BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0026.p (223 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776062.1| integral membrane protein [Herbaspirillum se... 231 6e-59 ref|ZP_08783032.1| cobalt transporter, subunit CbtA [Methylobact... 167 1e-39 ref|YP_004278124.1| hypothetical protein AGROH133_04652 [Agrobac... 155 6e-36 ref|YP_274434.1| hypothetical protein PSPPH_2223 [Pseudomonas sy... 152 5e-35 ref|ZP_05639195.1| hypothetical protein PsyrptA_17966 [Pseudomon... 151 5e-35 >ref|YP_003776062.1| integral membrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ64154.1| integral membrane protein [Herbaspirillum seropedicae SmR1] Length = 241 Score = 231 bits (589), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 128/220 (58%), Positives = 151/220 (68%), Gaps = 32/220 (14%) Query: 10 IASVVLLAGALAGLLLTAVQQLQVSRIILQAEVYEEAAAAKAHELAHAAASAPASAGAPV 69 +AS V++AGAL+G+LL+ VQQ QV ++ILQAE YE+AA A++AP +A Sbjct: 1 MASAVVVAGALSGVLLSGVQQFQVEKLILQAEQYEKAAE-------EGASAAPQAA---- 49 Query: 70 AAESPEHEHEHEHE---------------HGDEWEPANGFERTAYTVLANVSMAIGFGLF 114 HEHEH+ D WEPA+G ERT YTVLANVSMA+GF L Sbjct: 50 ------HEHEHDQAHEHAAASAHAHEHSHDADAWEPADGAERTGYTVLANVSMAVGFALL 103 Query: 115 LAAAIVVSGRKVTWRSGLLWGAAGYLVFFVAPSLGLPPEVPGTVAAPLHARQLWWIMTAG 174 L AAI +SGR+V+WRSGLLWG AGY VFFVAPSLGLPPEVPGT+AAPL ARQ WW+MTA Sbjct: 104 LVAAITLSGRQVSWRSGLLWGLAGYGVFFVAPSLGLPPEVPGTLAAPLQARQFWWVMTAV 163 Query: 175 LTAAGLGLGVYARHWTLKLLGLVLLVVPHLVGAPHPAAPG 214 +TAA LGL V+ R W KLL + LLVVPHLVGAP P G Sbjct: 164 MTAASLGLFVFTRAWWCKLLAVALLVVPHLVGAPQPEVHG 203 >ref|ZP_08783032.1| cobalt transporter, subunit CbtA [Methylobacter tundripaludum SV96] gb|EGW19677.1| cobalt transporter, subunit CbtA [Methylobacter tundripaludum SV96] Length = 225 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 101/210 (48%), Positives = 123/210 (58%), Gaps = 27/210 (12%) Query: 1 MINFAVLRRIASVVLLAGALAGLLLTAVQQLQVSRIILQAEVYEEAAAAKAHELAHAAAS 60 M N R + L G LAGLLLTAVQQ+QV +L+AEVYEEAA Sbjct: 1 MFNLTTFRELVIAALWTGLLAGLLLTAVQQIQVIPTLLKAEVYEEAAVV----------- 49 Query: 61 APASAGAPVAAESPEHEHEHEHEHGDEWEPANGFERTAYTVLANVSMAIGFGLFLAAAIV 120 P E+ HEH EW+P NG+ERT +T +AN+S+ +GF L + A + Sbjct: 50 -------------PSTENSHEHH---EWQPENGWERTFFTAVANISLGVGFALLIGAVMC 93 Query: 121 VSGRKVTWRSGLLWGAAGYLVFFVAPSLGLPPEVPGTVAAPLHARQLWWIMTAGLTAAGL 180 + GR WR GLLWG AGYL FFVAPSLGLPPEVPGT AA L RQ WW++T T GL Sbjct: 94 LRGRPGNWRMGLLWGLAGYLTFFVAPSLGLPPEVPGTEAARLADRQSWWLITVLDTGFGL 153 Query: 181 GLGVYARHWTLKLLGLVLLVVPHLVGAPHP 210 L +A+ T + G+VLL PHL+ AP P Sbjct: 154 SLLAFAKTRTNQFFGIVLLAAPHLISAPQP 183 >ref|YP_004278124.1| hypothetical protein AGROH133_04652 [Agrobacterium sp. H13-3] gb|ADY63804.1| hypothetical protein AGROH133_04652 [Agrobacterium sp. H13-3] Length = 238 Score = 155 bits (391), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 91/206 (44%), Positives = 117/206 (56%), Gaps = 14/206 (6%) Query: 5 AVLRRIASVVLLAGALAGLLLTAVQQLQVSRIILQAEVYEEAAAAKAHELAHAAASAPAS 64 + R I +L G + G ++A+Q + +IL+AE YE A H + APA+ Sbjct: 2 SFFRNIVFTAVLVGIVGGFAVSAMQAFGTTPLILKAETYENAGGEAPH-----SHDAPAT 56 Query: 65 AGAPVAAESPEHEHEHEHEHGDEWEPANGFERTAYTVLANVSMAIGFGLFLAAAIVVSGR 124 GA V P HEH E W PA+GFERTAYTV ANV AIG+ L L I + G Sbjct: 57 TGAAV----PAHEHNEE-----AWSPADGFERTAYTVAANVLTAIGYALVLTGLISLRGT 107 Query: 125 KVTWRSGLLWGAAGYLVFFVAPSLGLPPEVPGTVAAPLHARQLWWIMTAGLTAAGLGLGV 184 WR GLLWG AG+ +AP +GLPPE+PG+ AA L ARQ+WW+ T TA G+ L Sbjct: 108 DAGWREGLLWGVAGFAAVMLAPMIGLPPELPGSPAAALEARQIWWLSTVAATAGGIALIA 167 Query: 185 YARHWTLKLLGLVLLVVPHLVGAPHP 210 + R +L LVL+V H+VGAP P Sbjct: 168 FRREPWAIVLALVLIVALHVVGAPLP 193 >ref|YP_274434.1| hypothetical protein PSPPH_2223 [Pseudomonas syringae pv. phaseolicola 1448A] gb|AAZ34998.1| membrane protein, putative [Pseudomonas syringae pv. phaseolicola 1448A] Length = 271 Score = 152 bits (383), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 95/210 (45%), Positives = 122/210 (58%), Gaps = 22/210 (10%) Query: 3 NFAVLRRIASVVLLAGALAGLLLTAVQQLQVSRIILQAEVYEEAAAAKAHELAHAAASAP 62 + + +RIA G LA LLLT +Q V +I QAE YE A+A + HE A AA+ Sbjct: 34 DSTMFKRIAQTAGFTGLLAALLLTVLQSFWVVPLIQQAETYENASAEQVHEHADGAAA-- 91 Query: 63 ASAGAPVAAESPEHEHEHEHEHGDEWEPANGFERTAYTVLANVSMAIGFGLFLAAAIVVS 122 EH H H+ WEP NG++R T N+ +A+GF L LA + Sbjct: 92 --------------EHSHTHDEA-AWEPENGWQRVLSTTGGNLVVAVGFALMLAGLYTLR 136 Query: 123 --GRKVTWRSGLLWGAAGYLVFFVAPSLGLPPEVPGTVAAPLHARQLWWIMTAGLTAAGL 180 GR V G+ WG AG+ VF +AP+LGLPPE+PGT AA L RQ WWI TA TAAGL Sbjct: 137 APGRTV---QGVWWGLAGFAVFVLAPTLGLPPELPGTAAAELSQRQAWWIGTAASTAAGL 193 Query: 181 GLGVYARHWTLKLLGLVLLVVPHLVGAPHP 210 L V+ ++W LK LG+ +LVVPH++GAP P Sbjct: 194 ALLVFGQNWLLKALGVAILVVPHVIGAPQP 223 >ref|ZP_05639195.1| hypothetical protein PsyrptA_17966 [Pseudomonas syringae pv. tabaci ATCC 11528] gb|EGH90992.1| hypothetical protein PSYTB_14860 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 235 Score = 151 bits (382), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 96/207 (46%), Positives = 121/207 (58%), Gaps = 22/207 (10%) Query: 6 VLRRIASVVLLAGALAGLLLTAVQQLQVSRIILQAEVYEEAAAAKAHELAHAAASAPASA 65 + +RIA G LA LLLT +Q V +I QAE YE A+A + HE A AA+ Sbjct: 1 MFKRIAQTAGFTGLLAALLLTVLQSFWVVPLIQQAETYENASAEQVHEHADGAAA----- 55 Query: 66 GAPVAAESPEHEHEHEHEHGDEWEPANGFERTAYTVLANVSMAIGFGLFLAAAIVVS--G 123 EH H HE WEP NG++R T N+ +A+GF L LA + G Sbjct: 56 -----------EHSHAHEEA-AWEPENGWQRVLSTTGGNLVVAVGFALMLAGLYTLRAPG 103 Query: 124 RKVTWRSGLLWGAAGYLVFFVAPSLGLPPEVPGTVAAPLHARQLWWIMTAGLTAAGLGLG 183 R V G+ WG AG+ VF +AP+LGLPPE+PGT AA L RQ WWI TA TAAGL L Sbjct: 104 RTV---QGVWWGLAGFAVFVLAPTLGLPPELPGTAAAELSQRQAWWIGTAASTAAGLALL 160 Query: 184 VYARHWTLKLLGLVLLVVPHLVGAPHP 210 V+ ++W LK LG+ +LVVPH++GAP P Sbjct: 161 VFGQNWLLKALGVAILVVPHVIGAPQP 187