BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0177.p         (124 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003776125.1| hypothetical protein Hsero_2721 [Herbaspiril...   169   1e-40
ref|ZP_02887726.1| conserved hypothetical protein [Burkholderia ...   155   2e-36
ref|YP_004028943.1| hypothetical protein RBRH_02877 [Burkholderi...   155   2e-36
ref|YP_004227644.1| hypothetical protein BC1001_1140 [Burkholder...   154   5e-36
ref|YP_001579257.1| hypothetical protein Bmul_1069 [Burkholderia...   154   6e-36

>ref|YP_003776125.1| hypothetical protein Hsero_2721 [Herbaspirillum seropedicae SmR1]
 gb|ADJ64217.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 113

 Score =  169 bits (428), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 81/90 (90%), Positives = 85/90 (94%)

Query: 35  ASDLLTFKLEMADGKFKPARIEVPAGQRIKIEIHNVGKTAAEFESVELRKEKVLAPGAQS 94
           AS+L TFKLEM DGK  P RIEVPAGQRIKIE+HN+GK+AAEFESVELRKEKVLAPGAQS
Sbjct: 24  ASELPTFKLEMQDGKLIPPRIEVPAGQRIKIEVHNIGKSAAEFESVELRKEKVLAPGAQS 83

Query: 95  FVVIAPLRPGEYKFFDDFHLNMPQGVIVAK 124
           FVVIAPLRPGEYKFFDDFHLNMPQGVIVAK
Sbjct: 84  FVVIAPLRPGEYKFFDDFHLNMPQGVIVAK 113


>ref|ZP_02887726.1| conserved hypothetical protein [Burkholderia graminis C4D1M]
 gb|EDT06680.1| conserved hypothetical protein [Burkholderia graminis C4D1M]
          Length = 110

 Score =  155 bits (393), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 84/110 (76%), Positives = 88/110 (80%), Gaps = 2/110 (1%)

Query: 16  RILATLIGLACS-LSAAAAFASDLLTFKLEMADGKFKPARIEVPAGQRIKIEIHNVGKTA 74
           RI   +  LA S L A AA A+DLLTFKLEM DGK  PARIEVPAGQRIKIE+ N GK A
Sbjct: 2   RINRKIAVLASSILLAGAAQAADLLTFKLEMNDGKLTPARIEVPAGQRIKIEVRNTGKGA 61

Query: 75  AEFESVELRKEKVLAPGAQSFVVIAPLRPGEYKFFDDFHLNMPQGVIVAK 124
           AEFESV+LRKEKVLAPGA SFVVIAPL PGEYKFFDDFH    QGVIVAK
Sbjct: 62  AEFESVQLRKEKVLAPGADSFVVIAPLSPGEYKFFDDFH-QQAQGVIVAK 110


>ref|YP_004028943.1| hypothetical protein RBRH_02877 [Burkholderia rhizoxinica HKI 454]
 emb|CBW74799.1| Hypothetical protein RBRH_02877 [Burkholderia rhizoxinica HKI 454]
          Length = 114

 Score =  155 bits (392), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 81/109 (74%), Positives = 89/109 (81%), Gaps = 6/109 (5%)

Query: 21  LIGLACSLSAAAAF-----ASDLLTFKLEMADGKFKPARIEVPAGQRIKIEIHNVGKTAA 75
           L G A  L+ +AAF     A+DL TF+LEMADGK  PARIEVPAGQRIKIE+HN GK A 
Sbjct: 7   LQGTAWLLAWSAAFGGVAHAADLPTFRLEMADGKLNPARIEVPAGQRIKIEVHNTGKGAV 66

Query: 76  EFESVELRKEKVLAPGAQSFVVIAPLRPGEYKFFDDFHLNMPQGVIVAK 124
           EFESV+LRKEKVLAPGA+SFVVIAPL PGEYKFFDDFH +  QGVIVAK
Sbjct: 67  EFESVQLRKEKVLAPGAESFVVIAPLSPGEYKFFDDFHQSA-QGVIVAK 114


>ref|YP_004227644.1| hypothetical protein BC1001_1140 [Burkholderia sp. CCGE1001]
 gb|ADX54584.1| hypothetical protein BC1001_1140 [Burkholderia sp. CCGE1001]
          Length = 110

 Score =  154 bits (389), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 81/110 (73%), Positives = 87/110 (79%), Gaps = 2/110 (1%)

Query: 16  RILATLIGLACSLS-AAAAFASDLLTFKLEMADGKFKPARIEVPAGQRIKIEIHNVGKTA 74
           RI   ++ LA S+  A AA A+DL TFKLEM DGK  P RIEVPAGQRIKIE+ N GK A
Sbjct: 2   RINRKIVALASSIVLAGAAHAADLPTFKLEMNDGKLTPTRIEVPAGQRIKIEVRNTGKGA 61

Query: 75  AEFESVELRKEKVLAPGAQSFVVIAPLRPGEYKFFDDFHLNMPQGVIVAK 124
           AEFESV+LRKEKVLAPGA SFVVIAPL PGEYKFFDDFH    QGVIVAK
Sbjct: 62  AEFESVQLRKEKVLAPGADSFVVIAPLSPGEYKFFDDFH-QQAQGVIVAK 110


>ref|YP_001579257.1| hypothetical protein Bmul_1069 [Burkholderia multivorans ATCC
           17616]
 ref|YP_001946626.1| putative periplasmic lipoprotein [Burkholderia multivorans ATCC
           17616]
 gb|ABX14760.1| conserved hypothetical protein [Burkholderia multivorans ATCC
           17616]
 dbj|BAG44090.1| probable periplasmic lipoprotein [Burkholderia multivorans ATCC
           17616]
          Length = 110

 Score =  154 bits (388), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 78/101 (77%), Positives = 83/101 (82%), Gaps = 1/101 (0%)

Query: 24  LACSLSAAAAFASDLLTFKLEMADGKFKPARIEVPAGQRIKIEIHNVGKTAAEFESVELR 83
           +A    A AA+A+DL TFKLEMADGK  PARIEVPAGQR KIEI N GK AAEFESV+LR
Sbjct: 11  VAAMWLAGAAYAADLPTFKLEMADGKLNPARIEVPAGQRFKIEIKNTGKGAAEFESVQLR 70

Query: 84  KEKVLAPGAQSFVVIAPLRPGEYKFFDDFHLNMPQGVIVAK 124
           KEKVLAPGA SFVV+APL PGEYKFFDDFH    QGVIVAK
Sbjct: 71  KEKVLAPGADSFVVVAPLSPGEYKFFDDFH-QQAQGVIVAK 110