLHVTVLLCTFAVFPVLGLILKPALLLVITPDLYLGILFLCVLPSTVQSSIAFT 120 AG HW+LHVTVLLCTFA+FP++GL KP L ITP+LYLG+LFLCVLPSTVQSSIAFT Sbjct: 61 AGFTHWKLHVTVLLCTFALFPLVGLAFKPLLTPFITPELYLGLLFLCVLPSTVQSSIAFT 120 Query: 121 SVARGNVPAAICAASASNLLGIFLTPLMVGVIIVAHN-AEHSSLGSILKIVYQLLLPFVA 179 SVARGNVPAAICAASASNLLGIFLTPL+VG ++VAH A HSSL SILKIVYQLLLPFVA Sbjct: 121 SVARGNVPAAICAASASNLLGIFLTPLLVGALVVAHEGAGHSSLDSILKIVYQLLLPFVA 180 Query: 180 GQIARPWIGAWMDRNKSWLRWVDQSSVLLVVYVAFSEAVNQGLWRQVPPVMLVSLIVISC 239 GQIARPWIG W++RNKSWL++VDQSS+LLVVYVAFSEAV QGLW QVP MLV+L+VI+ Sbjct: 181 GQIARPWIGRWIERNKSWLKFVDQSSILLVVYVAFSEAVVQGLWHQVPMSMLVALLVINA 240 Query: 240 LLLAIIMSITTFGSRRLGFNKEDEITIVFCGSKKSLASGVPMAKVLFASQTVGMVLLPLM 299 +LLA+IM++TT+GSRRLGF+KEDEITIVFCGSKKSLASGVPMAKVLF+S +GMVLLP+M Sbjct: 241 VLLALIMALTTYGSRRLGFSKEDEITIVFCGSKKSLASGVPMAKVLFSSGAIGMVLLPVM 300 Query: 300 LFHQIQLMVCAILAQRYGNRPE 321 LFHQ+QLMVCA+LA RYG R E Sbjct: 301 LFHQLQLMVCAVLAARYGARQE 322 >ref|YP_004752455.1| putative sodium/bile acid symporter family protein [Collimonas fungivorans Ter331] gb|AEK61632.1| Putative sodium/bile acid symporter family protein [Collimonas fungivorans Ter331] Length = 339 Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust. Identities = 233/320 (72%), Positives = 270/320 (84%) Query: 1 MARPRFLPDNLTLMLFAVVLTASLFPCTGVVAVGFDWLTTFMIGLLFFMHGAKLSREAVI 60 M RPRFLPDN TL+L VL ASLFP G VAV F+ +TT IGLLFF+HGAKLSREAV+ Sbjct: 1 MVRPRFLPDNFTLLLVTTVLVASLFPAKGQVAVSFNLITTLAIGLLFFLHGAKLSREAVV 60 Query: 61 AGMVHWRLHVTVLLCTFAVFPVLGLILKPALLLVITPDLYLGILFLCVLPSTVQSSIAFT 120 G +HWRLH+TVLL TFA+FP+LGLI KP LL ++TPDLYLGILFLC LPSTVQSSIAFT Sbjct: 61 QGALHWRLHLTVLLATFALFPLLGLIFKPLLLPLVTPDLYLGILFLCTLPSTVQSSIAFT 120 Query: 121 SVARGNVPAAICAASASNLLGIFLTPLMVGVIIVAHNAEHSSLGSILKIVYQLLLPFVAG 180 SVARGNVPAA+C+ASASNLLGIFLTP++VG+++V H S SIL IV QLLLPFVAG Sbjct: 121 SVARGNVPAAVCSASASNLLGIFLTPVLVGLVVVTHAQGKGSFDSILNIVMQLLLPFVAG 180 Query: 181 QIARPWIGAWMDRNKSWLRWVDQSSVLLVVYVAFSEAVNQGLWRQVPPVMLVSLIVISCL 240 QIAR WI W+D++K L+ VDQ S+LLVVY AFSEAV QGLW+++PP+ LV LIV+ L Sbjct: 181 QIARRWICKWLDKHKIILKMVDQGSILLVVYTAFSEAVVQGLWQELPPLSLVGLIVVVAL 240 Query: 241 LLAIIMSITTFGSRRLGFNKEDEITIVFCGSKKSLASGVPMAKVLFASQTVGMVLLPLML 300 LL +++S+ T+ SRRLGF+KEDEITIVFCGSKKSLASGVPMAKVLFA TVGM++LPLML Sbjct: 241 LLFVMLSLATWISRRLGFSKEDEITIVFCGSKKSLASGVPMAKVLFAGHTVGMIVLPLML 300 Query: 301 FHQIQLMVCAILAQRYGNRP 320 FHQIQLMVCA+LAQRY RP Sbjct: 301 FHQIQLMVCAVLAQRYAARP 320 >ref|YP_001348622.1| hypothetical protein PSPA7_3262 [Pseudomonas aeruginosa PA7] gb|ABR84974.1| membrane protein, putative [Pseudomonas aeruginosa PA7] Length = 333 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 212/321 (66%), Positives = 262/321 (81%) Query: 1 MARPRFLPDNLTLMLFAVVLTASLFPCTGVVAVGFDWLTTFMIGLLFFMHGAKLSREAVI 60 M+RPRFLPDN TL L A VL A+ PC+G AV F+W+T IGLLFF+HGAKLSR+A+I Sbjct: 1 MSRPRFLPDNFTLALIATVLLATFLPCSGQTAVVFEWVTNIGIGLLFFLHGAKLSRQAII 60 Query: 61 AGMVHWRLHVTVLLCTFAVFPVLGLILKPALLLVITPDLYLGILFLCVLPSTVQSSIAFT 120 AGM HWRLH+ V CTF +FP+LGL LKPAL ++TP+LYLGILFLC LP+TVQSSIAFT Sbjct: 61 AGMTHWRLHLLVFACTFVMFPLLGLALKPALSPMVTPELYLGILFLCALPATVQSSIAFT 120 Query: 121 SVARGNVPAAICAASASNLLGIFLTPLMVGVIIVAHNAEHSSLGSILKIVYQLLLPFVAG 180 S+ARGNVPAA+C+AS S+LLG+FLTPL+V +++ A ++L +I KI QLL+PF+AG Sbjct: 121 SLARGNVPAAVCSASVSSLLGVFLTPLLVKLLLGAEGETGNALDAIGKITLQLLVPFIAG 180 Query: 181 QIARPWIGAWMDRNKSWLRWVDQSSVLLVVYVAFSEAVNQGLWRQVPPVMLVSLIVISCL 240 Q+ R WIGAW++RNK LR+VDQ S+LLVVY AFS AV QGLW +VP + L+ L V C+ Sbjct: 181 QVLRRWIGAWVERNKPVLRYVDQGSILLVVYTAFSAAVIQGLWHEVPWLALIGLTVACCV 240 Query: 241 LLAIIMSITTFGSRRLGFNKEDEITIVFCGSKKSLASGVPMAKVLFASQTVGMVLLPLML 300 +LA+ + +TT +RRLGF+KEDEITIVFCGSKKSLA+GVPMAKVLFA+ VG ++LPLML Sbjct: 241 ILALALVLTTVLARRLGFSKEDEITIVFCGSKKSLATGVPMAKVLFATSAVGPMVLPLML 300 Query: 301 FHQIQLMVCAILAQRYGNRPE 321 FHQIQLMVCA+LAQRY R + Sbjct: 301 FHQIQLMVCAVLAQRYARRRD 321 >ref|NP_250716.1| hypothetical protein PA2026 [Pseudomonas aeruginosa PAO1] ref|YP_002440885.1| putative transporter, bile acid/Na+ symporter family [Pseudomonas aeruginosa LESB58] ref|ZP_04933785.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] sp|P39879.2|Y2026_PSEAE RecName: Full=Uncharacterized protein PA2026 gb|AAG05414.1|AE004629_3 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] gb|EAZ57904.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] emb|CAW28023.1| putative transporter, bile acid/Na+ symporter family [Pseudomonas aeruginosa LESB58] gb|EGM20074.1| hypothetical protein PA13_10534 [Pseudomonas aeruginosa 138244] dbj|GAA17581.1| putative transporter, bile acid/Na+ symporter family [Pseudomonas aeruginosa NCMG1179] gb|AEO75501.1| putative transporter, bile acid/Na+ symporter family [Pseudomonas aeruginosa M18] Length = 333 Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust. Identities = 209/314 (66%), Positives = 258/314 (82%) Query: 1 MARPRFLPDNLTLMLFAVVLTASLFPCTGVVAVGFDWLTTFMIGLLFFMHGAKLSREAVI 60 M+RPRFLPDN TL L A VL A+ PC+G AV F+W+T IGLLFF+HGAKLSR+A+I Sbjct: 