BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0084.p (416 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776337.1| transmembrane efflux transmembrane protein [... 446 e-123 ref|YP_001633133.1| putative transmembrane efflux protein of the... 408 e-112 ref|NP_879170.1| transporter [Bordetella pertussis Tohama I] >gi... 379 e-103 ref|NP_105039.1| transmembrane efflux protein [Mesorhizobium lot... 360 3e-97 ref|YP_001856654.1| major facilitator transporter [Burkholderia ... 351 1e-94 >ref|YP_003776337.1| transmembrane efflux transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ64429.1| transmembrane efflux transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 395 Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust. Identities = 239/291 (82%), Positives = 260/291 (89%) Query: 1 MPIALWALAISAFAIGTTEFVIMGLLPEVAANLGTTLSSAGLLVTGYALGVFVGAPLVTA 60 MPIALWAL ISAFAIGTTEFVIMGLLPEVAANLG +LSSAGLLVTGYALGVFVGAPL+TA Sbjct: 1 MPIALWALTISAFAIGTTEFVIMGLLPEVAANLGVSLSSAGLLVTGYALGVFVGAPLLTA 60 Query: 61 TTGKLPRKTLLVSLMVLFVIGNIGCAIAPDYTTLMISRIVASFSHGAFFGVGSVVATGLV 120 TTG+LPRKTLLV+LMV+FV+GN+ CAIAPDYTTLMI R+VASF+HGAFFGVGSVVAT LV Sbjct: 61 TTGRLPRKTLLVALMVVFVVGNLACAIAPDYTTLMIGRVVASFAHGAFFGVGSVVATSLV 120 Query: 121 PKEKQASAIALMFTGLTVANVLGVPFGTWLGQMYGWRSTFWAVSAIGVVALLATAYLVPR 180 PKEKQASAIALMFTGLTVANVLGVPFGTWLGQ YGWR+TFWAV+ IGV+AL ATA LVPR Sbjct: 121 PKEKQASAIALMFTGLTVANVLGVPFGTWLGQSYGWRATFWAVTVIGVIALAATAVLVPR 180 Query: 181 SDDRQDADFRSELRVLGRPQVLLGLLMTVLGFGGVFAAFTYIAPILTDITGFQPGAVSPI 240 S ++ DF E+RVL RPQV+LGLLMTVLGFGGVFAAFTYIAPILTD++GF AVSPI Sbjct: 181 SQGGEETDFGKEVRVLMRPQVMLGLLMTVLGFGGVFAAFTYIAPILTDLSGFPASAVSPI 240 Query: 241 LLLFGVGLVGGNLLGGKFADKYLMPTLVISLVLLAGVLVLFSFTSHYKLAA 291 LLLFG+GLV GNL GGK ADK LM TL+ SLVLLA VLVLF T K+AA Sbjct: 241 LLLFGLGLVIGNLAGGKLADKKLMATLLGSLVLLAAVLVLFGLTVDNKVAA 291 >ref|YP_001633133.1| putative transmembrane efflux protein of the MFS type [Bordetella petrii DSM 12804] emb|CAP44866.1| putative Transmembrane efflux protein of the MFS type [Bordetella petrii] Length = 387 Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust. Identities = 209/291 (71%), Positives = 238/291 (81%) Query: 1 MPIALWALAISAFAIGTTEFVIMGLLPEVAANLGTTLSSAGLLVTGYALGVFVGAPLVTA 60 MPIALWALA+ AF IGTTEFVIMGLLPEV A+LG +LSSAGLLVTGYALGV VGAP V Sbjct: 1 MPIALWALAVGAFGIGTTEFVIMGLLPEVGADLGVSLSSAGLLVTGYALGVVVGAPPVAI 60 Query: 61 TTGKLPRKTLLVSLMVLFVIGNIGCAIAPDYTTLMISRIVASFSHGAFFGVGSVVATGLV 