BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0077.p (294 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776341.1| HflC protein [Herbaspirillum seropedicae SmR... 532 e-149 ref|YP_001353809.1| inner membrane-anchored protein [Janthinobac... 503 e-140 ref|YP_001099574.1| HflKC membrane-associated complex associates... 493 e-137 ref|ZP_08274391.1| HflC protein [Oxalobacteraceae bacterium IMCC... 487 e-136 ref|YP_004752578.1| HflC protein [Collimonas fungivorans Ter331]... 483 e-134 >ref|YP_003776341.1| HflC protein [Herbaspirillum seropedicae SmR1] gb|ADJ64433.1| HflC protein [Herbaspirillum seropedicae SmR1] Length = 297 Score = 532 bits (1370), Expect = e-149, Method: Compositional matrix adjust. Identities = 251/292 (85%), Positives = 277/292 (94%) Query: 1 MSRLITSIIAAVIAIWLVSTTIFVVEQRQSAIVFALGEVKQVVTEPGLHFKLPPPFQNVI 60 M RL+TS+I AV+AIWL S+TIFVV+QR SAIVFALGEVKQV+TEPGLHFKLPPPFQNV+ Sbjct: 1 MGRLVTSVIVAVVAIWLASSTIFVVDQRSSAIVFALGEVKQVITEPGLHFKLPPPFQNVM 60 Query: 61 YIDKRIQTLDTPDADRFITAEKKNVLVDSFVKWRIVDPRLYFISFGGDERRAQDRLSQIV 120 Y+DKRIQTLDTPDADRFITAEK NVLVD++VKWRIVDPRLYF+SFG DERR QDRLSQIV Sbjct: 61 YLDKRIQTLDTPDADRFITAEKMNVLVDAYVKWRIVDPRLYFVSFGADERRTQDRLSQIV 120 Query: 121 KAALNEEITKRTVREVISGERGKVMDAIQRKVATEAKQIGAEIIDVRLRRVDYVDQINNS 180 KAALN+EITKRTVREVIS +R VMDAIQ +VA EAKQIG E+IDVRLRRVDYVDQINNS Sbjct: 121 KAALNDEITKRTVREVISSQRNNVMDAIQARVANEAKQIGVEVIDVRLRRVDYVDQINNS 180 Query: 181 VYDRMKSERARVANELRSTGAAESEKIRADADRQRVVLLAEAYRDAEKIRGAGDAKASQV 240 V++RMKSER RVANELRSTGAAESEKIRADADRQRVV+LAEAYR++EKIRGAGD+KASQ+ Sbjct: 181 VFERMKSERVRVANELRSTGAAESEKIRADADRQRVVILAEAYRESEKIRGAGDSKASQI 240 Query: 241 YAQAFGQNPEFFKFYRSLEAYRASFKNRHDLMVVDPNSEFFKYFKGVGSASA 292 YAQAFGQNPEFFKFYRSLEAYRASFKNRHD+MVVDP+SEFFKYFKG+G+ SA Sbjct: 241 YAQAFGQNPEFFKFYRSLEAYRASFKNRHDVMVVDPSSEFFKYFKGIGAGSA 292 >ref|YP_001353809.1| inner membrane-anchored protein [Janthinobacterium sp. Marseille] gb|ABR89010.1| inner membrane-anchored protein [Janthinobacterium sp. Marseille] Length = 296 Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust. Identities = 238/292 (81%), Positives = 271/292 (92%) Query: 1 MSRLITSIIAAVIAIWLVSTTIFVVEQRQSAIVFALGEVKQVVTEPGLHFKLPPPFQNVI 60 M+RLI+ +I AVIA +S+T+FVV+QRQ AIVFALGEVK V++EPGLHFKLPPPFQNV+ Sbjct: 1 MNRLISYVIVAVIAFIALSSTLFVVDQRQYAIVFALGEVKTVISEPGLHFKLPPPFQNVV 60 Query: 61 YIDKRIQTLDTPDADRFITAEKKNVLVDSFVKWRIVDPRLYFISFGGDERRAQDRLSQIV 120 ++DKRI TLDTPDADRFITAEKKN+LVD+FVKWRIVDPRLYF+SF GDER AQ+R++QIV Sbjct: 61 FLDKRILTLDTPDADRFITAEKKNILVDAFVKWRIVDPRLYFVSFSGDERSAQNRMAQIV 120 Query: 121 KAALNEEITKRTVREVISGERGKVMDAIQRKVATEAKQIGAEIIDVRLRRVDYVDQINNS 180 KA+LNEEITKRTVREVISGERGKVMD IQ+KV EAKQIG EI+DVRL+RVDYV+QINNS Sbjct: 121 KASLNEEITKRTVREVISGERGKVMDGIQKKVTEEAKQIGVEIVDVRLKRVDYVEQINNS 180 Query: 181 VYDRMKSERARVANELRSTGAAESEKIRADADRQRVVLLAEAYRDAEKIRGAGDAKASQV 240 V+DRMKSERARVANELRSTGAAESEKIRADADRQR V+LAEAYRDAE+IRG GDAKASQ+ Sbjct: 181 VFDRMKSERARVANELRSTGAAESEKIRADADRQRTVILAEAYRDAEQIRGEGDAKASQI 240 Query: 241 YAQAFGQNPEFFKFYRSLEAYRASFKNRHDLMVVDPNSEFFKYFKGVGSASA 292 YAQAFGQ+PEF+KFYRSLEAYRASFK R+D++V+DPNSEFFKYFK GS A Sbjct: 241 YAQAFGQSPEFYKFYRSLEAYRASFKTRNDMLVIDPNSEFFKYFKNPGSTGA 292 >ref|YP_001099574.1| HflKC membrane-associated complex associates with HflK, part of modulator for protease specific for FtsH phage lambda cII repressor [Herminiimonas arsenicoxydans] emb|CAL61447.1| Protein HflC [Herminiimonas arsenicoxydans] Length = 296 Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust. Identities = 237/296 (80%), Positives = 268/296 (90%), Gaps = 2/296 (0%) Query: 1 MSRLITSIIAAVIAIWLVSTTIFVVEQRQSAIVFALGEVKQVVTEPGLHFKLPPPFQNVI 60 M+RLI+ +IA IA + +T+FVV+QRQ AIVFALGEVK V+ EPGLHFKLPPPFQNV+ Sbjct: 1 MNRLISYVIALAIAAGIFFSTMFVVDQRQYAIVFALGEVKTVINEPGLHFKLPPPFQNVV 60 Query: 61 YIDKRIQTLDTPDADRFITAEKKNVLVDSFVKWRIVDPRLYFISFGGDERRAQDRLSQIV 120 ++DKRI TLDTPDADRFITAEKKN+LVD+FVKWRIVDPRLYF+SF GDER AQ+R++QIV Sbjct: 61 FLDKRILTLDTPDADRFITAEKKNILVDAFVKWRIVDPRLYFVSFSGDERSAQNRMAQIV 120 Query: 121 KAALNEEITKRTVREVISGERGKVMDAIQRKVATEAKQIGAEIIDVRLRRVDYVDQINNS 180 KAALN+EITKRTVREVISGER KVMD IQ+KV EAKQIG EI+DVRL+RVDYV+QIN S Sbjct: 121 KAALNDEITKRTVREVISGERSKVMDGIQKKVTEEAKQIGVEIVDVRLKRVDYVEQINAS 180 Query: 181 VYDRMKSERARVANELRSTGAAESEKIRADADRQRVVLLAEAYRDAEKIRGAGDAKASQV 240 V+DRMKSERARVANELRSTGAAESEKIRADADRQR V+LAEAYRDAE+IRG GDAKASQV Sbjct: 181 VFDRMKSERARVANELRSTGAAESEKIRADADRQRTVILAEAYRDAEQIRGEGDAKASQV 240 Query: 241 YAQAFGQNPEFFKFYRSLEAYRASFKNRHDLMVVDPNSEFFKYFKG--VGSASAKK 294 YAQAFGQNPEF+KFYRSLEAYR SFK R+D++V+DPNSEFFKYFK GS +AKK Sbjct: 241 YAQAFGQNPEFYKFYRSLEAYRGSFKTRNDMLVIDPNSEFFKYFKNPTTGSGAAKK 296 >ref|ZP_08274391.1| HflC protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF32141.1| HflC protein [Oxalobacteraceae bacterium IMCC9480] Length = 296 Score = 487 bits (1254), Expect = e-136, Method: