BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0076.p (439 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776342.1| transmembrane protease [Herbaspirillum serop... 660 0.0 ref|YP_001099573.1| HflKC membrane-associated complex associates... 633 e-179 ref|YP_004752577.1| HflK protein [Collimonas fungivorans Ter331]... 619 e-175 ref|YP_001353810.1| membrane protease subunit HflK [Janthinobact... 572 e-161 ref|ZP_04578196.1| membrane protease subunit HflK [Oxalobacter f... 504 e-141 >ref|YP_003776342.1| transmembrane protease [Herbaspirillum seropedicae SmR1] gb|ADJ64434.1| transmembrane protease protein [Herbaspirillum seropedicae SmR1] Length = 450 Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust. Identities = 357/450 (79%), Positives = 388/450 (86%), Gaps = 11/450 (2%) Query: 1 MLVSLFKKLGIKFSLNDPQWGRGSQDDNNRQNQNNGNNGKKPD------DGPPDLDQLWR 54 MLVSLF+K+G+KFSLNDPQWGRGSQ+DN N N K+P+ DGPPDLDQLWR Sbjct: 1 MLVSLFRKIGVKFSLNDPQWGRGSQNDNRDNQNNGNNGDKRPEKPSGNNDGPPDLDQLWR 60 Query: 55 DFNQRLSRLFGKRGGGGSDNGDGGGFNRGD-IKGAGIGAGVIAVIVAFLWLASGFFIVQE 113 DFNQRLS LFG++GGGGS +G GG +KGAGIG GVIAVIVAFLWLASGFFIVQE Sbjct: 61 DFNQRLSGLFGRKGGGGSSDGGNGGGFNRGDVKGAGIGVGVIAVIVAFLWLASGFFIVQE 120 Query: 114 GQTAVVMTFGKYSHTTLPGFNWRWPYPLQSHEIVNVSQVRTAEIGYRSNAKNKQLKEALM 173 GQTAVV TFG+YSHTTLPGFNWRWPYP+Q HEIVN+SQVRTAEIGYR N +NKQLKE+LM Sbjct: 121 GQTAVVTTFGRYSHTTLPGFNWRWPYPIQGHEIVNMSQVRTAEIGYRGNVRNKQLKESLM 180 Query: 174 LTDDENIIDIQFAVQYKLKNAAEWLFNNRDQDETVRQVAETAIREIVGRSKMDFVLYEGR 233 LTDDENIIDIQFAVQYKLKNAAEWLFNNRD D++VRQVAETAIREIVGRSKMDFVLYEGR Sbjct: 181 LTDDENIIDIQFAVQYKLKNAAEWLFNNRDPDDSVRQVAETAIREIVGRSKMDFVLYEGR 240 Query: 234 EKVALDVGQLMQQILDRYKSGVQITNVTMQGVQPPEQVQAAFDDAVKAGQDRERQKNEGQ 293 EKVALDV Q MQQILDRYKSGVQITNVTMQGVQPPEQVQAAFDDAVKAGQDRER KNEGQ Sbjct: 241 EKVALDVSQRMQQILDRYKSGVQITNVTMQGVQPPEQVQAAFDDAVKAGQDRERLKNEGQ 300 Query: 294 AYANDVIPKASGAASRLLEEAEAYRSRIVANAEGDAARFKQVLEEYQKAPAVTRDRMYLE 353 AYANDVIP+ASGAASRLLEEAEAYRSR+VANAEGDA+RF QV E Y KAPAVTRDRMY+E Sbjct: 301 AYANDVIPRASGAASRLLEEAEAYRSRVVANAEGDASRFTQVQEAYAKAPAVTRDRMYIE 360 Query: 354 TMQQIFSNTTKVMVDAKSGNNLLYLPLDKLIQQS----DNAAAAAKPATAPAGSSTASPT 409 TMQQIF+NTTKVMVDAKSG+NLLYLPLDKLIQQ+ A A A APA S+ + Sbjct: 361 TMQQIFANTTKVMVDAKSGSNLLYLPLDKLIQQTGPEAAAAGKPAASAAAPAASAANPAS 420 Query: 410 LPGTDPVYSTDVQRDSRNRDARDSRDREVR 439 G D VYS+++ RD RNRD R+SR+REVR