BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0063.p         (141 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003776352.1| nucleoside-diphosphate kinase [Herbaspirillu...   269   1e-70
ref|ZP_08275719.1| Nucleoside diphosphate kinase [Oxalobacterace...   267   5e-70
ref|YP_001896163.1| nucleoside diphosphate kinase [Burkholderia ...   264   4e-69
ref|YP_004752567.1| nucleoside diphosphate kinase [Collimonas fu...   263   5e-69
ref|YP_559416.1| nucleoside diphosphate kinase [Burkholderia xen...   263   7e-69

>ref|YP_003776352.1| nucleoside-diphosphate kinase [Herbaspirillum seropedicae SmR1]
 emb|CAM32572.1| Nucleoside-diphosphate kinase protein [Herbaspirillum seropedicae]
 gb|ADJ64444.1| nucleoside-diphosphate kinase protein [Herbaspirillum seropedicae
           SmR1]
          Length = 141

 Score =  269 bits (687), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 130/141 (92%), Positives = 136/141 (96%)

Query: 1   MAIERTLSIIKPDAVAKNVIGQIYTRFENAGLKIIAARMIHLSRAEAEGFYAVHRERPFF 60
           MAIERTLSIIKPDAVAKNVIGQIYTRFENAGLK+IAARM  LSRAEAEGFYAVHRERPFF
Sbjct: 1   MAIERTLSIIKPDAVAKNVIGQIYTRFENAGLKVIAARMAQLSRAEAEGFYAVHRERPFF 60

Query: 61  KDLVDFMVSGPVIVQALEGENAILKHRDLMGATDPKKAEKGTIRADFADSIDANAVHGSD 120
           KDLVDFMVSGPV++Q LEGE AILK+RDLMGATDPKKAEKGTIRADFADSIDANAVHGSD
Sbjct: 61  KDLVDFMVSGPVMIQVLEGEGAILKNRDLMGATDPKKAEKGTIRADFADSIDANAVHGSD 120

Query: 121 AAETAKVEISYFFPALNIYSR 141
           A ETAKVEI+YFFPALN+YSR
Sbjct: 121 ADETAKVEIAYFFPALNVYSR 141


>ref|ZP_08275719.1| Nucleoside diphosphate kinase [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF30806.1| Nucleoside diphosphate kinase [Oxalobacteraceae bacterium IMCC9480]
          Length = 141

 Score =  267 bits (682), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 127/141 (90%), Positives = 136/141 (96%)

Query: 1   MAIERTLSIIKPDAVAKNVIGQIYTRFENAGLKIIAARMIHLSRAEAEGFYAVHRERPFF 60
           M+IERTLSIIKPDAVAKNVIGQIYTRFENAGLKIIA+RM+HLSR EAEGFYAVH  RPFF
Sbjct: 1   MSIERTLSIIKPDAVAKNVIGQIYTRFENAGLKIIASRMMHLSRTEAEGFYAVHSARPFF 60

Query: 61  KDLVDFMVSGPVIVQALEGENAILKHRDLMGATDPKKAEKGTIRADFADSIDANAVHGSD 120
           KDLVDFM+SGPV+VQALEGENAI KHRDL+GATDPKKA+KGTIRADFADSIDANAVHGSD
Sbjct: 61  KDLVDFMISGPVVVQALEGENAIAKHRDLLGATDPKKADKGTIRADFADSIDANAVHGSD 120

Query: 121 AAETAKVEISYFFPALNIYSR 141
           A ETA+VEI+YFFPALNIYSR
Sbjct: 121 AVETAQVEIAYFFPALNIYSR 141


>ref|YP_001896163.1| nucleoside diphosphate kinase [Burkholderia phytofirmans PsJN]
 sp|B2SXT3.1|NDK_BURPP RecName: Full=Nucleoside diphosphate kinase; Short=NDK; Short=NDP
           kinase; AltName: Full=Nucleoside-2-P kinase
 gb|ACD16939.1| Nucleoside-diphosphate kinase [Burkholderia phytofirmans PsJN]
          Length = 141

 Score =  264 bits (674), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 125/141 (88%), Positives = 136/141 (96%)

