BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0108.p         (146 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775293.1| threonine efflux protein [Herbaspirillum ser...   219   1e-55
ref|YP_549474.1| lysine exporter protein LysE/YggA [Polaromonas ...   195   2e-48
ref|ZP_08275534.1| putative homoserine/homoserine lactone efflux...   193   6e-48
ref|ZP_04762419.1| Lysine exporter protein (LYSE/YGGA) [Acidovor...   192   1e-47
ref|YP_987733.1| lysine exporter protein LysE/YggA [Acidovorax s...   179   2e-43

>ref|YP_003775293.1| threonine efflux protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ63385.1| threonine efflux protein [Herbaspirillum seropedicae SmR1]
          Length = 219

 Score =  219 bits (557), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 112/152 (73%), Positives = 125/152 (82%), Gaps = 8/152 (5%)

Query: 1   VASEAAFNTIKILGAAYLIYLGWSQWRSPVHVDEAQAARPAAPA--------AWWQRTVT 52
           VASE AFN IK+ GA YLIYLG+SQWR+ V  +E   A  AA A         WWQR +T
Sbjct: 66  VASETAFNVIKVAGALYLIYLGFSQWRARVPSEEQGEALDAANASARAHARQTWWQRCMT 125

Query: 53  GFLTNATNPKGIVFMVAVLPQFINHERSLWLQLLLMAITMVAVDLVVMHGYAFAASRMQR 112
           GFLTNATNPKGIVFMVAVLPQFI+H+R LWLQLL++A+TMVAVDLVVMHGYAFAASR+QR
Sbjct: 126 GFLTNATNPKGIVFMVAVLPQFIDHDRPLWLQLLVLAVTMVAVDLVVMHGYAFAASRLQR 185

Query: 113 FFRDAKAVRMQNRFFGGVLMLVGAGLFFFKRS 144
           FFR  KA+R QNRFFGGVLMLVGAGLFFFKR+
Sbjct: 186 FFRSQKAIRAQNRFFGGVLMLVGAGLFFFKRT 217


>ref|YP_549474.1| lysine exporter protein LysE/YggA [Polaromonas sp. JS666]
 gb|ABE44576.1| Lysine exporter protein (LYSE/YGGA) [Polaromonas sp. JS666]
          Length = 217

 Score =  195 bits (496), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 96/149 (64%), Positives = 116/149 (77%), Gaps = 3/149 (2%)

Query: 1   VASEAAFNTIKILGAAYLIYLGWSQWRSPVHVDEAQAARPAAPAA---WWQRTVTGFLTN 57
           +ASE AFN +KILGAAYL+Y+GWSQWRS   +       PA  A+     +R +TG LTN
Sbjct: 66  LASELAFNVVKILGAAYLMYIGWSQWRSSDAIMTNDVGAPATEASVPSSRKRCLTGLLTN 125

Query: 58  ATNPKGIVFMVAVLPQFINHERSLWLQLLLMAITMVAVDLVVMHGYAFAASRMQRFFRDA 117
           ATNPKGI+FMVAVLPQFI+  R LWLQLL++AIT VAVD VVMHGYAFAASR+Q  F++A
Sbjct: 126 ATNPKGILFMVAVLPQFISQGRPLWLQLLVIAITTVAVDTVVMHGYAFAASRLQPLFKNA 185

Query: 118 KAVRMQNRFFGGVLMLVGAGLFFFKRSPQ 146
           +A+++QNR FGG+LM VGAGLFF KR  Q
Sbjct: 186 RAIKVQNRLFGGLLMAVGAGLFFVKRGQQ 214


>ref|ZP_08275534.1| putative homoserine/homoserine lactone efflux protein
           [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF30998.1| putative homoserine/homoserine lactone efflux protein
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 213

 Score =  193 bits (491), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 96/146 (65%), Positives = 113/146 (77%), Gaps = 2/146 (1%)

