BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0083.p (389 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776337.1| transmembrane efflux transmembrane protein [... 573 e-161 ref|YP_001633133.1| putative transmembrane efflux protein of the... 524 e-146 ref|NP_879170.1| transporter [Bordetella pertussis Tohama I] >gi... 496 e-138 ref|YP_004155462.1| major facilitator superfamily protein [Vario... 430 e-118 ref|ZP_02884556.1| major facilitator superfamily MFS_1 [Burkhold... 428 e-118 >ref|YP_003776337.1| transmembrane efflux transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ64429.1| transmembrane efflux transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 395 Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust. Identities = 311/394 (78%), Positives = 340/394 (86%), Gaps = 5/394 (1%) Query: 1 MPIALWALAISAFAIGTTEFVIMGLLPEVAANLGTTLSSAGLLVTGYALGVFVGAPLVTA 60 MPIALWAL ISAFAIGTTEFVIMGLLPEVAANLG +LSSAGLLVTGYALGVFVGAPL+TA Sbjct: 1 MPIALWALTISAFAIGTTEFVIMGLLPEVAANLGVSLSSAGLLVTGYALGVFVGAPLLTA 60 Query: 61 TTGKLPRKTLLVSLMVLFVIGNIGCAIAPDYTTLMISRIVASFSHGAFFGVGSVVATGLV 120 TTG+LPRKTLLV+LMV+FV+GN+ CAIAPDYTTLMI R+VASF+HGAFFGVGSVVAT LV Sbjct: 61 TTGRLPRKTLLVALMVVFVVGNLACAIAPDYTTLMIGRVVASFAHGAFFGVGSVVATSLV 120 Query: 121 PKEKQASAIALMFTGLTVANVLGVPFGTWLGQMYGWRSTFWAVSAIGVVALLATAYLVPR 180 PKEKQASAIALMFTGLTVANVLGVPFGTWLGQ YGWR+TFWAV+ IGV+AL ATA LVPR Sbjct: 121 PKEKQASAIALMFTGLTVANVLGVPFGTWLGQSYGWRATFWAVTVIGVIALAATAVLVPR 180 Query: 181 SDDRQDADFRSELRVLGRPQVLLGLLMTVLGFGGVFAAFTYIAPILTDITGFQPGAVSPI 240 S ++ DF E+RVL RPQV+LGLLMTVLGFGGVFAAFTYIAPILTD++GF AVSPI Sbjct: 181 SQGGEETDFGKEVRVLMRPQVMLGLLMTVLGFGGVFAAFTYIAPILTDLSGFPASAVSPI 240 Query: 241 LLLFGVGLVGGNLLGGKFADKYLMPTLVISLVLLAGVLVLFSFTSHYKL-----VGLLGA 295 LLLFG+GLV GNL GGK ADK LM TL+ SLVLLA VLVLF T K+ VGL+G Sbjct: 241 LLLFGLGLVIGNLAGGKLADKKLMATLLGSLVLLAAVLVLFGLTVDNKVAAIIGVGLMGM 300 Query: 296 AAFATVPPLQMRVLEKATGAPNLASSVNIAAFNLGNALGAWLGGVTIDHGPGLHAVSLVA 355 AAFATVPPLQMRVLEKATGAPNLASS NIAAFNLGNA GAWLGGVTIDHGPGLHAV VA Sbjct: 301 AAFATVPPLQMRVLEKATGAPNLASSANIAAFNLGNAAGAWLGGVTIDHGPGLHAVPYVA 360 Query: 356 ALITAGGLVVALISWKLDRKTAPAVSLKAANKAC 389 AL+ G+VVAL+SWK+D A A +++ A Sbjct: 361 ALLPLAGIVVALVSWKMDAGRATAQHGSSSDTAA 394 >ref|YP_001633133.1| putative