BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0174.p (524 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_523479.1| methyl-accepting chemotaxis sensory transducer ... 466 e-129 ref|YP_002946068.1| methyl-accepting chemotaxis sensory transduc... 461 e-127 ref|ZP_04765383.1| methyl-accepting chemotaxis sensory transduce... 461 e-127 ref|YP_001351773.1| methyl-accepting chemotaxis protein [Janthin... 460 e-127 ref|YP_001351851.1| methyl-accepting chemotaxis transducer trans... 452 e-125 >ref|YP_523479.1| methyl-accepting chemotaxis sensory transducer [Rhodoferax ferrireducens T118] gb|ABD69948.1| methyl-accepting chemotaxis sensory transducer [Rhodoferax ferrireducens T118] Length = 583 Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust. Identities = 257/515 (49%), Positives = 353/515 (68%), Gaps = 5/515 (0%) Query: 5 KVGTRFAAGFGVVLLMMAIVAAMGIWRLQSVAEATNAMMQMPLAKERLISDWYSNISTSI 64 K+G R GF VVL ++ +G+W+L ++ AT M + PLAKERLISDW NI+ ++ Sbjct: 8 KIGKRLGFGFAVVLAFAVLITGIGVWQLNALGNATREMTREPLAKERLISDWSRNINVAV 67 Query: 65 TRTTAIARSTDLSLAGYFETATGDAAKNAAALQAKVQRLLDTPEEQKLFADIDANRKAYH 124 RTTA+A+S+D SL +F T + K+ +AL +++ LL + EE+ LF+ + RKAY Sbjct: 68 IRTTAVAKSSDPSLVPFFSTNAAEITKSTSALLKQIEPLLSSQEEKDLFSKVSDVRKAYL 127 Query: 125 EAGNTILALRAEGKLFQAKNAFEKNYLPSAARYQASVDKLLRLQRQGIDRVAGSIDATYR 184 + + + L+A+G+ +A E Y+P+A Y V + L LQR+ +D A I Sbjct: 128 SSRDQVTKLKADGQADEANRLLESTYIPAADNYMKLVSEFLGLQRKNLDAKAVEISGIET 187 Query: 185 SSRLVLLALSAAAVLFGIAAAIVLTRSLLRQLGGEPAYAVRVADRIASGDLTETIRLADN 244 +SR L+AL+A + FG+ A +LT + G AV VA R+A GDL I+ Sbjct: 188 TSRNYLVALAALVLTFGVICAWLLTVGIT----GPLTNAVAVARRVADGDLATDIQTEGK 243 Query: 245 DETS-LIHAMKTMQGNLARSVDHIKQSAETIGTASKEISVGNLNLSSRTERQAGSLQETA 303 DET+ L+ A+ M+ NLAR V +++Q +E + TAS EI+ GN +LS+RTE+QA +L+ETA Sbjct: 244 DETAQLLQALSAMKDNLARIVGNVRQGSEGVATASAEIAQGNNDLSARTEQQASALEETA 303 Query: 304 SVMQQLTSAVKKNAESALHANQLAASASQVAIAGGNAVNQMVGTMATINESSRKIVDIIS 363 + M++L++ V++NA++A ANQLA SAS VAI GG V+++V TM IN+SS+KI DII Sbjct: 304 ASMEELSATVRQNADNARQANQLAQSASTVAIKGGEVVSRVVETMKGINDSSKKISDIIQ 363 Query: 364 VINGIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRALAQRSAGAAKEIKSLIDDSVG 423 VI+GIAFQTNILALNAAVEAARAGEQGRGFAVVA+EVR+LA RSA AAKEIK LI+DSV Sbjct: 364 