BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0059.p         (64 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003776356.1| NlpD precursor lipoprotein [Herbaspirillum s...   125   2e-27
ref|YP_004752563.1| lipoprotein [Collimonas fungivorans Ter331] ...   123   1e-26
ref|YP_001353825.1| lipoprotein nlpD precursor [Janthinobacteriu...   120   1e-25
ref|YP_001099558.1| lipoprotein precursor [Herminiimonas arsenic...   114   7e-24
ref|YP_003166618.1| peptidase M23 [Candidatus Accumulibacter pho...   114   7e-24

>ref|YP_003776356.1| NlpD precursor lipoprotein [Herbaspirillum seropedicae SmR1]
 gb|ADJ64448.1| NlpD precursor lipoprotein [Herbaspirillum seropedicae SmR1]
          Length = 332

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 57/64 (89%), Positives = 63/64 (98%)

Query: 1   VKHSNNLLSAYAHNKTILVKEGQAVTKGQKIAEMGNSDSDSVKLHFEIRQQGKPVDPSKY 60
           +KH++NLLSAYAHN+TILVKEGQ+VTKGQKIAEMG SDSD+VKLHFEIRQQGKPVDPSKY
Sbjct: 269 IKHTSNLLSAYAHNQTILVKEGQSVTKGQKIAEMGKSDSDTVKLHFEIRQQGKPVDPSKY 328

Query: 61  LPPR 64
           LPPR
Sbjct: 329 LPPR 332


>ref|YP_004752563.1| lipoprotein [Collimonas fungivorans Ter331]
 gb|AEK61740.1| lipoprotein precursor [Collimonas fungivorans Ter331]
          Length = 324

 Score =  123 bits (308), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 56/64 (87%), Positives = 62/64 (96%)

Query: 1   VKHSNNLLSAYAHNKTILVKEGQAVTKGQKIAEMGNSDSDSVKLHFEIRQQGKPVDPSKY 60
           +KH++NLLSAYAHNKTILVKEGQ V+KGQKIAEMGNSDSD+VKLHFEIRQQGKPVDPSK+
Sbjct: 261 IKHTSNLLSAYAHNKTILVKEGQTVSKGQKIAEMGNSDSDAVKLHFEIRQQGKPVDPSKF 320

Query: 61  LPPR 64
           LP R
Sbjct: 321 LPSR 324


>ref|YP_001353825.1| lipoprotein nlpD precursor [Janthinobacterium sp. Marseille]
 gb|ABR89363.1| lipoprotein nlpD precursor [Janthinobacterium sp. Marseille]
          Length = 317

 Score =  120 bits (300), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 1   VKHSNNLLSAYAHNKTILVKEGQAVTKGQKIAEMGNSDSDSVKLHFEIRQQGKPVDPSKY 60
           VKH++NLLSAYAHNK ILVKEGQ V KGQKIAEMG+SDSDSVKLHFEIRQQGKPVDPSK+
Sbjct: 254 VKHTSNLLSAYAHNKAILVKEGQNVNKGQKIAEMGDSDSDSVKLHFEIRQQGKPVDPSKF 313

Query: 61  LPPR 64
           LP R
Sbjct: 314 LPSR 317


>ref|YP_001099558.1| lipoprotein precursor [Herminiimonas arsenicoxydans]
 emb|CAL61431.1| putative Peptidase M23B [Herminiimonas arsenicoxydans]
          Length = 304

 Score =  114 bits (284), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 52/64 (81%), Positives = 60/64 (93%)

Query: 1   VKHSNNLLSAYAHNKTILVKEGQAVTKGQKIAEMGNSDSDSVKLHFEIRQQGKPVDPSKY 60
           VKH++ LLSAYAHNK I VKEGQ+V+KGQKIA+MG+SD+DSVKLHFEIRQQGKPVDPSK+
Sbjct: 241 VKHTSTLLSAYAHNKIIHVKEGQSVSKGQKIADMGDSDADSVKLHFEIRQQGKPVDPSKF 300

Query: 61  LPPR 64
           LP R
Sbjct: 301 LPSR 304


>ref|YP_003166618.1| peptidase M23 [Candidatus Accumulibacter phosphatis clade IIA str.
           UW-1]
 gb|ACV34689.1| Peptidase M23 [Candidatus Accumulibacter phosphatis clade IIA str.
           UW-1]
          Length = 329

 Score =  114 bits (284), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 50/64 (78%), Positives = 60/64 (93%)

Query: 1   VKHSNNLLSAYAHNKTILVKEGQAVTKGQKIAEMGNSDSDSVKLHFEIRQQGKPVDPSKY 60
           VKH+NN L+AYAHNKT+LVKEGQ+V KGQKIAEMG++D+D VKLHFE+R+QGKPVDP K+
Sbjct: 266 VKHNNNFLTAYAHNKTVLVKEGQSVGKGQKIAEMGDTDADQVKLHFEVRRQGKPVDPLKH 325

Query: 61  LPPR 64
           LPPR
Sbjct: 326 LPPR 329