transmembrane efflux protein of the MFS type [Bordetella petrii DSM 12804] emb|CAP44866.1| putative Transmembrane efflux protein of the MFS type [Bordetella petrii] Length = 387 Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust. Identities = 275/380 (72%), Positives = 309/380 (81%), Gaps = 5/380 (1%) Query: 1 MPIALWALAISAFAIGTTEFVIMGLLPEVAANLGTTLSSAGLLVTGYALGVFVGAPLVTA 60 MPIALWALA+ AF IGTTEFVIMGLLPEV A+LG +LSSAGLLVTGYALGV VGAP V Sbjct: 1 MPIALWALAVGAFGIGTTEFVIMGLLPEVGADLGVSLSSAGLLVTGYALGVVVGAPPVAI 60 Query: 61 TTGKLPRKTLLVSLMVLFVIGNIGCAIAPDYTTLMISRIVASFSHGAFFGVGSVVATGLV 120 T ++PRKTLL++LMV+F +GN+ CA+AP Y TLM +R++ S +HGAFFGVGSVVAT LV Sbjct: 61 LTTRMPRKTLLLALMVIFTLGNLACALAPGYGTLMAARVLTSLAHGAFFGVGSVVATSLV 120 Query: 121 PKEKQASAIALMFTGLTVANVLGVPFGTWLGQMYGWRSTFWAVSAIGVVALLATAYLVPR 180 EKQASAIALMFTGLT+ANVLGVPFGTWLGQ +GWR+TFWAV+ +G+VA+LA A VPR Sbjct: 121 KPEKQASAIALMFTGLTLANVLGVPFGTWLGQAWGWRATFWAVTVVGIVAMLAIATWVPR 180 Query: 181 SDDRQDADFRSELRVLGRPQVLLGLLMTVLGFGGVFAAFTYIAPILTDITGFQPGAVSPI 240 S + D ELR L RPQVLLG MTVLGFGGVF AFTYIAP+LT++ GF PGAVSPI Sbjct: 181 SRGDRGGDLMGELRALSRPQVLLGFAMTVLGFGGVFTAFTYIAPLLTELAGFSPGAVSPI 240 Query: 241 LLLFGVGLVGGNLLGGKFADKYLMPTLVISLVLLAGVLVLFSFTSHYKL-----VGLLGA 295 LLLFGVGLV GN GGK AD+ LMPTLV SL LLA VL +FS T H + V +LGA Sbjct: 241 LLLFGVGLVAGNTYGGKLADRRLMPTLVGSLALLAIVLAVFSLTVHAQFAAVATVAVLGA 300 Query: 296 AAFATVPPLQMRVLEKATGAPNLASSVNIAAFNLGNALGAWLGGVTIDHGPGLHAVSLVA 355 AAFATVPPLQMRVLEKA APNLAS+ NIAAFNLGNA GAWLGG+TIDHGPGL A LVA Sbjct: 301 AAFATVPPLQMRVLEKAGDAPNLASAFNIAAFNLGNAAGAWLGGLTIDHGPGLAATPLVA 360 Query: 356 ALITAGGLVVALISWKLDRK 375 A +TA GL VAL SWKLD + Sbjct: 361 AAVTASGLAVALYSWKLDMR 380 >ref|NP_879170.1| transporter [Bordetella pertussis Tohama I] emb|CAE40669.1| probable transporter [Bordetella pertussis Tohama I] gb|AEE65734.1| transporter [Bordetella pertussis CS] Length = 400 Score = 496 bits (1276), Expect = e-138, Method: Compositional matrix adjust. Identities = 266/397 (67%), Positives = 310/397 (78%), Gaps = 10/397 (2%) Query: 1 MPIALWALAISAFAIGTTEFVIMGLLPEVAANLGTTLSSAGLLVTGYALGVFVGAPLVTA 60 MPIALWALA AF IGTTEFVIMGLLPEV A+LG ++ AGLLVTGYALGV VGAP V Sbjct: 1 MPIALWALAAGAFGIGTTEFVIMGLLPEVGADLGVSIPQAGLLVTGYALGVVVGAPPVAI 60 Query: 61 