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAGRSADAAKEIKGLINDSVQ 423 Query: 424 KIVSGRTLVEEAGATIGQVVDSIRTLSDFVADISNASLEQSTGIEQVNQAIMQMDDVTQH 483 ++ G TLV++AG T+ +VV SIR ++D + +IS AS EQS G+ QV++A+ QMD VTQ Sbjct: 424 RVEQGSTLVDQAGVTMTEVVSSIRRVTDIMGEISAASTEQSQGVAQVSEAVTQMDQVTQQ 483 Query: 484 NAALVEEATAAAQSLLDQAGSLVTVVNTFKLSSSR 518 NAALVEE AAA SL QA LV V+ FKLS S+ Sbjct: 484 NAALVEEMAAAASSLKSQAQELVGTVSVFKLSQSQ 518 >ref|YP_002946068.1| methyl-accepting chemotaxis sensory transducer [Variovorax paradoxus S110] gb|ACS20802.1| methyl-accepting chemotaxis sensory transducer [Variovorax paradoxus S110] Length = 559 Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust. Identities = 272/515 (52%), Positives = 354/515 (68%), Gaps = 5/515 (0%) Query: 1 MKNWKVGTRFAAGFGVVLLMMAIVAAMGIWRLQSVAEATNAMMQMPLAKERLISDWYSNI 60 MKN K+GTR GF +VL +MA +A +G++RLQ V +A M+Q L KERL ++W N Sbjct: 1 MKNLKIGTRLGIGFALVLALMACIAGIGVFRLQGVGDAVQEMVQRSLVKERLAANWLLNT 60 Query: 61 STSITRTTAIARSTDLSLAGYFETATGDAAKNAAALQAKVQRLLDTPEEQKLFADIDANR 120 S++ RT A+ +S D + Y + + + QAK++ +LD+PEEQ + ADI R Sbjct: 61 SSNSVRTFALVKSNDAEVQDYLQKQMSKTSAGISETQAKLEAMLDSPEEQAISADIKEKR 120 Query: 121 KAYHEAGNTILALRAEGKLFQAKNAFEKNYLPSAARYQASVDKLLRLQRQGIDRVAGSID 180 Y NTIL L+AEGK +A +P Y AS+ +L Q + ID+ A ++D Sbjct: 121 SQYVGLRNTILKLKAEGKQEEAAALTNGKLVPMLEVYDASIRGMLTHQAERIDKAADAVD 180 Query: 181 ATYRSSRLVLLALSAAAVLFGIAAAIVLTRSLLRQLGGEPAYAVRVADRIASGDLTETIR 240 + R+ R+ ++ L+ AA+L G A +LTRS+ R L AVRVA +A GDLT I Sbjct: 181 SLNRAGRMNVIVLAMAALLLGGVLAWLLTRSITRPLN----EAVRVAQTVADGDLTSRIE 236 Query: 241 LADNDETS-LIHAMKTMQGNLARSVDHIKQSAETIGTASKEISVGNLNLSSRTERQAGSL 299 + DET L+ A+K M +LA V ++Q + I TAS EI+ GN +LSSRTE QA SL Sbjct: 237 SSSRDETGQLMLALKNMNASLATVVSGVRQGTDAIATASGEIAAGNQDLSSRTEEQASSL 296 Query: 300 QETASVMQQLTSAVKKNAESALHANQLAASASQVAIAGGNAVNQMVGTMATINESSRKIV 359 ++TA+ M++LTS VK+NA++A ANQLA SAS+VA+ GGN V Q+V TMA+IN SS+KIV Sbjct: 297 EQTAASMEELTSTVKQNADNARQANQLALSASEVAVKGGNVVGQVVDTMASINASSKKIV 356 Query: 360 DIISVINGIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRALAQRSAGAAKEIKSLID 419 DII VI+GIAFQTNILALNAAVEAARAGEQGRGFAVVA+EVR LAQRS AAKEIK LID Sbjct: 357 DIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSGAAAKEIKGLID 416 Query: 420 DSVGKIVSGRTLVEEAGATIGQVVDSIRTLSDFVADISNASLEQSTGIEQVNQAIMQMDD 