BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0139.p (336 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004752202.1| methionine ABC transporter ATP-binding prote... 521 e-146 ref|YP_003774981.1| metal ion ABC transporter ATPase [Herbaspiri... 481 e-134 ref|YP_002355102.1| ABC transporter [Thauera sp. MZ1T] >gi|21750... 466 e-129 ref|YP_002796041.1| DL-methionine transporter ATP-binding subuni... 380 e-103 ref|YP_002769942.1| methionine ABC transporter ATP-binding prote... 380 e-103 >ref|YP_004752202.1| methionine ABC transporter ATP-binding protein [Collimonas fungivorans Ter331] gb|AEK61379.1| Methionine ABC transporter ATP-binding protein [Collimonas fungivorans Ter331] Length = 346 Score = 521 bits (1341), Expect = e-146, Method: Compositional matrix adjust. Identities = 260/346 (75%), Positives = 291/346 (84%), Gaps = 10/346 (2%) Query: 1 VIRIEHLHKTY------QVANRDLIALTDINLQIEAGEIFGVIGRSGAGKSTLIRTLNLL 54 +IRIEHLHKTY + A + AL+DINL I+ GEIFG+IGRSGAGKSTLIRTLN+L Sbjct: 1 MIRIEHLHKTYPLERNAKTAGTPVAALSDINLHIKKGEIFGIIGRSGAGKSTLIRTLNML 60 Query: 55 ERPSSGSIFIEDEDITRFDNAQLHALRQRVGMIFQHFNLLNAKTVAANIDWPLKITGKYT 114 ERPSSG + IE EDIT DN+ LH LRQR+GMIFQHFNLL AKTVAANIDWPLKITGKYT Sbjct: 61 ERPSSGKVLIEGEDITALDNSGLHRLRQRIGMIFQHFNLLGAKTVAANIDWPLKITGKYT 120 Query: 115 REQRAARVTELLELVGLTGHRDNYPAQLSGGQKQRVGIARALANYPHLLLCDEATSALDP 174 ++RAARV+ELL+LVGL HRD YPAQLSGGQKQRVGIARALAN PHLLLCDEATSALDP Sbjct: 121 PQERAARVSELLDLVGLGEHRDKYPAQLSGGQKQRVGIARALANTPHLLLCDEATSALDP 180 Query: 175 ETTQAILRLLLDINRKLGLTIVLITHEMQVIRSICDRVAVIDDSRIVESGKVADVFLHPQ 234 ETTQAILRLLLDINRKLGLTIVLITHEMQVIR+ICDRVAVI+ RIVESG+VA+VFLHPQ Sbjct: 181 ETTQAILRLLLDINRKLGLTIVLITHEMQVIRNICDRVAVIEAGRIVESGEVAEVFLHPQ 240 Query: 235 HAATQKLVAESHTFEQQDGI----GLEHIKGKLVRLTFVGDITYQPILTNITAATQALIT 290 HA TQ +VAES F + + G ++G LVRLT+VGDITYQPIL++I AAT ALIT Sbjct: 241 HAVTQSMVAESTPFSAETALLPATGASQLRGLLVRLTYVGDITYQPILSSIAAATPALIT 300 Query: 291 ILQGTISRIKDTPYGQLLVELNGSDDDLAKVFAHFDRYQIHHEVLA 336 ILQGTI+RIKDTPYGQLLVEL G D+A+VF D++ I HEVLA Sbjct: 301 ILQGTIARIKDTPYGQLLVELRGEPADVAQVFTTLDQHNIRHEVLA 346 >ref|YP_003774981.1| metal ion ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ63073.1| ABC-type metal ion transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 336 Score = 481 bits (1237), Expect = e-134, Method: Compositional matrix adjust. Identities = 234/336 (69%), Positives = 272/336 (80%) Query: 1 VIRIEHLHKTYQVANRDLIALTDINLQIEAGEIFGVIGRSGAGKSTLIRTLNLLERPSSG 60 +IRIE LHKTY+ RD+IAL DINL I GE+FG+IGRSGAGKSTLIRTLN+LERP SG Sbjct: 1 MIRIEQLHKTYRAGQRDIIALRDINLDIAQGEVFGIIGRSGAGKSTLIRTLNVLERPDSG 60 Query: 61 SIFIEDEDITRFDNAQLHALRQRVGMIFQHFNLLNAKTVAANIDWPLKITGKYTREQRAA 