Sbjct: 421 NAGNDTVYSSELMRDMRNRDPRESREREVR 450 >ref|YP_001099573.1| HflKC membrane-associated complex associates with HflC, part of modulator for protease specific for FtsH phage lambda cII repressor [Herminiimonas arsenicoxydans] emb|CAL61446.1| protein HflK [Herminiimonas arsenicoxydans] Length = 431 Score = 633 bits (1633), Expect = e-179, Method: Compositional matrix adjust. Identities = 323/443 (72%), Positives = 367/443 (82%), Gaps = 16/443 (3%) Query: 1 MLVSLFKKLGIKFSLNDPQWGRGSQDDNNRQNQNNGNNGKKPDDGPPDLDQLWRDFNQRL 60 MLVSL KK G+KFSLNDP+WGRGS D+ N+ +GK+P+DGPPDLDQLWRDFNQRL Sbjct: 1 MLVSLLKKFGLKFSLNDPRWGRGSDDNKNQ-------DGKRPNDGPPDLDQLWRDFNQRL 53 Query: 61 SRLFGKRGGGGSDNGDGGGFN----RGDIKGAGIGAGVIAVIVAFLWLASGFFIVQEGQT 116 LFG R GG + G+GG + D++GAGIGAGVIAVIVAFLWL SGFFIVQEGQT Sbjct: 54 GNLFGNRKNGGGNGGNGGNTGGTGFKPDMRGAGIGAGVIAVIVAFLWLVSGFFIVQEGQT 113 Query: 117 AVVMTFGKYSHTTLPGFNWRWPYPLQSHEIVNVSQVRTAEIGYRSNAKNKQLKEALMLTD 176 VV+TFGKYSH T GFNWRWP P+QSHE VNVSQVRT E+GYR + KNKQ +E+LMLT+ Sbjct: 114 GVVLTFGKYSHMTPAGFNWRWPAPIQSHETVNVSQVRTVEVGYRGSVKNKQHQESLMLTE 173 Query: 177 DENIIDIQFAVQYKLKNAAEWLFNNRDQDETVRQVAETAIREIVGRSKMDFVLYEGREKV 236 DENIIDIQFAVQY LKNA++W+FNNR+Q E V+QVAETAIRE+VGRSKMDFVLYEGREK+ Sbjct: 174 DENIIDIQFAVQYTLKNASDWVFNNREQGEMVKQVAETAIREVVGRSKMDFVLYEGREKI 233 Query: 237 ALDVGQLMQQILDRYKSGVQITNVTMQGVQPPEQVQAAFDDAVKAGQDRERQKNEGQAYA 296 A D QLMQQI+DRYK+GVQITNVTMQGVQPPEQVQA+FDDAVKAGQDRERQKNEGQAYA Sbjct: 234 AFDTSQLMQQIVDRYKAGVQITNVTMQGVQPPEQVQASFDDAVKAGQDRERQKNEGQAYA 293 Query: 297 NDVIPKASGAASRLLEEAEAYRSRIVANAEGDAARFKQVLEEYQKAPAVTRDRMYLETMQ 356 NDVIP+A GAASRL+EE+EAYRS + ANA+G+A+RFKQVL EYQKAPAVTRDRMYLETMQ Sbjct: 294 NDVIPRARGAASRLMEESEAYRSSVTANAQGEASRFKQVLVEYQKAPAVTRDRMYLETMQ 353 Query: 357 QIFSNTTKVMVDAKSGNNLLYLPLDKLIQQSDNAAAAAKPATAPAGSSTASPTLPGTDPV 416 +IFS+TTKVMVDAK GNNL+YLPLDKLI Q+ A AA +A SS LP Sbjct: 354 KIFSSTTKVMVDAKGGNNLIYLPLDKLIAQTAAPAGAAVAPSAATPSS-----LPSDSVA 408 Query: 417 YSTDVQRDSRNRDARDSRDREVR 439 T + +DSR RD+R SRDRE R Sbjct: 409 LETQLPQDSRTRDSRTSRDRESR 431 >ref|YP_004752577.1| HflK protein [Collimonas fungivorans Ter331] gb|AEK61754.1| HflK protein [Collimonas fungivorans Ter331] Length = 442 Score = 619 bits (1597), Expect = e-175, Method: Compositional matrix adjust. Identities = 316/397 (79%), Positives = 348/397 (87%), Gaps = 11/397 (2%) Query: 1 