479 DSVGK+ G LV EAG T+ ++V S++ ++D + +I+ AS EQSTGIEQVNQAI QMD Sbjct: 417 DSVGKVDMGSALVGEAGKTMAEIVGSVKRVTDIIGEITAASQEQSTGIEQVNQAIAQMDQ 476 Query: 480 VTQHNAALVEEATAAAQSLLDQAGSLVTVVNTFKL 514 VTQ NAALVEEA AAAQS+ +QA SLV V+ F+L Sbjct: 477 VTQQNAALVEEAAAAAQSMQEQAASLVGAVSVFRL 511 >ref|ZP_04765383.1| methyl-accepting chemotaxis sensory transducer [Acidovorax delafieldii 2AN] gb|EER57813.1| methyl-accepting chemotaxis sensory transducer [Acidovorax delafieldii 2AN] Length = 527 Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust. Identities = 265/516 (51%), Positives = 352/516 (68%), Gaps = 5/516 (0%) Query: 1 MKNWKVGTRFAAGFGVVLLMMAIVAAMGIWRLQSVAEATNAMMQMPLAKERLISDWYSNI 60 MKN K+GTR GF +VL +M ++ G+WRLQ+VA+ATN M Q PLA ER+ISDWY + Sbjct: 1 MKNLKIGTRLGGGFALVLALMVLMTLFGLWRLQTVAQATNDMTQQPLAMERMISDWYRYV 60 Query: 61 STSITRTTAIARSTDLSLAGYFETATGDAAKNAAALQAKVQRLLDTPEEQKLFADIDANR 120 + RTTAI +STD SLAG+F + + + LQ +++ LL P E++L+ I R Sbjct: 61 YSGARRTTAIVKSTDPSLAGFFAEDAAMSTRESGKLQDRIEPLLSNPAEKELWVTIKKAR 120 Query: 121 KAYHEAGNTILALRAEGKLFQAKNAFEKNYLPSAARYQASVDKLLRLQRQGIDRVAGSID 180 Y + + + +A+G+L +A+ + YLP+A +Y A + +LL LQR ID A I Sbjct: 121 VTYLSSRDQAVKAKADGQLEEAERTLTQVYLPAAEKYMALIQQLLDLQRASIDATAKDIQ 180 Query: 181 ATYRSSRLVLLALSAAAVLFGIAAAIVLTRSLLRQLGGEPAYAVRVADRIASGDLTETIR 240 Y SR+ L+ L AV G A LT + R L + AVRVA +A DLT T+ Sbjct: 181 GVYAESRMWLMLLCVLAVAVGGVCAWWLTHGITRPL----SEAVRVARAVADNDLTTTVE 236 Query: 241 LADNDET-SLIHAMKTMQGNLARSVDHIKQSAETIGTASKEISVGNLNLSSRTERQAGSL 299 + DET L+ A++ M +LA+ V ++ E I TAS +I GN +LSSRTE+QA SL Sbjct: 237 VHSRDETGQLMEALQHMNTSLAQVVGRVRAGTEGIATASNQIDAGNQDLSSRTEQQASSL 296 Query: 300 QETASVMQQLTSAVKKNAESALHANQLAASASQVAIAGGNAVNQMVGTMATINESSRKIV 359 +ETA+ M++LTS V++NA++A ANQLA+SASQVA+ GG V +V TM+ IN SSRKI Sbjct: 297 EETAASMEELTSTVRQNADNARQANQLASSASQVAMQGGQVVAHVVDTMSAINASSRKIA 356 Query: 360 DIISVINGIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRALAQRSAGAAKEIKSLID 419 DII VI+GIAFQTNILALNAAVEAARAGEQGRGFAVVA+EVR+LAQRSA AAK+IK+LID Sbjct: 357 DIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAAAAKDIKTLID 416 Query: 420 DSVGKIVSGRTLVEEAGATIGQVVDSIRTLSDFVADISNASLEQSTGIEQVNQAIMQMDD 479 +SVGK+ G V EAG T+ +VDS++ ++D +A+I+ AS EQS+GI+QV+QAI QMD Sbjct: 417 NSVGKVDEGTQQVAEAGKTMDAIVDSVKRVTDIMAEIAAASQEQSSGIDQVHQAISQMDQ 