BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0044.p         (218 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003776364.1| dihydrolipoamide succinyltransferase compone...   433   e-119
ref|YP_004752408.1| dihydrolipoamide succinyltransferase compone...   419   e-115
ref|YP_004360408.1| 2-oxoglutarate dehydrogenase, E2 subunit, di...   417   e-115
ref|YP_002911806.1| dihydrolipoamide succinyltransferase [Burkho...   416   e-115
ref|ZP_03268976.1| 2-oxoglutarate dehydrogenase, E2 subunit, dih...   416   e-114

>ref|YP_003776364.1| dihydrolipoamide succinyltransferase component of 2-oxoglutarate
           dehydrogenase complex protein [Herbaspirillum
           seropedicae SmR1]
 emb|CAM32667.1| Dihydrolipoamide succinyltransferase component of 2-oxoglutarate
           dehydrogenase complex protein [Herbaspirillum
           seropedicae]
 gb|ADJ64456.1| dihydrolipoamide succinyltransferase component of 2-oxoglutarate
           dehydrogenase complex protein [Herbaspirillum
           seropedicae SmR1]
          Length = 413

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 205/218 (94%), Positives = 217/218 (99%)

Query: 1   VAERLLQSQATNAILTTFNEVNMQPVLDLRAKYKDKFEKEHGVKLGFMSFFVKAVVHALK 60
           VAERL+QSQ+TNAILTTFNE+NMQPV+DLR KYKDKFEKEHGVKLGFMSFFVKAVVHALK
Sbjct: 196 VAERLVQSQSTNAILTTFNEINMQPVIDLRNKYKDKFEKEHGVKLGFMSFFVKAVVHALK 255

Query: 61  KYPIVNASVDGNDIVYHGYFDIGVAVGSPRGLVVPVLRDADQLSIADIEKKIGEFGQKAK 120
           KYPIVNASVDGNDIVYHGYFDIGVAVGSPRGLVVP+LRDADQ+SIADIEKKIGEFGQKAK
Sbjct: 256 KYPIVNASVDGNDIVYHGYFDIGVAVGSPRGLVVPILRDADQMSIADIEKKIGEFGQKAK 315

Query: 121 DGKLSIEEMTGGTFTVSNGGTFGSMLSTPIINPPQSAILGIHATKDRAVVENGQIVIRPM 180
           DGKLSIEE++GGTFTVSNGGTFGSMLSTPIINPPQSAILGIHATK+RAVVENGQ+V+RP+
Sbjct: 316 DGKLSIEELSGGTFTVSNGGTFGSMLSTPIINPPQSAILGIHATKERAVVENGQVVVRPI 375

Query: 181 NYFALSYDHRIIDGREAVLSLVAIKEALEDPARLLLDL 218
           NYFALSYDHRIIDGREAVLSLVAIKEALEDPARLLLDL
Sbjct: 376 NYFALSYDHRIIDGREAVLSLVAIKEALEDPARLLLDL 413


>ref|YP_004752408.1| dihydrolipoamide succinyltransferase component (E2) of
           2-oxoglutarate dehydrogenase complex [Collimonas
           fungivorans Ter331]
 gb|AEK61585.1| Dihydrolipoamide succinyltransferase component (E2) of
           2-oxoglutarate dehydrogenase complex [Collimonas
           fungivorans Ter331]
          Length = 419

 Score =  419 bits (1076), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 196/218 (89%), Positives = 213/218 (97%)

Query: 1   VAERLLQSQATNAILTTFNEVNMQPVLDLRAKYKDKFEKEHGVKLGFMSFFVKAVVHALK 60
           +AERL+QSQ+TNAILTTFNEVNMQPV+DLR KYKDKFEKEHGVKLGFMSFFVKA V ALK
Sbjct: 202 IAERLVQSQSTNAILTTFNEVNMQPVMDLRTKYKDKFEKEHGVKLGFMSFFVKAAVAALK 261

Query: 61  KYPIVNASVDGNDIVYHGYFDIGVAVGSPRGLVVPVLRDADQLSIADIEKKIGEFGQKAK 120
           KYPIVNASVDGNDIVYHGYFDIG+AVGSPRGLVVPVLRDADQ+SIADIEKKIGEFG KAK
Sbjct: 262 KYPIVNASVDGNDIVYHGYFDIGIAVGSPRGLVVPVLRDADQMSIADIEKKIGEFGAKAK 321

Query: 121 DGKLSIEEMTGGTFTVSNGGTFGSMLSTPIINPPQSAILGIHATKDRAVVENGQIVIRPM 180
           DGKL+++++TGGTF++SNGGTFGSMLSTPIINPPQSAILG+HATKDRAVVENGQIVIRPM
Sbjct: 322 DGKLTLDDLTGGTFSISNGGTFGSMLSTPIINPPQSAILGVHATKDRAVVENGQIVIRPM 381

Query: 181 NYFALSYDHRIIDGREAVLSLVAIKEALEDPARLLLDL 218
           NY A+SYDHRIIDGREAVL+LVA+KEALEDPARLLLDL
Sbjct: 382 NYLAMSYDHRIIDGREAVLALVAMKEALEDPARLLLDL 419


>ref|YP_004360408.1| 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide
           succinyltransferase [Burkholderia gladioli BSR3]
 gb|AEA60452.1| 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide
           succinyltransferase [Burkholderia gladioli BSR3]
          Length = 427

 Score =  417 bits (1072), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 195/218 (89%), Positives = 212/218 (97%)