TTGKLPRKTLLVSLMVLFVIGNIGCAIAPDYTTLMISRIVASFSHGAFFGVGSVVATGLV 120 T +LPRKTLL+ LM++F +GN+ CA+AP Y LM +R++ S +HGAFFGVGSVVAT LV Sbjct: 61 LTARLPRKTLLLGLMLIFTLGNLACALAPGYGALMAARVLTSLAHGAFFGVGSVVATSLV 120 Query: 121 PKEKQASAIALMFTGLTVANVLGVPFGTWLGQMYGWRSTFWAVSAIGVVALLATAYLVPR 180 +KQASAIALMFTGLT+ANVLGVPFGTWLGQ +GWR+TFWAV+A+G+ A+ A Y VP Sbjct: 121 RPDKQASAIALMFTGLTLANVLGVPFGTWLGQAWGWRATFWAVTAVGIAAMAAIMYWVPA 180 Query: 181 SDDRQDADFRSELRVLGRPQVLLGLLMTVLGFGGVFAAFTYIAPILTDITGFQPGAVSPI 240 S + AD ELR L RPQVLLG MTVLGFGGVF FTYIAPILT ++G AVSPI Sbjct: 181 SRGQHQADLAGELRALARPQVLLGFAMTVLGFGGVFTTFTYIAPILTGVSGIAAAAVSPI 240 Query: 241 LLLFGVGLVGGNLLGGKFADKYLMPTLVISLVLLAGVLVLFSFTSHYKL-----VGLLGA 295 LLLFGVGLV GN LGG+ AD+ LMPTLV SL +LA VL F++T+H+ + V LLGA Sbjct: 241 LLLFGVGLVAGNTLGGRLADRRLMPTLVGSLAVLAAVLAAFAWTAHHSIAAVATVALLGA 300 Query: 296 AAFATVPPLQMRVLEKATGAPNLASSVNIAAFNLGNALGAWLGGVTIDHGPGLHAVSLVA 355 AAFATVPPLQMRVL++A GAPNLAS+ NIAAFNLGNA GAWLGG+TIDHGPGL A LVA Sbjct: 301 AAFATVPPLQMRVLQQAGGAPNLASAFNIAAFNLGNAAGAWLGGLTIDHGPGLAATPLVA 360 Query: 356 ALITAGGLVVALISWKLDRKT-----APAVSLKAANK 387 A +T GGL +AL+SW DR+ APA++ +A Sbjct: 361 AAVTGGGLALALLSWSRDRRNDANQRAPALAARACES 397 >ref|YP_004155462.1| major facilitator superfamily protein [Variovorax paradoxus EPS] gb|ADU37351.1| major facilitator superfamily MFS_1 [Variovorax paradoxus EPS] Length = 396 Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust. Identities = 237/384 (61%), Positives = 286/384 (74%), Gaps = 7/384 (1%) Query: 1 MPIALWALAISAFAIGTTEFVIMGLLPEVAANLGTTLSSAGLLVTGYALGVFVGAPLVTA 60 MPIAL AL AF IGTTEFVIMGLL +V+ +L +++ AGLL++GYALGV VGAP++T Sbjct: 1 MPIALLALTAGAFGIGTTEFVIMGLLMQVSTDLHVSITMAGLLISGYALGVAVGAPVLTI 60 Query: 61 TTGKLPRKTLLVSLMVLFVIGNIGCAIAPDYTTLMISRIVASFSHGAFFGVGSVVATGLV 120 T KLPRKT+L++LM +F +GN+ CA+AP+Y LM +R+V S +HG FFGVGSVVATGLV Sbjct: 61 ATRKLPRKTVLLALMAIFTLGNLACALAPNYEMLMTARVVTSLAHGTFFGVGSVVATGLV 120 Query: 121 PKEKQASAIALMFTGLTVANVLGVPFGTWLGQMYGWRSTFWAVSAIGVVALLATAYLVPR 180 E++ASAIA+MFTGLT A +LGVP G WLG +GWRS FWAV+ IGV+A A VPR Sbjct: 121 APERRASAIAIMFTGLTAATLLGVPAGAWLGLQFGWRSAFWAVTLIGVLAFTVLAVFVPR 180 Query: 181 -SDDRQDADFRSELRVLGRPQVLLGLLMTVLGFGGVFAAFTYIAPILTDITGFQPGAVSP 239 + + A R EL VL RPQVLLGL MTVLGF GVF FTYI P+LT ITG AVSP Sbjct: 181 