MLVSLFKKLGIKFSLNDPQWGRGSQDDNNRQNQNNGNNGKKPDDG-PPDLDQLWRDFNQR 59 ML +LFKKLG+KFSLNDPQWGR SQ+DN +QN N+GKKP++G PPDLD+LW+DFNQR Sbjct: 11 MLGTLFKKLGVKFSLNDPQWGRNSQNDN-KQN----NDGKKPNNGGPPDLDKLWQDFNQR 65 Query: 60 LSRLFGKRGGGGSDNGDGGGFNRGDIKGAGIGAGVIAVIVAFLWLASGFFIVQEGQTAVV 119 L+RL GG + GGGFN G G GIG G IA +VA LWLASGFF VQEGQT VV Sbjct: 66 LARL-LGNKNGGGGDSSGGGFNPGS-AGMGIGVGAIAAVVALLWLASGFFTVQEGQTGVV 123 Query: 120 MTFGKYSHTTLPGFNWRWPYPLQSHEIVNVSQVRTAEIGYRSNAKNKQLKEALMLTDDEN 179 MTFGKYSH+T PGFNWRWPYP+QSHEIVNVSQVRT E+GYR+NAKNKQ KEALMLTDDEN Sbjct: 124 MTFGKYSHSTTPGFNWRWPYPIQSHEIVNVSQVRTVEVGYRANAKNKQPKEALMLTDDEN 183 Query: 180 IIDIQFAVQYKLKNAAEWLFNNRDQDETVRQVAETAIREIVGRSKMDFVLYEGREKVALD 239 IIDIQFAVQY LK+A++W+FN RD +ETVRQVAET+IRE+VGR+KMDFVLYEGREKVALD Sbjct: 184 IIDIQFAVQYTLKSASDWVFNVRDPEETVRQVAETSIREVVGRNKMDFVLYEGREKVALD 243 Query: 240 VGQLMQQILDRYKSGVQITNVTMQGVQPPEQVQAAFDDAVKAGQDRERQKNEGQAYANDV 299 QLMQQILDRYK GVQITNVTMQGVQPPEQVQAAFDDAVKAGQDRERQKNEGQAYANDV Sbjct: 244 TSQLMQQILDRYKVGVQITNVTMQGVQPPEQVQAAFDDAVKAGQDRERQKNEGQAYANDV 303 Query: 300 IPKASGAASRLLEEAEAYRSRIVANAEGDAARFKQVLEEYQKAPAVTRDRMYLETMQQIF 359 IPKA GAASRLL+EAEAY +R+ ANAEGDA+RFKQVL EYQKAP VTRDRMYL+TMQQIF Sbjct: 304 IPKARGAASRLLQEAEAYSARVTANAEGDASRFKQVLTEYQKAPGVTRDRMYLDTMQQIF 363 Query: 360 SNTTKVMVDAKSGNNLLYLPLDKLIQQSDNAAAAAKP 396 +NTTKVMVDAKSG+NLLYLPLDKLI QS A+A P Sbjct: 364 ANTTKVMVDAKSGSNLLYLPLDKLISQS---VASAVP 397 >ref|YP_001353810.1| membrane protease subunit HflK [Janthinobacterium sp. Marseille] gb|ABR90058.1| membrane protease subunit HflK [Janthinobacterium sp. Marseille] Length = 424 Score = 572 bits (1473), Expect = e-161, Method: Compositional matrix adjust. Identities = 294/381 (77%), Positives = 333/381 (87%), Gaps = 11/381 (2%) Query: 11 IKFSLNDPQWGRGSQDDNNRQNQNNGNNGKKPDDGPPDLDQLWRDFNQRLSRLFGKRGGG 70 +KFSLNDP+WGRGS DDNN+ NQ+N K+P+DGPPDLDQLWRDFNQRLS +FG + G Sbjct: 1 MKFSLNDPRWGRGS-DDNNK-NQDN----KRPNDGPPDLDQLWRDFNQRLSNIFGNKKNG 54 Query: 71 GSDNGDGGGFN-----RGDIKGAGIGAGVIAVIVAFLWLASGFFIVQEGQTAVVMTFGKY 125 G NG + D++GAGIGA +IA IVAFLWL SGFFIVQEGQT VVMTFGKY Sbjct: 55 GGGNGGDSSGGGMGGFKPDMRGAGIGAAIIAGIVAFLWLVSGFFIVQEGQTGVVMTFGKY 114 Query: 126 SHTTLPGFNWRWPYPLQSHEIVNVSQVRTAEIGYRSNAKNKQLKEALMLTDDENIIDIQF 185 SH T GFNWRWP P+QSHEIVNVSQVRT E+GYR N KNKQ +E+LMLT+DENIIDIQF Sbjct: 115 SHMTPAGFNWRWPTPIQSHEIVNVSQVRTVEVGYRGNVKNKQQQESLMLTEDENIIDIQF 174 Query: 186 