Compositional matrix adjust. Identities = 227/292 (77%), Positives = 272/292 (93%) Query: 1 MSRLITSIIAAVIAIWLVSTTIFVVEQRQSAIVFALGEVKQVVTEPGLHFKLPPPFQNVI 60 M+R++++++ A+IA++L++++IFVV QRQ AIVFALGEVKQV++EPGLHFK+P PFQNV+ Sbjct: 1 MNRIVSAVVLALIALYLLTSSIFVVNQRQYAIVFALGEVKQVISEPGLHFKMPQPFQNVL 60 Query: 61 YIDKRIQTLDTPDADRFITAEKKNVLVDSFVKWRIVDPRLYFISFGGDERRAQDRLSQIV 120 ++DKRI TLDTPDADRFITAEKKN+LVD+FVKWRI+ P LYF+SFGGDERRA DR++QIV Sbjct: 61 FLDKRILTLDTPDADRFITAEKKNILVDAFVKWRIIGPTLYFVSFGGDERRALDRMAQIV 120 Query: 121 KAALNEEITKRTVREVISGERGKVMDAIQRKVATEAKQIGAEIIDVRLRRVDYVDQINNS 180 KAALNEEITKRTVREVISGERG VMDAIQ+KVA EAK+IG EI+DVRL+RVDYV+QIN S Sbjct: 121 KAALNEEITKRTVREVISGERGSVMDAIQKKVADEAKEIGVEIVDVRLKRVDYVEQINLS 180 Query: 181 VYDRMKSERARVANELRSTGAAESEKIRADADRQRVVLLAEAYRDAEKIRGAGDAKASQV 240 VY+RMK+ER RVANELRSTGAAESEKIRADADRQR VLLA+AYRDAE +RG GDAKASQ+ Sbjct: 181 VYERMKAERTRVANELRSTGAAESEKIRADADRQRTVLLADAYRDAEMLRGEGDAKASQI 240 Query: 241 YAQAFGQNPEFFKFYRSLEAYRASFKNRHDLMVVDPNSEFFKYFKGVGSASA 292 YA+AFG++PEF+KFYRSLEAYR+SFK+R DLMVVDP+SEFFKYFK G+ +A Sbjct: 241 YAEAFGKSPEFYKFYRSLEAYRSSFKSRSDLMVVDPSSEFFKYFKAPGATAA 292 >ref|YP_004752578.1| HflC protein [Collimonas fungivorans Ter331] gb|AEK61755.1| HflC protein [Collimonas fungivorans Ter331] Length = 298 Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust. Identities = 225/286 (78%), Positives = 262/286 (91%) Query: 1 MSRLITSIIAAVIAIWLVSTTIFVVEQRQSAIVFALGEVKQVVTEPGLHFKLPPPFQNVI 60 M+RLI+ +I A+WL+ +TIFVV+QRQ AI+FA GEVKQV+ +PGLHFKLPPPFQNV+ Sbjct: 1 MNRLISLLIFVFAALWLLFSTIFVVDQRQYAILFAFGEVKQVINQPGLHFKLPPPFQNVL 60 Query: 61 YIDKRIQTLDTPDADRFITAEKKNVLVDSFVKWRIVDPRLYFISFGGDERRAQDRLSQIV 120 ++DKRI T+D PD DRFITAEK N+L+D+FVKWRI DP+LYF+SFGGDE+RAQDR+SQIV Sbjct: 61 FLDKRILTIDPPDTDRFITAEKMNILIDAFVKWRITDPKLYFVSFGGDEKRAQDRMSQIV 120 Query: 121 KAALNEEITKRTVREVISGERGKVMDAIQRKVATEAKQIGAEIIDVRLRRVDYVDQINNS 180 KAALN+EITKRTVREVISG+RGKVMD+I+ KVA E+KQIG +IIDVRL+RVDYVDQIN S Sbjct: 121 KAALNDEITKRTVREVISGQRGKVMDSIRSKVAEESKQIGVDIIDVRLKRVDYVDQINAS 180 Query: 181 VYDRMKSERARVANELRSTGAAESEKIRADADRQRVVLLAEAYRDAEKIRGAGDAKASQV 240 VYDRMKSER RVANELRSTG+A+SEKIRADAD+QR V+LAEAYRDAEK+RG GDAKASQ+ Sbjct: 181 VYDRMKSERLRVANELRSTGSADSEKIRADADKQRTVILAEAYRDAEKMRGEGDAKASQI 240 Query: 241 YAQAFGQNPEFFKFYRSLEAYRASFKNRHDLMVVDPNSEFFKYFKG 286 YAQAFGQNPEF+KFYRSLEAYRASFK R DLMV+DPNSEFFKYF+ Sbjct: 241 YAQAFGQNPEFYKFYRSLEAYRASFKTRQDLMVIDPNSEFFKYFRS 286