Query: 1   VASEAAFNTIKILGAAYLIYLGWSQWRSPVHVDEAQAARPAAPA--AWWQRTVTGFLTNA 58
           +ASE AFN +KI+GA YLIYLG SQWR+ V VD+      AA     W +R +TGFLTNA
Sbjct: 66  LASEVAFNAVKIVGALYLIYLGISQWRARVDVDDTSPHLSAAADIPGWKKRLMTGFLTNA 125

Query: 59  TNPKGIVFMVAVLPQFINHERSLWLQLLLMAITMVAVDLVVMHGYAFAASRMQRFFRDAK 118
           TNPKGI+FMVAVLPQFI  E +L  QLL++ ITM A+DL+VMH YAFAAS MQR+FRDA+
Sbjct: 126 TNPKGIIFMVAVLPQFITGEAALLPQLLILGITMCAIDLMVMHSYAFAASSMQRYFRDAR 185

Query: 119 AVRMQNRFFGGVLMLVGAGLFFFKRS 144
           A++ QNRFFG VLM VGA LFF KRS
Sbjct: 186 AMKKQNRFFGSVLMAVGAALFFVKRS 211


>ref|ZP_04762419.1| Lysine exporter protein (LYSE/YGGA) [Acidovorax delafieldii 2AN]
 gb|EER60755.1| Lysine exporter protein (LYSE/YGGA) [Acidovorax delafieldii 2AN]
          Length = 212

 Score =  192 bits (489), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 96/150 (64%), Positives = 113/150 (75%), Gaps = 9/150 (6%)

Query: 1   VASEAAFNTIKILGAAYLIYLGWSQWR----SPVHVDEAQAARPAAPAAWWQRTVTGFLT 56
           +ASE AF+ +K+LGA YLIY+GWSQWR    SP+H DEA    PA P  W +R +TGFLT
Sbjct: 66  LASEVAFSVVKVLGACYLIYVGWSQWRAGAASPLHGDEAA---PAGP--WQKRCLTGFLT 120

Query: 57  NATNPKGIVFMVAVLPQFINHERSLWLQLLLMAITMVAVDLVVMHGYAFAASRMQRFFRD 116
           NATNPKGI+FMVAVLPQF+   R LW+QLL+MA T VAVD+ VMHGYA  AS ++   R 
Sbjct: 121 NATNPKGIIFMVAVLPQFMTDSRPLWMQLLVMAATTVAVDVTVMHGYAAGASALRSLMRS 180

Query: 117 AKAVRMQNRFFGGVLMLVGAGLFFFKRSPQ 146
           A+AVR QNR FGG+LM VGAGLFF KR  Q
Sbjct: 181 ARAVRTQNRVFGGLLMAVGAGLFFVKRGGQ 210


>ref|YP_987733.1| lysine exporter protein LysE/YggA [Acidovorax sp. JS42]
 gb|ABM43657.1| Lysine exporter protein (LYSE/YGGA) [Acidovorax sp. JS42]
          Length = 212

 Score =  179 bits (453), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 88/146 (60%), Positives = 110/146 (75%), Gaps = 1/146 (0%)

Query: 1   VASEAAFNTIKILGAAYLIYLGWSQWRSPVHVDEAQAARPAAPAAWWQRTVTGFLTNATN 60
           VASE AF+ +K+LGA YLIYLG+ QWR+       Q    A PA+W +R +TG LTNATN
Sbjct: 66  VASELAFSIVKVLGACYLIYLGFMQWRAGA-AGTLQGDLQAQPASWRRRVLTGLLTNATN 124

Query: 61  PKGIVFMVAVLPQFINHERSLWLQLLLMAITMVAVDLVVMHGYAFAASRMQRFFRDAKAV 120
           PKGI+FMVAVLPQF+   R LW QLL+MA+TM++VDL+VM+GYA +AS ++   R  +A+
Sbjct: 125 PKGIIFMVAVLPQFMTDTRPLWSQLLVMAVTMLSVDLIVMNGYAASASALRTLMRSGRAM 184

Query: 121 RMQNRFFGGVLMLVGAGLFFFKRSPQ 146
           R QNR FGG+LMLVGAGLFF KR  Q
Sbjct: 185 RTQNRVFGGLLMLVGAGLFFVKRGTQ 210