120 T ++PRKTLL++LMV+F +GN+ CA+AP Y TLM +R++ S +HGAFFGVGSVVAT LV Sbjct: 61 LTTRMPRKTLLLALMVIFTLGNLACALAPGYGTLMAARVLTSLAHGAFFGVGSVVATSLV 120 Query: 121 PKEKQASAIALMFTGLTVANVLGVPFGTWLGQMYGWRSTFWAVSAIGVVALLATAYLVPR 180 EKQASAIALMFTGLT+ANVLGVPFGTWLGQ +GWR+TFWAV+ +G+VA+LA A VPR Sbjct: 121 KPEKQASAIALMFTGLTLANVLGVPFGTWLGQAWGWRATFWAVTVVGIVAMLAIATWVPR 180 Query: 181 SDDRQDADFRSELRVLGRPQVLLGLLMTVLGFGGVFAAFTYIAPILTDITGFQPGAVSPI 240 S + D ELR L RPQVLLG MTVLGFGGVF AFTYIAP+LT++ GF PGAVSPI Sbjct: 181 SRGDRGGDLMGELRALSRPQVLLGFAMTVLGFGGVFTAFTYIAPLLTELAGFSPGAVSPI 240 Query: 241 LLLFGVGLVGGNLLGGKFADKYLMPTLVISLVLLAGVLVLFSFTSHYKLAA 291 LLLFGVGLV GN GGK AD+ LMPTLV SL LLA VL +FS T H + AA Sbjct: 241 LLLFGVGLVAGNTYGGKLADRRLMPTLVGSLALLAIVLAVFSLTVHAQFAA 291 >ref|NP_879170.1| transporter [Bordetella pertussis Tohama I] emb|CAE40669.1| probable transporter [Bordetella pertussis Tohama I] gb|AEE65734.1| transporter [Bordetella pertussis CS] Length = 400 Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust. Identities = 198/291 (68%), Positives = 231/291 (79%) Query: 1 MPIALWALAISAFAIGTTEFVIMGLLPEVAANLGTTLSSAGLLVTGYALGVFVGAPLVTA 60 MPIALWALA AF IGTTEFVIMGLLPEV A+LG ++ AGLLVTGYALGV VGAP V Sbjct: 1 MPIALWALAAGAFGIGTTEFVIMGLLPEVGADLGVSIPQAGLLVTGYALGVVVGAPPVAI 60 Query: 61 TTGKLPRKTLLVSLMVLFVIGNIGCAIAPDYTTLMISRIVASFSHGAFFGVGSVVATGLV 120 T +LPRKTLL+ LM++F +GN+ CA+AP Y LM +R++ S +HGAFFGVGSVVAT LV Sbjct: 61 LTARLPRKTLLLGLMLIFTLGNLACALAPGYGALMAARVLTSLAHGAFFGVGSVVATSLV 120 Query: 121 PKEKQASAIALMFTGLTVANVLGVPFGTWLGQMYGWRSTFWAVSAIGVVALLATAYLVPR 180 +KQASAIALMFTGLT+ANVLGVPFGTWLGQ +GWR+TFWAV+A+G+ A+ A Y VP Sbjct: 121 RPDKQASAIALMFTGLTLANVLGVPFGTWLGQAWGWRATFWAVTAVGIAAMAAIMYWVPA 180 Query: 181 SDDRQDADFRSELRVLGRPQVLLGLLMTVLGFGGVFAAFTYIAPILTDITGFQPGAVSPI 240 S + AD ELR L RPQVLLG MTVLGFGGVF FTYIAPILT ++G AVSPI Sbjct: 181 SRGQHQADLAGELRALARPQVLLGFAMTVLGFGGVFTTFTYIAPILTGVSGIAAAAVSPI 240 Query: 241 LLLFGVGLVGGNLLGGKFADKYLMPTLVISLVLLAGVLVLFSFTSHYKLAA 291 LLLFGVGLV GN LGG+ AD+ LMPTLV SL +LA VL F++T+H+ +AA Sbjct: 241 LLLFGVGLVAGNTLGGRLADRRLMPTLVGSLAVLAAVLAAFAWTAHHSIAA 291 >ref|NP_105039.1| transmembrane efflux protein [Mesorhizobium loti MAFF303099] dbj|BAB50825.1| transmembrane efflux protein [Mesorhizobium loti MAFF303099] Length = 397 Score = 360 bits (924), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 190/341 (55%), Positives = 248/341 (72%), Gaps = 9/341 (2%) Query: 1 MPIALWALAISAFAIGTTEFVIMGLLPEVAANLGTTLSSAGLLVTGYALGVFVGAPLVTA 