476 Query: 480 VTQHNAALVEEATAAAQSLLDQAGSLVTVVNTFKLS 515 VTQ NAALVEEA AA SL QA L V+ F+++ Sbjct: 477 VTQQNAALVEEAAAATGSLKAQAAQLAQAVSVFRIA 512 >ref|YP_001351773.1| methyl-accepting chemotaxis protein [Janthinobacterium sp. Marseille] gb|ABR89417.1| methyl-accepting chemotaxis protein [Janthinobacterium sp. Marseille] Length = 566 Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust. Identities = 265/518 (51%), Positives = 357/518 (68%), Gaps = 5/518 (0%) Query: 3 NWKVGTRFAAGFGVVLLMMAIVAAMGIWRLQSVAEATNAMMQMPLAKERLISDWYSNIST 62 N K+G R GFGVVL + +AA GI +L +V+ T +M+++P+AKER++SDW + Sbjct: 6 NMKIGARLMLGFGVVLALSIAIAADGIRQLHAVSAITRSMLELPIAKERMVSDWAAITKA 65 Query: 63 SITRTTAIARSTDLSLAGYFETATGDAAKNAAALQAKVQRLLDTPEEQKLFADIDANRKA 122 SI RT +A+S D +LA + D +K + + K++ LL+T +E++L+A I RK+ Sbjct: 66 SIARTIGVAKSADPALAQFSAKFAADDSKQSMEIIQKLEPLLNTDQEKELYAKILDVRKS 125 Query: 123 YHEAGNTILALRAEGKLFQAKNAFEKNYLPSAARYQASVDKLLRLQRQGIDRVAGSIDAT 182 + ++ L+ EGK +A F+ +LP+A ++ + + L+R+ +D + Sbjct: 126 FLAGREGVMKLKTEGKEAEAAKYFDTTFLPAADSFKNHFTEFVELERKQMDAGTAQLSDV 185 Query: 183 YRSSRLVLLALSAAAVLFGIAAAIVLTRSLLRQLGGEPAYAVRVADRIASGDLTETIRLA 242 +S L+ LSA + FGI A LT + R L AV A R+A GDLT I+ Sbjct: 186 EAASTRQLMLLSAMVLAFGIFCAWRLTIGITRPL----KTAVDAARRVAGGDLTNDIKAE 241 Query: 243 DNDETS-LIHAMKTMQGNLARSVDHIKQSAETIGTASKEISVGNLNLSSRTERQAGSLQE 301 DE L+ A+K M L R V ++ ETI TAS EI+ GNL+LSSRTE+QA SL+E Sbjct: 242 SKDECGQLLAALKDMNDGLQRIVGEVRLGTETITTASNEIAAGNLDLSSRTEQQASSLEE 301 Query: 302 TASVMQQLTSAVKKNAESALHANQLAASASQVAIAGGNAVNQMVGTMATINESSRKIVDI 361 TAS M++LTS VK+NA++A ANQLA SAS+VA+ GG+ V+Q+V TM++INESSRKIVDI Sbjct: 302 TASSMEELTSTVKQNADNARQANQLAVSASEVALKGGDVVSQVVQTMSSINESSRKIVDI 361 Query: 362 ISVINGIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRALAQRSAGAAKEIKSLIDDS 421 ISVI+GIAFQTNILALNAAVEAARAGEQGRGFAVVATEVR+LAQRSA AAKEIK+LI DS Sbjct: 362 ISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRSLAQRSASAAKEIKALIGDS 421 Query: 422 VGKIVSGRTLVEEAGATIGQVVDSIRTLSDFVADISNASLEQSTGIEQVNQAIMQMDDVT 481 VGK+ +G LV EAGAT+ ++V+SIR ++D + +I+ AS EQS GIEQ+NQAI QMD VT Sbjct: 422 VGKVDTGNKLVAEAGATMDEIVNSIRRVTDIMGEITAASQEQSAGIEQINQAIGQMDHVT 481 Query: 482 QHNAALVEEATAAAQSLLDQAGSLVTVVNTFKLSSSRE 519 Q NA+LVEEA AAA+S+ DQA L VV FKL +++E