BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0109.p         (99 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004753936.1| putative phosphate starvation-inducible prot...   124   4e-27
ref|YP_001895583.1| PsiF repeat-containing protein [Burkholderia...   109   1e-22
ref|YP_003775294.1| phosphate starvation-inducible protein [Herb...   109   1e-22
ref|YP_558770.1| putative phosphate starvation-inducible protein...   107   5e-22
ref|YP_983917.1| PsiF repeat-containing protein [Polaromonas nap...   107   6e-22

>ref|YP_004753936.1| putative phosphate starvation-inducible protein, PsiF [Collimonas
           fungivorans Ter331]
 gb|AEK63113.1| Putative phosphate starvation-inducible protein, PsiF [Collimonas
           fungivorans Ter331]
          Length = 150

 Score =  124 bits (311), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 69/99 (69%), Positives = 74/99 (74%), Gaps = 4/99 (4%)

Query: 1   MKKLIAALALVAPVMLAPVAMAQTQTAQQSKMTTCNKDATGKKGDERKAFMKDCLSNKPA 60
           MKKL     L    +  PV  A +Q   QSKM TCNKDATGK GD+RKAFMKDCLS KP 
Sbjct: 55  MKKLTGLALLACCFIFNPVFAANSQ---QSKMATCNKDATGKAGDDRKAFMKDCLSKKPE 111

Query: 61  APAAPATQQDKMKSCNKDATGKKGDDRKAFMKECLKKDK 99
           A AAPATQQ+KMKSCN DATGKKGDDRKAFMK+CL K K
Sbjct: 112 A-AAPATQQEKMKSCNVDATGKKGDDRKAFMKQCLSKPK 149


>ref|YP_001895583.1| PsiF repeat-containing protein [Burkholderia phytofirmans PsJN]
 gb|ACD16359.1| PsiF repeat protein [Burkholderia phytofirmans PsJN]
          Length = 99

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 61/95 (64%), Positives = 70/95 (73%), Gaps = 4/95 (4%)

Query: 1  MKKLIAALALVAPVMLAPVAMAQTQTAQQSKMTTCNKDATGKKGDERKAFMKDCLSNKPA 60
          ++  IA L L A ++ +PV     Q +QQ+KM  CNK A  KKGDERKAFMK CLS KPA
Sbjct: 3  IQSAIATLVLGAVLVSSPVF---AQNSQQTKMADCNKQAGDKKGDERKAFMKTCLSAKPA 59

Query: 61 APAAPATQQDKMKSCNKDATGKKGDDRKAFMKECL 95
          A AAP +QQDKMK+CN  ATGKKGDDRKAFMK CL
Sbjct: 60 A-AAPMSQQDKMKACNTQATGKKGDDRKAFMKSCL 93


>ref|YP_003775294.1| phosphate starvation-inducible protein [Herbaspirillum
          seropedicae SmR1]
 gb|ADJ63386.1| phosphate starvation-inducible protein [Herbaspirillum
          seropedicae SmR1]
          Length = 99

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/104 (65%), Positives = 76/104 (73%), Gaps = 10/104 (9%)

Query: 1  MKKLIAAL---ALVAPVMLAPVAMAQTQTAQQSKMTTCNKDAT--GKKGDERKAFMKDCL 55
          MKKL+ A+   AL AP+++A  AMA+   AQQ+KM  CN DAT  GKKGDERKAFM  CL
Sbjct: 1  MKKLLFAMTTFALAAPLLVASPAMAEN--AQQNKMKQCNADATASGKKGDERKAFMSSCL 58

Query: 56 SNKPAAPAAPATQQDKMKSCNKDATGKKGDDRKAFMKECLKKDK 99
            K  AP  PATQQDKMK CN DA GKKGD+RKAFM  CLKKDK
Sbjct: 59 --KKDAPK-PATQQDKMKQCNADAAGKKGDERKAFMSSCLKKDK 99


>ref|YP_558770.1| putative phosphate starvation-inducible protein, PsiF
          [Burkholderia xenovorans LB400]
 ref|ZP_06840705.1| PsiF repeat protein [Burkholderia sp. Ch1-1]
 gb|ABE30718.1| Putative phosphate starvation-inducible protein, PsiF
          [Burkholderia xenovorans LB400]
 gb|EFG71901.1| PsiF repeat protein [Burkholderia sp. Ch1-1]
          Length = 98

 Score =  107 bits (267), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 61/91 (67%), Positives = 69/91 (75%), Gaps = 5/91 (5%)

Query: 5  IAALALVAPVMLAPVAMAQTQTAQQSKMTTCNKDATGKKGDERKAFMKDCLSNKPAAPAA 64
          IA L L A V+++PV     Q +QQ+KM  CNK A  KKGD+RKAFMK CLS KPAA AA
Sbjct: 7  IATLVLGA-VLVSPVF---AQNSQQTKMADCNKQAGDKKGDDRKAFMKTCLSAKPAA-AA 61

Query: 65 PATQQDKMKSCNKDATGKKGDDRKAFMKECL 95
          P +QQDKMK+CN  ATGKKGDDRKAFMK CL
Sbjct: 62 PMSQQDKMKACNTQATGKKGDDRKAFMKSCL 92


>ref|YP_983917.1| PsiF repeat-containing protein [Polaromonas naphthalenivorans CJ2]
 gb|ABM38996.1| PsiF repeat protein [Polaromonas naphthalenivorans CJ2]
          Length = 114

 Score =  107 bits (267), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 54/73 (73%), Positives = 59/73 (80%)

Query: 25  QTAQQSKMTTCNKDATGKKGDERKAFMKDCLSNKPAAPAAPATQQDKMKSCNKDATGKKG 84
           +T QQSKM TCNK+ATGKKGDERKAFMK+CLS K    A  ATQQ KMK+CN +A GKKG
Sbjct: 42  KTGQQSKMATCNKEATGKKGDERKAFMKECLSAKKEVVAQDATQQSKMKTCNAEAKGKKG 101

Query: 85  DDRKAFMKECLKK 97
           D RKAFMKECL K
Sbjct: 102 DARKAFMKECLSK 114