BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0127.p         (123 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775305.1| nitrite reductase ferredoxin subunit [Herbas...   199   9e-50
ref|YP_001100349.1| Rieske family iron-sulfur cluster-binding pr...   184   4e-45
ref|ZP_08272644.1| Iron-sulfur cluster-binding protein, Rieske f...   173   8e-42
ref|YP_001353039.1| hypothetical protein mma_1349 [Janthinobacte...   172   2e-41
ref|YP_004753539.1| iron-sulfur cluster-binding protein, Rieske ...   165   2e-39

>ref|YP_003775305.1| nitrite reductase ferredoxin subunit [Herbaspirillum seropedicae
           SmR1]
 gb|ADJ63397.1| nitrite reductase ferredoxin subunit protein [Herbaspirillum
           seropedicae SmR1]
          Length = 124

 Score =  199 bits (507), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 103/119 (86%)

Query: 5   AIQVCASAEIEEGGKGRRFAVSVHGDDATGFVVRYGGAVYGYLNRCAHVPIELDWAEGEF 64
           AI +CASAE+ EGG G+RF V V GD+A+GFVVRYGG VYGYLNRCAH+P+ELDWAEGEF
Sbjct: 6   AILICASAELVEGGLGKRFPVQVRGDEASGFVVRYGGVVYGYLNRCAHLPVELDWAEGEF 65

Query: 65  FESSGLYLMCATHGAVYAPDTGKCEGGPCTGARLRKIMVFEKDGAIFWAPDDYVRPALA 123
           FESSGLYLMCATHGAVYAPDTGKC GGPCTGA LRKIM  E++G +FW PDD V+P  A
Sbjct: 66  FESSGLYLMCATHGAVYAPDTGKCAGGPCTGAHLRKIMTVEREGQVFWRPDDVVKPVEA 124


>ref|YP_001100349.1| Rieske family iron-sulfur cluster-binding protein [Herminiimonas
           arsenicoxydans]
 emb|CAL62226.1| Putative iron-sulfur cluster-binding protein, Rieske family
           [Herminiimonas arsenicoxydans]
          Length = 123

 Score =  184 bits (467), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 84/123 (68%), Positives = 98/123 (79%)

Query: 1   MEEVAIQVCASAEIEEGGKGRRFAVSVHGDDATGFVVRYGGAVYGYLNRCAHVPIELDWA 60
           M  V I +C ++ +EEGGKG RF V+  GDDATGFVVRYGG    YLNRCAHVPIELDW 
Sbjct: 1   MTTVLIPICDASALEEGGKGIRFPVTAGGDDATGFVVRYGGLARAYLNRCAHVPIELDWN 60

Query: 61  EGEFFESSGLYLMCATHGAVYAPDTGKCEGGPCTGARLRKIMVFEKDGAIFWAPDDYVRP 120
           EG+FFESSGLYL+C+THGAVY P+TG+CEGGPC G  LR+I V EKD  +FW PD+YV+P
Sbjct: 61  EGDFFESSGLYLICSTHGAVYTPETGRCEGGPCRGRSLRRIEVMEKDNQVFWQPDEYVKP 120

Query: 121 ALA 123
           A A
Sbjct: 121 ARA 123


>ref|ZP_08272644.1| Iron-sulfur cluster-binding protein, Rieske family
           [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF33896.1| Iron-sulfur cluster-binding protein, Rieske family
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 124

 Score =  173 bits (438), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 82/117 (70%), Positives = 93/117 (79%)

Query: 5   AIQVCASAEIEEGGKGRRFAVSVHGDDATGFVVRYGGAVYGYLNRCAHVPIELDWAEGEF 64
           AI VC SA + EGG+G RFAV+  G DAT FV+R+ G VYGYLNRCAHVPIELDW EGEF
Sbjct: 6   AIPVCDSAAVIEGGRGVRFAVTSAGADATAFVIRFRGVVYGYLNRCAHVPIELDWVEGEF 65

Query: 65  FESSGLYLMCATHGAVYAPDTGKCEGGPCTGARLRKIMVFEKDGAIFWAPDDYVRPA 121
           FESSGLYLMCATHGA+YAP++G+CEGGPC G +LR I V E +G I W PD YV  A
Sbjct: 66  FESSGLYLMCATHGAIYAPESGRCEGGPCRGGKLRPIAVTEINGQIAWCPDSYVTAA 122


>ref|YP_001353039.1| hypothetical protein mma_1349 [Janthinobacterium sp. Marseille]
 gb|ABR90725.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 122

 Score =  172 bits (435), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 76/118 (64%), Positives = 93/118 (78%)

Query: 6   IQVCASAEIEEGGKGRRFAVSVHGDDATGFVVRYGGAVYGYLNRCAHVPIELDWAEGEFF 65
           I +C SA +E+GG G RF ++  G+DATGFVVRY G VYGYLNRCAH+PIELDW  GEFF
Sbjct: 5   ILICDSAALEDGGTGVRFPLTAGGEDATGFVVRYNGVVYGYLNRCAHIPIELDWNNGEFF 64

Query: 66  ESSGLYLMCATHGAVYAPDTGKCEGGPCTGARLRKIMVFEKDGAIFWAPDDYVRPALA 123
           E+ G YL+C+THGA+Y P+TG+C GGPC G RLR I+V EKD  +FW  D++VRPA A
Sbjct: 65  ETEGRYLICSTHGAIYLPETGRCAGGPCRGGRLRTIVVTEKDNQVFWQADEFVRPARA 122


>ref|YP_004753539.1| iron-sulfur cluster-binding protein, Rieske family [Collimonas
           fungivorans Ter331]
 gb|AEK62716.1| Iron-sulfur cluster-binding protein, Rieske family [Collimonas
           fungivorans Ter331]
          Length = 123

 Score =  165 bits (418), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 74/123 (60%), Positives = 92/123 (74%)

Query: 1   MEEVAIQVCASAEIEEGGKGRRFAVSVHGDDATGFVVRYGGAVYGYLNRCAHVPIELDWA 60
           M +  + +CAS+ + E GKG RFAV+  G++A  F VR+   V+ YLNRCAH+ +ELDW 
Sbjct: 1   MNDNRLPLCASSALAERGKGVRFAVTAWGEEAVAFAVRHHNVVHAYLNRCAHISLELDWN 60

Query: 61  EGEFFESSGLYLMCATHGAVYAPDTGKCEGGPCTGARLRKIMVFEKDGAIFWAPDDYVRP 120
           EGEFFESSGLYLMCATHGAVY P+TG C GGPC G RL KI+V E +  +FW PD+YVRP
Sbjct: 61  EGEFFESSGLYLMCATHGAVYEPETGHCAGGPCRGGRLHKILVEESNDQVFWIPDEYVRP 120

Query: 121 ALA 123
            +A
Sbjct: 121 VIA 123