Sbjct: 482 QQNASLVEEAAAAAESMQDQARKLGQVVGAFKLDNAQE 519 >ref|YP_001351851.1| methyl-accepting chemotaxis transducer transmembrane protein [Janthinobacterium sp. Marseille] gb|ABR89391.1| methyl-accepting chemotaxis transducer transmembrane protein [Janthinobacterium sp. Marseille] Length = 568 Score = 452 bits (1162), Expect = e-125, Method: Compositional matrix adjust. Identities = 262/513 (51%), Positives = 355/513 (69%), Gaps = 5/513 (0%) Query: 3 NWKVGTRFAAGFGVVLLMMAIVAAMGIWRLQSVAEATNAMMQMPLAKERLISDWYSNIST 62 N K+ TR + GF ++L +M ++ +GI RLQ V + + M Q L KERL +W S + Sbjct: 5 NLKISTRLSFGFALLLTLMVMMTVVGILRLQEVGTSADVMTQTMLPKERLAQEWLSAVDV 64 Query: 63 SITRTTAIARSTDLSLAGYFETATGDAAKNAAALQAKVQRLLDTPEEQKLFADIDANRKA 122 + RT A A++T +F+ + A LQ +++ ++ TPE+++LF ++ R A Sbjct: 65 NGARTLASAKTTSAEDQAFFQKQMDKTSVRANELQKEIESMIKTPEDKRLFEELVVARNA 124 Query: 123 YHEAGNTILALRAEGKLFQAKNAFEKNYLPSAARYQASVDKLLRLQRQGIDRVAGSIDAT 182 Y + T+ L+AEGKL +A+ + LP+ Y S+D +L+ +++ ID SI + Sbjct: 125 YRDIRQTVFKLKAEGKLPEAQLLINEKMLPAMNAYSNSIDAVLQNEKKLIDEAGTSIQSA 184 Query: 183 YRSSRLVLLALSAAAVLFGIAAAIVLTRSLLRQLGGEPAYAVRVADRIASGDLTETIRLA 242 + S R +L+ L AAAV G+ A L S+ R L AV VA +ASGDL+ I ++ Sbjct: 185 FLSGRSLLIGLLAAAVALGVFFAWRLAISITRPLN----RAVTVARTVASGDLSAKIEVS 240 Query: 243 DNDET-SLIHAMKTMQGNLARSVDHIKQSAETIGTASKEISVGNLNLSSRTERQAGSLQE 301 NDET L+ A+K M +L ++V ++ ETI TAS++I+ GNL+LSSRTE QA SL E Sbjct: 241 SNDETGQLMQALKDMTQSLNKTVSEVRSGTETIATASRQIASGNLDLSSRTEEQASSLGE 300 Query: 302 TASVMQQLTSAVKKNAESALHANQLAASASQVAIAGGNAVNQMVGTMATINESSRKIVDI 361 TA+ M QLTS V++NA++A AN LA SAS VA+ GG+ V+++V TMA+INES+RKIVDI Sbjct: 301 TAASMGQLTSTVRQNADNARQANSLAMSASDVAVKGGSVVSEVVDTMASINESARKIVDI 360 Query: 362 ISVINGIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRALAQRSAGAAKEIKSLIDDS 421 ISVI+GIAFQTNILALNAAVEAARAGEQGRGFAVVA+EVR LAQRSA AAKEIK LI DS Sbjct: 361 ISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSAAAAKEIKILIGDS 420 Query: 422 VGKIVSGRTLVEEAGATIGQVVDSIRTLSDFVADISNASLEQSTGIEQVNQAIMQMDDVT 481 VGK+ +G LV EAG+T+ ++VDS++ ++D +A+I AS EQS+GI+QVNQAI QMD VT Sbjct: 421 VGKVEAGSKLVNEAGSTMNEIVDSVKRVTDIMAEIMAASQEQSSGIDQVNQAIGQMDQVT 480 Query: 482 QHNAALVEEATAAAQSLLDQAGSLVTVVNTFKL 514 Q NAALVEEA AAA+SL DQAG+L VV+ FKL Sbjct: 481 QQNAALVEEAAAAAESLQDQAGNLARVVSQFKL 513