Query: 1   MAIERTLSIIKPDAVAKNVIGQIYTRFENAGLKIIAARMIHLSRAEAEGFYAVHRERPFF 60
           MAIERTLSIIKPDAVAKNVIGQIY+RFENAGLKI+A+RM+HLSRA+AE FYAVH  RPFF
Sbjct: 1   MAIERTLSIIKPDAVAKNVIGQIYSRFENAGLKIVASRMVHLSRADAEKFYAVHAARPFF 60

Query: 61  KDLVDFMVSGPVIVQALEGENAILKHRDLMGATDPKKAEKGTIRADFADSIDANAVHGSD 120
           KDLVDFM+SGPV+VQALEGENAILKHRDLMGATDPKKAEKGTIRADFADSIDANAVHGSD
Sbjct: 61  KDLVDFMISGPVVVQALEGENAILKHRDLMGATDPKKAEKGTIRADFADSIDANAVHGSD 120

Query: 121 AAETAKVEISYFFPALNIYSR 141
           AAETA VEI++FFP +N+YSR
Sbjct: 121 AAETAAVEIAFFFPQVNVYSR 141


>ref|YP_004752567.1| nucleoside diphosphate kinase [Collimonas fungivorans Ter331]
 gb|AEK61744.1| Nucleoside diphosphate kinase [Collimonas fungivorans Ter331]
          Length = 135

 Score =  263 bits (673), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 126/135 (93%), Positives = 132/135 (97%)

Query: 1   MAIERTLSIIKPDAVAKNVIGQIYTRFENAGLKIIAARMIHLSRAEAEGFYAVHRERPFF 60
           MAIERTLSIIKPDAVAKNVIGQIYTRFENAGLKI+AARM HLSRAEAEGFYAVHRERPFF
Sbjct: 1   MAIERTLSIIKPDAVAKNVIGQIYTRFENAGLKIVAARMTHLSRAEAEGFYAVHRERPFF 60

Query: 61  KDLVDFMVSGPVIVQALEGENAILKHRDLMGATDPKKAEKGTIRADFADSIDANAVHGSD 120
           KDLVDFM+SGPV++QALEGENA+LKHRDLMGATDPKKAEKGTIRADFADSIDANAVHGSD
Sbjct: 61  KDLVDFMISGPVMIQALEGENAVLKHRDLMGATDPKKAEKGTIRADFADSIDANAVHGSD 120

Query: 121 AAETAKVEISYFFPA 135
           A E AKVEI+YFFPA
Sbjct: 121 AVEAAKVEIAYFFPA 135


>ref|YP_559416.1| nucleoside diphosphate kinase [Burkholderia xenovorans LB400]
 ref|ZP_06841823.1| Nucleoside-diphosphate kinase [Burkholderia sp. Ch1-1]
 sp|Q13X25.1|NDK_BURXL RecName: Full=Nucleoside diphosphate kinase; Short=NDK; Short=NDP
           kinase; AltName: Full=Nucleoside-2-P kinase
 gb|ABE31364.1| nucleoside diphosphate kinase [Burkholderia xenovorans LB400]
 gb|EFG70660.1| Nucleoside-diphosphate kinase [Burkholderia sp. Ch1-1]
          Length = 141

 Score =  263 bits (672), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 125/141 (88%), Positives = 135/141 (95%)

Query: 1   MAIERTLSIIKPDAVAKNVIGQIYTRFENAGLKIIAARMIHLSRAEAEGFYAVHRERPFF 60
           MAIERTLSIIKPDAVAKNVIGQIYTRFENAGLKI+A+RM+HLSRA+AE FYAVH  RPFF
Sbjct: 1   MAIERTLSIIKPDAVAKNVIGQIYTRFENAGLKIVASRMVHLSRADAEKFYAVHAARPFF 60

Query: 61  KDLVDFMVSGPVIVQALEGENAILKHRDLMGATDPKKAEKGTIRADFADSIDANAVHGSD 120
           KDLVDFM+SGPV+VQALEGENAILKHRDLMGATDPKKAEKGTIRADFADSIDANAVHGSD
Sbjct: 61  KDLVDFMISGPVVVQALEGENAILKHRDLMGATDPKKAEKGTIRADFADSIDANAVHGSD 120

Query: 121 AAETAKVEISYFFPALNIYSR 141
           A ETA VEI++FFP +N+YSR
Sbjct: 121 APETAAVEIAFFFPQVNVYSR 141