Query: 1   VAERLLQSQATNAILTTFNEVNMQPVLDLRAKYKDKFEKEHGVKLGFMSFFVKAVVHALK 60
           +AERLL+SQ TNAILTTFNEVNMQPV+DLRAKYKDKFEKEHGVKLGFMSFFVKA VHALK
Sbjct: 210 IAERLLESQQTNAILTTFNEVNMQPVMDLRAKYKDKFEKEHGVKLGFMSFFVKAAVHALK 269

Query: 61  KYPIVNASVDGNDIVYHGYFDIGVAVGSPRGLVVPVLRDADQLSIADIEKKIGEFGQKAK 120
           K+P+VNAS+DGNDIVYHGYFDIG+AVGSPRGLVVP+LR+ADQLS+ADIEKKI EFGQKAK
Sbjct: 270 KFPLVNASIDGNDIVYHGYFDIGIAVGSPRGLVVPILRNADQLSLADIEKKIAEFGQKAK 329

Query: 121 DGKLSIEEMTGGTFTVSNGGTFGSMLSTPIINPPQSAILGIHATKDRAVVENGQIVIRPM 180
           DGKLSIEEMTGGTF++SNGG FGSMLSTPIINPPQSAILG+HATK+R VVENGQIVIRP+
Sbjct: 330 DGKLSIEEMTGGTFSISNGGVFGSMLSTPIINPPQSAILGVHATKERPVVENGQIVIRPI 389

Query: 181 NYFALSYDHRIIDGREAVLSLVAIKEALEDPARLLLDL 218
           NY ALSYDHRIIDGREAVLSLVA+K+ALEDPARLLLDL
Sbjct: 390 NYLALSYDHRIIDGREAVLSLVAMKDALEDPARLLLDL 427


>ref|YP_002911806.1| dihydrolipoamide succinyltransferase [Burkholderia glumae BGR1]
 gb|ACR29102.1| dihydrolipoamide succinyltransferase [Burkholderia glumae BGR1]
          Length = 423

 Score =  416 bits (1070), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 195/218 (89%), Positives = 212/218 (97%)

Query: 1   VAERLLQSQATNAILTTFNEVNMQPVLDLRAKYKDKFEKEHGVKLGFMSFFVKAVVHALK 60
           +AERLL+SQ TNAILTTFNEVNMQPV+DLRAKYKDKFEKEHGVKLGFMSFFVKA VHALK
Sbjct: 206 IAERLLESQQTNAILTTFNEVNMQPVMDLRAKYKDKFEKEHGVKLGFMSFFVKAAVHALK 265

Query: 61  KYPIVNASVDGNDIVYHGYFDIGVAVGSPRGLVVPVLRDADQLSIADIEKKIGEFGQKAK 120
           K+P+VNAS+DGNDIVYHGYFDIG+AVGSPRGLVVP+LR+ADQLS+ADIEKKI EFGQKAK
Sbjct: 266 KFPLVNASIDGNDIVYHGYFDIGIAVGSPRGLVVPILRNADQLSLADIEKKIAEFGQKAK 325

Query: 121 DGKLSIEEMTGGTFTVSNGGTFGSMLSTPIINPPQSAILGIHATKDRAVVENGQIVIRPM 180
           DGKLSIEEMTGGTF++SNGG FGSMLSTPIINPPQSAILG+HATK+R VVENGQIVIRP+
Sbjct: 326 DGKLSIEEMTGGTFSISNGGVFGSMLSTPIINPPQSAILGVHATKERPVVENGQIVIRPI 385

Query: 181 NYFALSYDHRIIDGREAVLSLVAIKEALEDPARLLLDL 218
           NY ALSYDHRIIDGREAVLSLVA+K+ALEDPARLLLDL
Sbjct: 386 NYLALSYDHRIIDGREAVLSLVAMKDALEDPARLLLDL 423


>ref|ZP_03268976.1| 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide
           succinyltransferase [Burkholderia sp. H160]
 gb|EDZ99448.1| 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide
           succinyltransferase [Burkholderia sp. H160]
          Length = 422

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 195/218 (89%), Positives = 211/218 (96%)

Query: 1   VAERLLQSQATNAILTTFNEVNMQPVLDLRAKYKDKFEKEHGVKLGFMSFFVKAVVHALK 60
           +AERLL+SQ TNAILTTFNEVNM PV+DLR KYKDKFEKEHGVKLGFMSFFVKA VHALK
Sbjct: 205 IAERLLESQQTNAILTTFNEVNMAPVMDLRNKYKDKFEKEHGVKLGFMSFFVKAAVHALK 264

Query: 61  KYPIVNASVDGNDIVYHGYFDIGVAVGSPRGLVVPVLRDADQLSIADIEKKIGEFGQKAK 120
           K+P+VNAS+DGNDIVYHGYFDIG+AVGSPRGLVVP+LR+ADQLS+ADIEKKI EFGQKAK
Sbjct: 265 KFPLVNASIDGNDIVYHGYFDIGIAVGSPRGLVVPILRNADQLSLADIEKKIAEFGQKAK 324

Query: 121 DGKLSIEEMTGGTFTVSNGGTFGSMLSTPIINPPQSAILGIHATKDRAVVENGQIVIRPM 180
           DGKLSIEEMTGGTF++SNGG FGSMLSTPIINPPQSAILG+HATK+RAVVENGQIVIRPM
Sbjct: 325 DGKLSIEEMTGGTFSISNGGVFGSMLSTPIINPPQSAILGVHATKERAVVENGQIVIRPM 384

Query: 181 NYFALSYDHRIIDGREAVLSLVAIKEALEDPARLLLDL 218
           NY ALSYDHRIIDGREAVLSLVA+K+ALEDPARLLLDL
Sbjct: 385 NYLALSYDHRIIDGREAVLSLVAMKDALEDPARLLLDL 422