BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0027.p         (103 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003747907.1| ferredoxin protein [Ralstonia solanacearum C...   134   4e-30
ref|ZP_00944253.1| Ferredoxin, 2Fe-2s [Ralstonia solanacearum UW...   133   7e-30
emb|CBJ40233.1| putative ferredoxin protein [Ralstonia solanacea...   132   2e-29
emb|CAQ36541.1| ferredoxin protein [Ralstonia solanacearum MolK2]     132   2e-29
ref|NP_522188.1| putative ferredoxin protein [Ralstonia solanace...   131   3e-29

>ref|YP_003747907.1| ferredoxin protein [Ralstonia solanacearum CFBP2957]
 emb|CBJ53507.1| putative ferredoxin protein [Ralstonia solanacearum CFBP2957]
          Length = 109

 Score =  134 bits (337), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 65/98 (66%), Positives = 75/98 (76%), Gaps = 1/98 (1%)

Query: 1   MCTGPRCTEDGVLAEAMFAVLGEQIDARPELRVKRTRTHCMVACKAQAPVVVVYPEGVWY 60
           MCTGPRCT+DG  AEA+F VLG+ IDA   LRVKRTRTHC   CK Q P++VVYP+GVWY
Sbjct: 10  MCTGPRCTQDGAEAEALFKVLGQTIDACEGLRVKRTRTHCFAVCK-QGPLMVVYPDGVWY 68

Query: 61  RCEDAAAIERVVVEHLEGGRQVTDLIFHRLGSGDVNPE 98
           R  DAA++ R+V EHL GGR + D IFHR G GDV PE
Sbjct: 69  RNLDAASVRRIVDEHLAGGRPIEDKIFHRTGLGDVEPE 106


>ref|ZP_00944253.1| Ferredoxin, 2Fe-2s [Ralstonia solanacearum UW551]
 ref|YP_002257464.1| ferredoxin protein [Ralstonia solanacearum IPO1609]
 gb|EAP73320.1| Ferredoxin, 2Fe-2s [Ralstonia solanacearum UW551]
 emb|CAQ59349.1| ferredoxin protein [Ralstonia solanacearum IPO1609]
 gb|AEG71612.1| ferredoxin protein [Ralstonia solanacearum Po82]
          Length = 109

 Score =  133 bits (335), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 64/98 (65%), Positives = 75/98 (76%), Gaps = 1/98 (1%)

Query: 1   MCTGPRCTEDGVLAEAMFAVLGEQIDARPELRVKRTRTHCMVACKAQAPVVVVYPEGVWY 60
           MCTGPRCT+DG  AEA+F VLG+ IDA   LRVKRTRTHC   CK Q P++VVYP+GVWY
Sbjct: 10  MCTGPRCTQDGAEAEALFKVLGQTIDACEGLRVKRTRTHCFAVCK-QGPLMVVYPDGVWY 68

Query: 61  RCEDAAAIERVVVEHLEGGRQVTDLIFHRLGSGDVNPE 98
           R  DAA++ R+V EHL GGR + D +FHR G GDV PE
Sbjct: 69  RNLDAASVRRIVDEHLAGGRPIEDKVFHRTGLGDVEPE 106


>emb|CBJ40233.1| putative ferredoxin protein [Ralstonia solanacearum CMR15]
          Length = 109

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/98 (66%), Positives = 74/98 (75%), Gaps = 1/98 (1%)

Query: 1   MCTGPRCTEDGVLAEAMFAVLGEQIDARPELRVKRTRTHCMVACKAQAPVVVVYPEGVWY 60
           MCTGPRCT+DG  AEA+F VLG+ IDA   LRVKRTRTHC   CK Q P++VVYP+GVWY
Sbjct: 10  MCTGPRCTQDGAEAEALFKVLGQTIDACEGLRVKRTRTHCFAVCK-QGPLMVVYPDGVWY 68

Query: 61  RCEDAAAIERVVVEHLEGGRQVTDLIFHRLGSGDVNPE 98
           R  DAA++ R+V EHL GG  V D IFHR G GDV PE
Sbjct: 69  RNLDAASVRRIVDEHLAGGTPVEDRIFHRTGLGDVEPE 106


>emb|CAQ36541.1| ferredoxin protein [Ralstonia solanacearum MolK2]
          Length = 109

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 63/98 (64%), Positives = 74/98 (75%), Gaps = 1/98 (1%)

Query: 1   MCTGPRCTEDGVLAEAMFAVLGEQIDARPELRVKRTRTHCMVACKAQAPVVVVYPEGVWY 60
           MCTGPRCT+DG  AEA+F VLG+ IDA   LRVKRTRTHC   CK Q P++VVYP+GVWY
Sbjct: 10  MCTGPRCTQDGAEAEALFKVLGQTIDACEGLRVKRTRTHCFAVCK-QGPLMVVYPDGVWY 68

Query: 61  RCEDAAAIERVVVEHLEGGRQVTDLIFHRLGSGDVNPE 98
           R  DA ++ R+V EHL GGR + D +FHR G GDV PE
Sbjct: 69  RNLDATSVRRIVDEHLAGGRPIEDKVFHRTGLGDVEPE 106


>ref|NP_522188.1| putative ferredoxin protein [Ralstonia solanacearum GMI1000]
 emb|CAD17778.1| putative ferredoxin protein [Ralstonia solanacearum GMI1000]
          Length = 109

 Score =  131 bits (330), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 65/98 (66%), Positives = 74/98 (75%), Gaps = 1/98 (1%)

Query: 1   MCTGPRCTEDGVLAEAMFAVLGEQIDARPELRVKRTRTHCMVACKAQAPVVVVYPEGVWY 60
           MCTGPRCT+DG  AEA+F VLG+ IDA   LRVKRTRTHC   CK Q P++VVYP+GVWY
Sbjct: 10  MCTGPRCTQDGAEAEALFNVLGQTIDACEGLRVKRTRTHCFAVCK-QGPLMVVYPDGVWY 68

Query: 61  RCEDAAAIERVVVEHLEGGRQVTDLIFHRLGSGDVNPE 98
           R  DAA++ R+V EHL GG  V D IFHR G GDV PE
Sbjct: 69  RNLDAASVRRIVDEHLAGGAPVEDRIFHRTGLGDVEPE 106