1 MSRPRFLPDNFTLALIATVLLATFLPCSGQTAVVFEWVTNIGIGLLFFLHGAKLSRQAII 60 Query: 61 AGMVHWRLHVTVLLCTFAVFPVLGLILKPALLLVITPDLYLGILFLCVLPSTVQSSIAFT 120 AGM HWRLH+ V CTF +FP+LGL LKPAL ++TP+LYLGILFLC LP+TVQSSIAFT Sbjct: 61 AGMTHWRLHLLVFACTFVMFPLLGLALKPALSPMVTPELYLGILFLCALPATVQSSIAFT 120 Query: 121 SVARGNVPAAICAASASNLLGIFLTPLMVGVIIVAHNAEHSSLGSILKIVYQLLLPFVAG 180 S+ARGNVPAA+C+AS S+LLG+FLTPL+V +++ A ++L +I KI QLL+PF+AG Sbjct: 121 SLARGNVPAAVCSASVSSLLGVFLTPLLVKLLLGAEGETGNALDAIGKITLQLLVPFIAG 180 Query: 181 QIARPWIGAWMDRNKSWLRWVDQSSVLLVVYVAFSEAVNQGLWRQVPPVMLVSLIVISCL 240 Q+ R WIGAW++RNK LR+VDQ S+LLVVY AFS AV QGLW +VP + L+ L V C+ Sbjct: 181 QVLRRWIGAWVERNKPVLRYVDQGSILLVVYTAFSAAVIQGLWHEVPWLALLGLTVACCV 240 Query: 241 LLAIIMSITTFGSRRLGFNKEDEITIVFCGSKKSLASGVPMAKVLFASQTVGMVLLPLML 300 +LA+ + +TT +RRLGF+KEDEITIVFCGSKKSLA+GVPMAKVLFA+ VG ++LPLML Sbjct: 241 ILALALVLTTVLARRLGFSKEDEITIVFCGSKKSLATGVPMAKVLFATSAVGPMVLPLML 300 Query: 301 FHQIQLMVCAILAQ 314 FHQIQLMVCA+LAQ Sbjct: 301 FHQIQLMVCAVLAQ 314 >ref|YP_791213.1| bile acid/Na+ symporter family transporter [Pseudomonas aeruginosa UCBPP-PA14] gb|ABJ11212.1| putative transporter, bile acid/Na+ symporter family [Pseudomonas aeruginosa UCBPP-PA14] Length = 333 Score = 411 bits (1056), Expect = e-113, Method: Compositional matrix adjust. Identities = 208/314 (66%), Positives = 258/314 (82%) Query: 1 MARPRFLPDNLTLMLFAVVLTASLFPCTGVVAVGFDWLTTFMIGLLFFMHGAKLSREAVI 60 M+RPRFLPDN TL L A VL A+ PC+G AV F+W+T IGLLFF+HGAKLSR+A++ Sbjct: 1 MSRPRFLPDNFTLALIATVLLATFLPCSGQTAVVFEWVTNIGIGLLFFLHGAKLSRQAIV 60 Query: 61 AGMVHWRLHVTVLLCTFAVFPVLGLILKPALLLVITPDLYLGILFLCVLPSTVQSSIAFT 120 AGM HWRLH+ V CTF +FP+LGL LKPAL ++TP+LYLGILFLC LP+TVQSSIAFT Sbjct: 61 AGMTHWRLHLLVFACTFVMFPLLGLALKPALSPMVTPELYLGILFLCALPATVQSSIAFT 120 Query: 121 SVARGNVPAAICAASASNLLGIFLTPLMVGVIIVAHNAEHSSLGSILKIVYQLLLPFVAG 180 S+ARGNVPAA+C+AS S+LLG+FLTPL+V +++ A ++L +I KI QLL+PF+AG Sbjct: 121 SLARGNVPAAVCSASVSSLLGVFLTPLLVKLLLGAEGETGNALDAIGKITLQLLVPFIAG 180 Query: 181 QIARPWIGAWMDRNKSWLRWVDQSSVLLVVYVAFSEAVNQGLWRQVPPVMLVSLIVISCL 240 Q+ R WIGAW++RNK LR+VDQ S+LLVVY AFS AV QGLW +VP + L+ L V C+ Sbjct: 181 QVLRRWIGAWVERNKPVLRYVDQGSILLVVYTAFSAAVIQGLWHEVPWLALLGLTVACCV 240 Query: 241 LLAIIMSITTFGSRRLGFNKEDEITIVFCGSKKSLASGVPMAKVLFASQTVGMVLLPLML 300 +LA+ + +TT +RRLGF+KEDEITIVFCGSKKSLA+GVPMAKVLFA+ VG ++LPLML Sbjct: 241 ILALALVLTTVLARRLGFSKEDEITIVFCGSKKSLATGVPMAKVLFATSAVGPMVLPLML 300 Query: 301 FHQIQLMVCAILAQ 314 FHQIQLMVCA+LAQ Sbjct: 301 FHQIQLMVCAVLAQ 314