BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0095.p         (143 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001099579.1| tRNA (guanosine-2'-O-)-methyltransferase [He...   198   2e-49
ref|ZP_08276137.1| 23S rRNA (guanosine-2'-O-) -methyltransferase...   197   4e-49
ref|YP_003775280.1| tRNA/rRNA methyltransferase [Herbaspirillum ...   196   1e-48
ref|YP_001353804.1| RNA methyltransferase [Janthinobacterium sp....   196   1e-48
ref|YP_004752996.1| putative tRNA/rRNA methyltransferase [Collim...   196   1e-48

>ref|YP_001099579.1| tRNA (guanosine-2'-O-)-methyltransferase [Herminiimonas
           arsenicoxydans]
 emb|CAL61452.1| 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB (23S rRNA Gm2251
           2'-O-methyltransferase) [Herminiimonas arsenicoxydans]
          Length = 247

 Score =  198 bits (503), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 94/117 (80%), Positives = 106/117 (90%)

Query: 1   MIFGFHAVTSRIRHEASSVEELYVDADRNDARMRDLLHAAKAAGVRIIQADDQRLSNIVG 60
           MIFGFHAVT+R+RHEASSVEE+Y+DA R+D RM+DL+ AA+AA VRII ADD RLS+IVG
Sbjct: 5   MIFGFHAVTARLRHEASSVEEIYIDASRHDQRMKDLIRAAEAAKVRIIAADDARLSSIVG 64

Query: 61  TRRHQGVVAKAGELSLARNLDELLDVVEGPPLLLILDGITDPHNLGACLRVGGGGGG 117
           TRRHQGVVAKAGELSLARNLDELLD ++GPPLLL+LDGITDPHNLGACLRV  G G 
Sbjct: 65  TRRHQGVVAKAGELSLARNLDELLDAIDGPPLLLVLDGITDPHNLGACLRVADGAGA 121


>ref|ZP_08276137.1| 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB
           [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF30394.1| 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 242

 Score =  197 bits (501), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 92/116 (79%), Positives = 105/116 (90%)

Query: 1   MIFGFHAVTSRIRHEASSVEELYVDADRNDARMRDLLHAAKAAGVRIIQADDQRLSNIVG 60
           MIFGFHAVT+R+RHEAS+VEE+YVD  R+D RM+D+L AA A  VR+IQADDQRLSN+VG
Sbjct: 1   MIFGFHAVTARLRHEASTVEEIYVDTARHDQRMKDMLKAAAAVKVRVIQADDQRLSNMVG 60

Query: 61  TRRHQGVVAKAGELSLARNLDELLDVVEGPPLLLILDGITDPHNLGACLRVGGGGG 116
           TRRHQGVVAKAGE+SLARNLDELLD ++GPPLLL+LDGITDPHNLGACLRV  G G
Sbjct: 61  TRRHQGVVAKAGEVSLARNLDELLDAIDGPPLLLVLDGITDPHNLGACLRVADGAG 116


>ref|YP_003775280.1| tRNA/rRNA methyltransferase [Herbaspirillum seropedicae SmR1]
 gb|ADJ63372.1| tRNA/rRNA methyltransferase protein [Herbaspirillum seropedicae
           SmR1]
          Length = 245

 Score =  196 bits (497), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 97/117 (82%), Positives = 102/117 (87%)

Query: 1   MIFGFHAVTSRIRHEASSVEELYVDADRNDARMRDLLHAAKAAGVRIIQADDQRLSNIVG 60
           MIFGFHAVTSRIRHEASSV+E+YVDA+R D RM DLLHAAK A VRIIQADDQRL+ +VG
Sbjct: 5   MIFGFHAVTSRIRHEASSVDEIYVDAERRDRRMLDLLHAAKEANVRIIQADDQRLAAMVG 64

Query: 61  TRRHQGVVAKAGELSLARNLDELLDVVEGPPLLLILDGITDPHNLGACLRVGGGGGG 117
           TRRHQGVVAKA  LSLAR LDELLD V GPPLLLILDGITDPHNLGACLRV  G G 
Sbjct: 65  TRRHQGVVAKAAALSLARTLDELLDAVVGPPLLLILDGITDPHNLGACLRVADGAGA 121


>ref|YP_001353804.1| RNA methyltransferase [Janthinobacterium sp. Marseille]
 gb|ABR89784.1| RNA methyltransferase, TrmH family [Janthinobacterium sp.
           Marseille]
          Length = 247

 Score =  196 bits (497), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 94/116 (81%), Positives = 105/116 (90%)

Query: 1   MIFGFHAVTSRIRHEASSVEELYVDADRNDARMRDLLHAAKAAGVRIIQADDQRLSNIVG 60
           MIFGFHAVT+R+RHEASSVEE+Y+DA R+D RM+DL+ AA+ A VRII ADD RLS+IVG
Sbjct: 5   MIFGFHAVTARLRHEASSVEEIYIDAGRHDQRMKDLIRAAEGAKVRIIPADDARLSSIVG 64

Query: 61  TRRHQGVVAKAGELSLARNLDELLDVVEGPPLLLILDGITDPHNLGACLRVGGGGG 116
           TRRHQGVVAKAGELSLARNLDELLD +EGPPLLL+LDGITDPHNLGACLRV  G G
Sbjct: 65  TRRHQGVVAKAGELSLARNLDELLDAIEGPPLLLVLDGITDPHNLGACLRVADGAG 120


>ref|YP_004752996.1| putative tRNA/rRNA methyltransferase [Collimonas fungivorans
           Ter331]
 gb|AEK62173.1| putative tRNA/rRNA methyltransferase [Collimonas fungivorans
           Ter331]
          Length = 247

 Score =  196 bits (497), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 95/116 (81%), Positives = 104/116 (89%)

Query: 1   MIFGFHAVTSRIRHEASSVEELYVDADRNDARMRDLLHAAKAAGVRIIQADDQRLSNIVG 60
           MIFGFHAVT+R+RHEASSVEE+YVDA R D RM++LL+AAKA GVR+I  DD RLSNIVG
Sbjct: 5   MIFGFHAVTARLRHEASSVEEIYVDAGRVDRRMQELLNAAKAVGVRVIPVDDARLSNIVG 64

Query: 61  TRRHQGVVAKAGELSLARNLDELLDVVEGPPLLLILDGITDPHNLGACLRVGGGGG 116
           TRRHQGVVAKAGELSLARNLDELLD + GPPLLL+LDGITDPHNLGACLRV  G G
Sbjct: 65  TRRHQGVVAKAGELSLARNLDELLDAIVGPPLLLVLDGITDPHNLGACLRVADGAG 120