BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0104.p (214 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775288.1| 3-methyl-adenine DNA glycosylase II [Herbasp... 381 e-104 ref|YP_004752989.1| DNA-3-methyladenine glycosylase II [Collimon... 352 2e-95 ref|YP_001353797.1| DNA-3-methyladenine glycosylase II [Janthino... 352 3e-95 ref|ZP_08274355.1| DNA-3-methyladenine glycosylase II [Oxalobact... 344 6e-93 emb|CAL61460.2| Putative DNA-3-methyladenine glycosylase [Hermin... 343 7e-93 >ref|YP_003775288.1| 3-methyl-adenine DNA glycosylase II [Herbaspirillum seropedicae SmR1] gb|ADJ63380.1| 3-methyl-adenine DNA glycosylase II protein [Herbaspirillum seropedicae SmR1] Length = 219 Score = 381 bits (978), Expect = e-104, Method: Compositional matrix adjust. Identities = 182/208 (87%), Positives = 192/208 (92%) Query: 3 KNNPADPAISVPAYWEDAKAELMKRDRIMRKLIPQFGDLQLTGRGDAFTTLARSIIGQQI 62 K + DP++ VPAYWE+AKAELMKRDRIMRK+IPQFGDLQLT RGDAFTTLARS+IGQQI Sbjct: 6 KASDVDPSLIVPAYWEEAKAELMKRDRIMRKIIPQFGDLQLTVRGDAFTTLARSVIGQQI 65 Query: 63 STKSAQAVWQRFLEACPKCMPAQVIKAGPENLVACGLSKRKAEYILDLANHFKAKTVHPD 122 STK+A AVWQRFLEACP+C P QVI+ GPE L CGLSKRKAEYILDLA HFKAKTVHPD Sbjct: 66 STKAANAVWQRFLEACPRCTPGQVIRTGPEGLAGCGLSKRKAEYILDLAAHFKAKTVHPD 125 Query: 123 KWAEMEDEDVIAEMLQIRGIGRWTAEMFLIFNLLRPNVLPLDDPGLLKGISDSYFSGEPV 182 KWAEMEDE VIAEM+QIRGIGRWTAEMFLIFNLLRPNVLPLDD GLLKGIS SYFSGEPV Sbjct: 126 KWAEMEDEAVIAEMIQIRGIGRWTAEMFLIFNLLRPNVLPLDDLGLLKGISISYFSGEPV 185 Query: 183 SRSDAREVAANWEPWRTVATWYLWRSLD 210 SRSDAREVAANWEPWRTVATWYLWRSLD Sbjct: 186 SRSDAREVAANWEPWRTVATWYLWRSLD 213 >ref|YP_004752989.1| DNA-3-methyladenine glycosylase II [Collimonas fungivorans Ter331] gb|AEK62166.1| DNA-3-methyladenine glycosylase II [Collimonas fungivorans Ter331] Length = 221 Score = 352 bits (903), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 164/214 (76%), Positives = 187/214 (87%) Query: 1 MIKNNPADPAISVPAYWEDAKAELMKRDRIMRKLIPQFGDLQLTGRGDAFTTLARSIIGQ 60 M K D VP+YWEDAKAELMKRDRIMRKLIPQFGDL L GRG+AFTTLARS++GQ Sbjct: 1 MQKAIAVDSRFFVPSYWEDAKAELMKRDRIMRKLIPQFGDLHLVGRGEAFTTLARSVVGQ 60 Query: 61 QISTKSAQAVWQRFLEACPKCMPAQVIKAGPENLVACGLSKRKAEYILDLANHFKAKTVH 120 Q+S K+A++ WQ+FL CPK PAQV+KAGPE L ACGLSKRKA+YILDLA+HFKAK V+ Sbjct: 61 QVSVKAAESAWQKFLLVCPKTTPAQVLKAGPEQLAACGLSKRKADYILDLADHFKAKRVN 120 Query: 121 PDKWAEMEDEDVIAEMLQIRGIGRWTAEMFLIFNLLRPNVLPLDDPGLLKGISDSYFSGE 180 ++W EM+DEDVIA++ QIRGIGRWTAEMFLIFNLLRPN+LPLDD GLLKGIS +YFSGE Sbjct: 121 AEQWMEMDDEDVIADLTQIRGIGRWTAEMFLIFNLLRPNILPLDDLGLLKGISVNYFSGE 180 Query: 181 PVSRSDAREVAANWEPWRTVATWYLWRSLDGAAS 214 PVSRSDAREV+ANWEPWRTVATWYLWRSLD ++ Sbjct: 181 PVSRSDAREVSANWEPWRTVATWYLWRSLDATSA 214 >ref|YP_001353797.1| DNA-3-methyladenine glycosylase II [Janthinobacterium sp. Marseille] gb|ABR88746.1| DNA-3-methyladenine glycosylase II [Janthinobacterium sp. Marseille] Length = 215 Score = 352 bits (902), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 170/210 (80%), Positives = 186/210 (88%), Gaps = 1/210 (0%) Query: 1 MIKNNPADPAISVPAYWEDAKAELMKRDRIMRKLIPQFGDLQLTGRGDAFTTLARSIIGQ 60 M K D +PAYWE+AKAELMKRDRI+RKLIPQFGDL L GRG+AF+TLARSIIGQ Sbjct: 1 MGKTIATDETRILPAYWEEAKAELMKRDRILRKLIPQFGDLHLVGRGEAFSTLARSIIGQ 60 Query: 61 QISTKSAQAVWQRFLEACPKCMPAQVIKAGPENLVACGLSKRKAEYILDLANHFKAKTVH 120 QISTK+A +VWQRFLE CPKC PAQVIKAG + L CGLSKRKAEYI DLA+HFKAK V+ Sbjct: 61 QISTKAADSVWQRFLEVCPKCTPAQVIKAG-DKLATCGLSKRKAEYIFDLADHFKAKRVN 119 Query: 121 PDKWAEMEDEDVIAEMLQIRGIGRWTAEMFLIFNLLRPNVLPLDDPGLLKGISDSYFSGE 180 DKWAEMEDE+VIAE++QIRGIGRWTAEMFLIFNLLRPN+LPLDD GLL GIS +YFSGE Sbjct: 120 CDKWAEMEDEEVIAELIQIRGIGRWTAEMFLIFNLLRPNILPLDDLGLLAGISRNYFSGE 179 Query: 181 PVSRSDAREVAANWEPWRTVATWYLWRSLD 210 PVSRSDAREVAANWEP+RTVATWYLWRSLD Sbjct: 180 PVSRSDAREVAANWEPYRTVATWYLWRSLD 209 >ref|ZP_08274355.1| DNA-3-methyladenine glycosylase II [Oxalobacteraceae bacterium IMCC9480] gb|EGF32178.1| DNA-3-methyladenine glycosylase II [Oxalobacteraceae bacterium IMCC9480] Length = 216 Score = 344 bits (882), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 162/200 (81%), Positives = 176/200 (88%) Query: 11 ISVPAYWEDAKAELMKRDRIMRKLIPQFGDLQLTGRGDAFTTLARSIIGQQISTKSAQAV 70 + P YWEDAK ELMKRDRIMRKLIPQFGD+ LTGRG+ F TLARSIIGQQIS KSA+A Sbjct: 11 LGAPGYWEDAKIELMKRDRIMRKLIPQFGDVHLTGRGEPFVTLARSIIGQQISVKSAEAA 70 Query: 71 WQRFLEACPKCMPAQVIKAGPENLVACGLSKRKAEYILDLANHFKAKTVHPDKWAEMEDE 130 WQRFL CPK PAQV+KAG +L CGLSKRKA+YILDLA HFKAK VH DKWAEM+DE Sbjct: 71 WQRFLLVCPKSTPAQVVKAGAADLAGCGLSKRKADYILDLAEHFKAKRVHADKWAEMDDE 130 Query: 131 DVIAEMLQIRGIGRWTAEMFLIFNLLRPNVLPLDDPGLLKGISDSYFSGEPVSRSDAREV 190 VIAE++QIRGIGRWTAEMFLIFNLLRPN+LPLDD GLL GIS +YFSGEPVSRSDAREV Sbjct: 131 AVIAELIQIRGIGRWTAEMFLIFNLLRPNILPLDDVGLLNGISLNYFSGEPVSRSDAREV 190 Query: 191 AANWEPWRTVATWYLWRSLD 210 +ANWEPWRTVATWYLWRSL+ Sbjct: 191 SANWEPWRTVATWYLWRSLE 210 >emb|CAL61460.2| Putative DNA-3-methyladenine glycosylase [Herminiimonas arsenicoxydans] Length = 215 Score = 343 bits (881), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 165/214 (77%), Positives = 184/214 (85%), Gaps = 1/214 (0%) Query: 1 MIKNNPADPAISVPAYWEDAKAELMKRDRIMRKLIPQFGDLQLTGRGDAFTTLARSIIGQ 60 M K D +P YWE+AK ELMKRDRIMRKLIPQFGDL L RG+ F+TLARSIIGQ Sbjct: 1 MGKMTATDETRILPVYWEEAKVELMKRDRIMRKLIPQFGDLHLASRGEPFSTLARSIIGQ 60 Query: 61 QISTKSAQAVWQRFLEACPKCMPAQVIKAGPENLVACGLSKRKAEYILDLANHFKAKTVH 120 QIS K+A +VWQRFLE CPKC P QVIKAG + L +CGLSKRK+EYILDLA+HFKAK V+ Sbjct: 61 QISVKAADSVWQRFLEICPKCTPVQVIKAG-DKLASCGLSKRKSEYILDLADHFKAKRVN 119 Query: 121 PDKWAEMEDEDVIAEMLQIRGIGRWTAEMFLIFNLLRPNVLPLDDPGLLKGISDSYFSGE 180 DKWAEMEDEDVIA+++QIRGIGRWTAEMFLIFNLLRPN+LPLDD GLL GIS +YFSGE Sbjct: 120 CDKWAEMEDEDVIADLIQIRGIGRWTAEMFLIFNLLRPNILPLDDVGLLAGISRNYFSGE 179 Query: 181 PVSRSDAREVAANWEPWRTVATWYLWRSLDGAAS 214 PVSRSDAREVAANWEP+RTVATWYLWRSLD ++ Sbjct: 180 PVSRSDAREVAANWEPYRTVATWYLWRSLDAVSA 213