120 + I+ EDIT + L LRQRVGM+FQHFNLLNAKTVA NIDWPLKITG+Y+RE+RAA Sbjct: 61 RVLIDGEDITGLGHEALLGLRQRVGMVFQHFNLLNAKTVAQNIDWPLKITGRYSREERAA 120 Query: 121 RVTELLELVGLTGHRDNYPAQLSGGQKQRVGIARALANYPHLLLCDEATSALDPETTQAI 180 RV ELL+LVGL HRD YP+QLSGGQKQRVGIARALAN+P LLLCDEATSALDPETTQ+I Sbjct: 121 RVDELLQLVGLDAHRDQYPSQLSGGQKQRVGIARALANHPRLLLCDEATSALDPETTQSI 180 Query: 181 LRLLLDINRKLGLTIVLITHEMQVIRSICDRVAVIDDSRIVESGKVADVFLHPQHAATQK 240 LRLLL+INRKLGLTIVLITHEM+VIRSICDRVAV+D + E G+V D+FL PQHA T+ Sbjct: 181 LRLLLEINRKLGLTIVLITHEMEVIRSICDRVAVLDGGAVAEQGRVVDIFLRPQHAVTRS 240 Query: 241 LVAESHTFEQQDGIGLEHIKGKLVRLTFVGDITYQPILTNITAATQALITILQGTISRIK 300 L+ +SH ++ + + GKLVRLT+ GDI QPIL+ +TAAT AL TI++GT+SRIK Sbjct: 241 LLTQSHAWDAGESLYQRRPDGKLVRLTYAGDIAAQPILSQLTAATSALATIVRGTVSRIK 300 Query: 301 DTPYGQLLVELNGSDDDLAKVFAHFDRYQIHHEVLA 336 DTPYGQLLVE +G D LA+V I HEVLA Sbjct: 301 DTPYGQLLVEFSGDADALAQVLDRLQTSDIEHEVLA 336 >ref|YP_002355102.1| ABC transporter [Thauera sp. MZ1T] gb|ACK54206.1| ABC transporter related [Thauera sp. MZ1T] Length = 342 Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust. Identities = 232/341 (68%), Positives = 276/341 (80%), Gaps = 6/341 (1%) Query: 1 VIRIEHLHKTYQVAN-RDLIALTDINLQIEAGEIFGVIGRSGAGKSTLIRTLNLLERPSS 59 +IRIE+L KTY+ A+ R++ AL DI L+I AGE+FG+IGRSGAGKSTLIRTLNLLERPS+ Sbjct: 1 MIRIENLRKTYRAADGREVEALADIELEIGAGEVFGIIGRSGAGKSTLIRTLNLLERPSA 60 Query: 60 GSIFIEDEDITRFDNAQLHALRQRVGMIFQHFNLLNAKTVAANIDWPLKITGKYTREQRA 119 G + I+ EDIT D+ L+ALR+RVGMIFQHFNLL AKTVA NIDWPLK TG +RA Sbjct: 61 GRVLIDGEDITTLDSEGLYALRRRVGMIFQHFNLLGAKTVADNIDWPLKATGHTNAAERA 120 Query: 120 ARVTELLELVGLTGHRDNYPAQLSGGQKQRVGIARALANYPHLLLCDEATSALDPETTQA 179 RV ELL LVGL+ YP+QLSGGQKQRVGIARALAN P +LLCDEATSALDPETTQ+ Sbjct: 121 VRVKELLALVGLSEQGHKYPSQLSGGQKQRVGIARALANRPQILLCDEATSALDPETTQS 180 Query: 180 ILRLLLDINRKLGLTIVLITHEMQVIRSICDRVAVIDDSRIVESGKVADVFLHPQHAATQ 239 ILRLLLDINR+LGLTIVLITHEMQVIR+ICDRVAVID RIVESG+VADVFLHP+H T+ Sbjct: 181 ILRLLLDINRQLGLTIVLITHEMQVIRTICDRVAVIDGGRIVESGRVADVFLHPRHPVTR 240 Query: 240 KLVAESH-----TFEQQDGIGLEHIKGKLVRLTFVGDITYQPILTNITAATQALITILQG 294 +VA+S +F+ + ++G LVRLT++GD+TYQPIL+ I A + ITILQG Sbjct: 241 SMVAQSDALAAASFDPAHAYMKDKLRGTLVRLTYIGDVTYQPILSRIMAGAKVQITILQG 300 Query: 295 TISRIKDTPYGQLLVELNGSDDDLAKVFAHFDRYQIHHEVL 335 +S IKD P+GQLL+EL GS+DD+ +VFA DR+QIHHEVL Sbjct: 301 EVSSIKDVPFGQLLLELEGSEDDIREVFAELDRHQIHHEVL 341 >ref|YP_002796041.1| DL-methionine transporter ATP-binding subunit [Laribacter hongkongensis HLHK9] gb|ACO75032.1| ABC transporter [Laribacter hongkongensis HLHK9] Length = 337 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 188/328 (57%), Positives = 245/328 (74%), Gaps = 4/328 (1%) Query: 1 VIRIEHLHKTYQVAN-RDLIALTDINLQIEAGEIFGVIGRSGAGKSTLIRTLNLLERPSS 59 +I + + KTYQ + A+ +L IE GEIFG+IGRSGAGKSTL+R +NLLERP++ Sbjct: 1 MIELLEVEKTYQKPDGSQFQAVASTSLTIERGEIFGIIGRSGAGKSTLVRLINLLERPTA 60 Query: 60 GSIFIEDEDITRFDNAQLHALRQRVGMIFQHFNLLNAKTVAANIDWPLKITGKYTREQRA 119 G + I+ DITR D+ L A RQ++GMIFQHFNLL++KT+AAN+ +PL+I G++++ + Sbjct: 61 GRVLIDGNDITRLDSDGLRAARQQIGMIFQHFNLLSSKTIAANVAFPLQIAGRHSKADIS 120 Query: 120 ARVTELLELVGLTGHRDNYPAQLSGGQKQRVGIARALANYPHLLLCDEATSALDPETTQA 179 RVT+LLE VGL D YP+QLSGGQKQRVGIARALA P +LLCDEATSALDPETT++ Sbjct: 121 KRVTQLLERVGLAEQADKYPSQLSGGQKQRVGIARALATNPKILLCDEATSALDPETTRS 180 Query: 180 ILRLLLDINRKLGLTIVLITHEMQVIRSICDRVAVIDDSRIVESGKVADVFLHPQHAATQ 239 +LRLL +INR+LGLTIVLITHEM VIRSICD+VAV+D +VESG+ +DVFLHPQHA T+ Sbjct: 181 VLRLLAEINRELGLTIVLITHEMDVIRSICDKVAVLDAGHVVESGRASDVFLHPQHATTR 240 Query: 240 KLVAESHTFEQQDGIG-LEHIKGKLVRLTFVGDITYQPILTNITAATQALITILQGTISR 298 + V E+ ++ D ++ G++VRLTFVG+ TY+P LT + T IL G I R Sbjct: 241 RFVQEAENIDENDQYADFANVPGRIVRLTFVGERTYEPFLTRVARNTGMDFNILSGRIDR 300 Query: 299 IKDTPYGQLLVELNGS--DDDLAKVFAH 324 IKDTPYGQL++ L G DD +A++ H Sbjct: 301 IKDTPYGQLILSLVGGNQDDAIAQLVEH 328 >ref|YP_002769942.1| methionine ABC transporter ATP-binding protein [Brevibacillus brevis NBRC 100599] dbj|BAH41438.1| methionine ABC transporter ATP-binding protein [Brevibacillus brevis NBRC 100599] Length = 337 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 188/316 (59%), Positives = 240/316 (75%), Gaps = 4/316 (1%) Query: 1 VIRIEHLHKTYQVANRDLIALTDINLQIEAGEIFGVIGRSGAGKSTLIRTLNLLERPSSG 60 +I++ HLHK+YQV + + ALT I+L IE GEI+G+IG SGAGKSTLIR +NLLERP+SG Sbjct: 1 MIQLRHLHKSYQVQGKTIPALTGIDLSIEQGEIYGIIGHSGAGKSTLIRCINLLERPTSG 60 Query: 61 SIFIEDEDITRFDNAQLHALRQRVGMIFQHFNLLNAKTVAANIDWPLKITGKYTREQRAA 120 + ++ D+T+ D +L R+ +GMIFQHFNLL++ TV N+ +PLK+ K ++ + Sbjct: 61 EVIVDGVDLTKLDEGKLQEKRRAIGMIFQHFNLLSSSTVGENVAFPLKL-AKRSKAEIDK 119 Query: 121 RVTELLELVGLTGHRDNYPAQLSGGQKQRVGIARALANYPHLLLCDEATSALDPETTQAI 180 +V ELL+LVGL H+D YP+QLSGGQKQRVGIARALAN P +LLCDEATSALDP+TT +I Sbjct: 120 KVNELLKLVGLEAHKDKYPSQLSGGQKQRVGIARALANDPKVLLCDEATSALDPQTTNSI 179 Query: 181 LRLLLDINRKLGLTIVLITHEMQVIRSICDRVAVIDDSRIVESGKVADVFLHPQHAATQK 240 L LLLDINRKLGLTIVLITHEM VIRSICDRV VID +IVESG V DVFL P+H TQ+ Sbjct: 180 LALLLDINRKLGLTIVLITHEMHVIRSICDRVGVIDGGKIVESGNVLDVFLRPKHPTTQE 239 Query: 241 LVAE-SHTFEQQDGIGLEHIKGK--LVRLTFVGDITYQPILTNITAATQALITILQGTIS 297 V + + + E ++ + E G + R+TF+G+ TYQPIL T + +ILQGTIS Sbjct: 240 FVEQVADSTELREAVEHEKASGNRTIARVTFLGEKTYQPILFQTMQETGTVFSILQGTIS 299 Query: 298 RIKDTPYGQLLVELNG 313 R+KDTPYGQL++EL G Sbjct: 300 RMKDTPYGQLVIELEG 315