AVQYKLKNAAEWLFNNRDQDETVRQVAETAIREIVGRSKMDFVLYEGREKVALDVGQLMQ 245 AVQY LKNA++W+FNNR+Q+E V+QVAETAIRE+VGRSKMDFVLYEGREK+A D QLMQ Sbjct: 175 AVQYTLKNASDWVFNNREQEEMVKQVAETAIREVVGRSKMDFVLYEGREKIAFDSSQLMQ 234 Query: 246 QILDRYKSGVQITNVTMQGVQPPEQVQAAFDDAVKAGQDRERQKNEGQAYANDVIPKASG 305 QI+DRYKSGVQITNVTMQGVQPPEQVQA+FDDAVKAGQDRERQKNEGQAYANDVIP+A G Sbjct: 235 QIVDRYKSGVQITNVTMQGVQPPEQVQASFDDAVKAGQDRERQKNEGQAYANDVIPRARG 294 Query: 306 AASRLLEEAEAYRSRIVANAEGDAARFKQVLEEYQKAPAVTRDRMYLETMQQIFSNTTKV 365 AASRLL+E+EAYRS + ANA+G+A+RFKQVL EYQKAPAVTRDRMYLETMQ+IFS+TTKV Sbjct: 295 AASRLLQESEAYRSSVTANAQGEASRFKQVLVEYQKAPAVTRDRMYLETMQKIFSSTTKV 354 Query: 366 MVDAKSGNNLLYLPLDKLIQQ 386 MVD+K N+L+YLPLDKLI Q Sbjct: 355 MVDSKGNNSLIYLPLDKLISQ 375 >ref|ZP_04578196.1| membrane protease subunit HflK [Oxalobacter formigenes OXCC13] gb|EEO29169.1| membrane protease subunit HflK [Oxalobacter formigenes OXCC13] Length = 419 Score = 504 bits (1299), Expect = e-141, Method: Compositional matrix adjust. Identities = 239/367 (65%), Positives = 298/367 (81%), Gaps = 7/367 (1%) Query: 46 PPDLDQLWRDFNQRLSRLFGKRGGGGSDNGDGGGFNR-------GDIKGAGIGAGVIAVI 98 PPDLD++W+DFN R++RLF + G+D + KG + ++ I Sbjct: 31 PPDLDKMWKDFNNRINRLFRWKKKKGNDPQKPDDEDDDPYNDKVNGTKGLKMALCILFGI 90 Query: 99 VAFLWLASGFFIVQEGQTAVVMTFGKYSHTTLPGFNWRWPYPLQSHEIVNVSQVRTAEIG 158 A WLA+GFF+VQEGQT +VMTFG++SH PGFNWR P+P+QSHE+VNVSQVRT E+G Sbjct: 91 AAAFWLATGFFVVQEGQTGIVMTFGRFSHFAAPGFNWRKPWPIQSHEVVNVSQVRTVEVG 150 Query: 159 YRSNAKNKQLKEALMLTDDENIIDIQFAVQYKLKNAAEWLFNNRDQDETVRQVAETAIRE 218 YR+ KNK+L+EALMLT+DENI+DIQFAVQYKLKNA++W+FNNRDQ++ VRQVAETAIRE Sbjct: 151 YRTTLKNKRLEEALMLTNDENIVDIQFAVQYKLKNASDWVFNNRDQEDMVRQVAETAIRE 210 Query: 219 IVGRSKMDFVLYEGREKVALDVGQLMQQILDRYKSGVQITNVTMQGVQPPEQVQAAFDDA 278 +VG KMDFVLYEGR+++A + +LMQQI D+Y +GV +T+VTMQGVQPPE+VQAAFDDA Sbjct: 211 VVGGKKMDFVLYEGRDQIASEAQKLMQQIFDQYHAGVLVTSVTMQGVQPPEEVQAAFDDA 270 Query: 279 VKAGQDRERQKNEGQAYANDVIPKASGAASRLLEEAEAYRSRIVANAEGDAARFKQVLEE 338 VKAGQDRER KNEGQAYAN+V+P+A GAA+RL EEAE YR R++ANAEGD +RFKQ++ E Sbjct: 271 VKAGQDRERLKNEGQAYANEVVPRAKGAAARLKEEAEGYRQRVIANAEGDTSRFKQIVRE 330 Query: 339 YQKAPAVTRDRMYLETMQQIFSNTTKVMVDAKSGNNLLYLPLDKLIQQSDNAAAAAKPAT 398 YQKAPAVTRDRMYLETMQ+IFSNTTK+MVD+K GN LLYLPLDKLI QS NA+++ + Sbjct: 331 YQKAPAVTRDRMYLETMQEIFSNTTKLMVDSKKGNQLLYLPLDKLISQSGNASSSLGNSA 390 Query: 399 APAGSST 405 + A + T Sbjct: 391 SGASTET 397