60 MPIAL+ALA AF IG TEFVIMGLL +V+ +LG ++S+AG L++GYALGV +GAPL+T Sbjct: 1 MPIALYALAAGAFGIGVTEFVIMGLLIDVSKDLGVSISAAGQLISGYALGVVIGAPLLTI 60 Query: 61 TTGKLPRKTLLVSLMVLFVIGNIGCAIAPDYTTLMISRIVASFSHGAFFGVGSVVATGLV 120 TG PRKT+L++LM +F +GN+ CA+APDY LM +RI+ +F+HG FFGVGSVVATGLV Sbjct: 61 ATGNWPRKTVLLALMAIFTLGNLACALAPDYWALMGARIITAFAHGTFFGVGSVVATGLV 120 Query: 121 PKEKQASAIALMFTGLTVANVLGVPFGTWLGQMYGWRSTFWAVSAIGVVALLATAYLVPR 180 K+ASAIALMFTGLT+AN+LGVPFGTWLGQ +GWR+TFWAV+A+G+ A LVPR Sbjct: 121 APNKKASAIALMFTGLTIANILGVPFGTWLGQAFGWRATFWAVTAVGLAAFAVILALVPR 180 Query: 181 SD-DRQDADFRSELRVLGRPQVLLGLLMTVLGFGGVFAAFTYIAPILTDITGFQPGAVSP 239 S + +D R++L VL R VLLGL TVLG+ GVFA FTYIAP+LT+I+GF+ AVSP Sbjct: 181 SQVAPEKSDLRADLAVLRRTPVLLGLATTVLGYAGVFAVFTYIAPLLTEISGFKEAAVSP 240 Query: 240 ILLLFGVGLVGGNLLGGKFADKYLMPTLVISLVLLAGVLVLFSFTSHYKLAASRKAPTCG 299 ILL+FG GL+ GNL GGK AD++L+P ++ SLV+LA VL SF H ++ A Sbjct: 241 ILLVFGGGLIAGNLAGGKVADRWLVPAVLGSLVVLALVLATMSFAIHSQVLA-------- 292 Query: 300 TIQCSMNGAEASTRSLPTGFWLRMRIDSSARSMAATISRAC 340 I + GA A P W+ + + +S+A++ + A Sbjct: 293 VIYVGLLGAAAFATVAPLQMWVLDKAQGAGQSLASSFNIAA 333 >ref|YP_001856654.1| major facilitator transporter [Burkholderia phymatum STM815] gb|ACC69608.1| major facilitator superfamily MFS_1 [Burkholderia phymatum STM815] Length = 392 Score = 351 bits (901), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 183/292 (62%), Positives = 224/292 (76%) Query: 1 MPIALWALAISAFAIGTTEFVIMGLLPEVAANLGTTLSSAGLLVTGYALGVFVGAPLVTA 60 MPI L ALAISAFAIGTTEFVIMGLLPEVA +L +L SAGLLV+GYALGV VGAPL+ Sbjct: 1 MPIPLLALAISAFAIGTTEFVIMGLLPEVAKDLAVSLPSAGLLVSGYALGVAVGAPLLAV 60 Query: 61 TTGKLPRKTLLVSLMVLFVIGNIGCAIAPDYTTLMISRIVASFSHGAFFGVGSVVATGLV 120 T ++PRK L LM +F++GN+ CAIA DY+ LMI+R+V SF+HG+FFG+G+VVA LV Sbjct: 61 VTSRMPRKLALQLLMGVFIVGNLLCAIASDYSVLMIARVVTSFAHGSFFGIGAVVAASLV 120 Query: 121 PKEKQASAIALMFTGLTVANVLGVPFGTWLGQMYGWRSTFWAVSAIGVVALLATAYLVPR 180 P+EK+ASAIALMFTGLT+ANVLGVPFGT++GQ +GWR FW V+A GV++L LVP Sbjct: 121 PQEKRASAIALMFTGLTLANVLGVPFGTFIGQQFGWRVAFWIVAAFGVMSLAGVTALVPN 180 Query: 181 SDDRQDADFRSELRVLGRPQVLLGLLMTVLGFGGVFAAFTYIAPILTDITGFQPGAVSPI 240 D A E+RVL PQV L L MTVLGFGGVF FTYIAPIL + GF P V+ I Sbjct: 181 RHDTGPAGLGHEVRVLKEPQVWLALTMTVLGFGGVFVVFTYIAPILEQVGGFTPHGVTLI 240 Query: 241 LLLFGVGLVGGNLLGGKFADKYLMPTLVISLVLLAGVLVLFSFTSHYKLAAS 292 L+LFGVGL GN +GGK AD+ LMP+L+ L+ LA V+ +F+ TSH ++AA+ Sbjct: 241 LVLFGVGLTVGNTVGGKLADRSLMPSLMGILIALAVVMAVFAHTSHSQVAAA 292