VKGEAKPAPLREELAVLARPQVLLGLAMTVLGFAGVFVVFTYIQPLLTQITGLSESAVSP 240 Query: 240 ILLLFGVGLVGGNLLGGKFADKYLMPTLVISLVLLAGVLVLFSFT-----SHYKLVGLLG 294 ILL+FG GL GN+LGGK AD+ M ++ +LV LA VL FT + VGLLG Sbjct: 241 ILLVFGGGLAVGNILGGKLADRAPMAAVLGTLVALAVVLGAMQFTIGTPFTAVVFVGLLG 300 Query: 295 AAAFATVPPLQMRVLEKATGA-PNLASSVNIAAFNLGNALGAWLGGVTIDHGPGLHAVSL 353 A+FATV P+Q+RVLEKA+GA NLASS+NIAAFNLGNALGAW+GGV IDHGPGL A+ Sbjct: 301 VASFATVAPMQLRVLEKASGAGQNLASSLNIAAFNLGNALGAWVGGVVIDHGPGLRALGW 360 Query: 354 VAALITAGGLVVALISWKLDRKTA 377 VAAL+T GL +AL S LDR+ + Sbjct: 361 VAALLTLVGLAIALWSRALDRQES 384 >ref|ZP_02884556.1| major facilitator superfamily MFS_1 [Burkholderia graminis C4D1M] gb|EDT09721.1| major facilitator superfamily MFS_1 [Burkholderia graminis C4D1M] Length = 395 Score = 428 bits (1101), Expect = e-118, Method: Compositional matrix adjust. Identities = 233/384 (60%), Positives = 281/384 (73%), Gaps = 8/384 (2%) Query: 1 MPIALWALAISAFAIGTTEFVIMGLLPEVAANLGTTLSSAGLLVTGYALGVFVGAPLVTA 60 MPI L ALAISAFAIGTTEFVIMGLLPEVA +L ++ SAGLLV+GYALGV VGAPL+ Sbjct: 1 MPIPLLALAISAFAIGTTEFVIMGLLPEVARDLAVSIPSAGLLVSGYALGVAVGAPLLAV 60 Query: 61 TTGKLPRKTLLVSLMVLFVIGNIGCAIAPDYTTLMISRIVASFSHGAFFGVGSVVATGLV 120 T ++PRK L LM +F++GN CAIA Y+ LMI+R+V SF+HG+FFG+G+VVA LV Sbjct: 61 VTSRMPRKLALQLLMGVFIVGNTLCAIASSYSVLMIARVVTSFAHGSFFGIGAVVAASLV 120 Query: 121 PKEKQASAIALMFTGLTVANVLGVPFGTWLGQMYGWRSTFWAVSAIGVVALLATAYLVPR 180 P EK+ASAIALMFTGLT+ANVLGVPFGT++GQ +GWR FW VSA GV++L LVP Sbjct: 121 PSEKRASAIALMFTGLTLANVLGVPFGTFVGQEFGWRVAFWIVSAFGVLSLAGVTALVPN 180 Query: 181 SDDRQDADFRSELRVLGRPQVLLGLLMTVLGFGGVFAAFTYIAPILTDITGFQPGAVSPI 240 D A E+RVL PQV L MTVLGFGGVF FTYIAPIL ++GF P AV+ I Sbjct: 181 RHDSAPAGLGHEVRVLKDPQVWTALAMTVLGFGGVFVVFTYIAPILEQVSGFSPRAVTLI 240 Query: 241 LLLFGVGLVGGNLLGGKFADKYLMPTLVISLVLLAGVLVLFSFTSHYKL-----VGLLGA 295 L+LFGVGL GN +GGK AD+ LMP+L+ L LA V+ LF+ TSH ++ V + G Sbjct: 241 LVLFGVGLTIGNTVGGKLADRALMPSLMAILAALAVVMALFARTSHSQVAAAVTVFVWGI 300 Query: 296 AAFATVPPLQMRVLEKATGAPNLASSVNIAAFNLGNALGAWLGGVTIDHGPGLHAVSLVA 355 AAFATVPPLQMRV+EKA APNLAS++NI AFN+GNA GAWLGG+ IDHG L + VA Sbjct: 301 AAFATVPPLQMRVVEKAAKAPNLASTLNIGAFNVGNAGGAWLGGLVIDHGHSLDTLPWVA 360 Query: 356 ALITAGGLVVALISWKLDRKTAPA 379 A ++ L L++W R PA Sbjct: 361 AAVSLSAL---LLTWFASRMDTPA 381