BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0004.0165.p         (142 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_294465.1| EmrB/QacA family drug resistance transporter [R...   199   8e-50
ref|YP_349523.1| EmrB/QacA family drug resistance transporter [P...   194   4e-48
ref|YP_608292.1| EmrB/QacA family drug resistance transporter [P...   190   7e-47
ref|YP_841292.1| major facilitator superfamily transporter DHA2 ...   189   1e-46
ref|YP_002502512.1| EmrB/QacA subfamily drug resistance transpor...   187   4e-46

>ref|YP_294465.1| EmrB/QacA family drug resistance transporter [Ralstonia eutropha
           JMP134]
 gb|AAZ59621.1| Drug resistance transporter EmrB/QacA subfamily [Ralstonia eutropha
           JMP134]
          Length = 536

 Score =  199 bits (507), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 101/142 (71%), Positives = 112/142 (78%)

Query: 1   VAPVVTLTLGALKPERLKQASGLFNLMRNLGGAIGIAVCGTILNDRTNLHFLRLAEHLNS 60
           VAP VTLTLG+L PERLK ASGLFNLMRNLGGAIGIA C T+LNDR NLHFLR AEHLN 
Sbjct: 395 VAPTVTLTLGSLPPERLKLASGLFNLMRNLGGAIGIAACATVLNDRGNLHFLREAEHLNI 454

Query: 61  ANESMNNLLQNTGANMLAWGLDGGSAPTGALQQLWKLTMREAQTQTFADAFLAVMACFLV 120
            NE+M   LQ+ G+ MLA G D   A T AL+QL+ L  REAQTQTF DAFL VM CF++
Sbjct: 455 RNEAMGAFLQSAGSQMLAAGHDLVDANTVALKQLFALAWREAQTQTFGDAFLIVMVCFVI 514

Query: 121 AIVLIPLMHKVAPPKAPSADAH 142
           A  ++PLM KVAPPKAPSADAH
Sbjct: 515 ATAMVPLMRKVAPPKAPSADAH 536


>ref|YP_349523.1| EmrB/QacA family drug resistance transporter [Pseudomonas
           fluorescens Pf0-1]
 gb|ABA75532.1| transporter, EmrB/QacA subfamily [Pseudomonas fluorescens Pf0-1]
          Length = 530

 Score =  194 bits (492), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 94/142 (66%), Positives = 105/142 (73%)

Query: 1   VAPVVTLTLGALKPERLKQASGLFNLMRNLGGAIGIAVCGTILNDRTNLHFLRLAEHLNS 60
           V P VTLTLG L P RL+ ASGLFNLMRNLGGAIGIA C TILNDRTNLHF RLAEHLNS
Sbjct: 389 VPPAVTLTLGGLAPARLRHASGLFNLMRNLGGAIGIAACATILNDRTNLHFTRLAEHLNS 448

Query: 61  ANESMNNLLQNTGANMLAWGLDGGSAPTGALQQLWKLTMREAQTQTFADAFLAVMACFLV 120
           +NE++N  L   G N  A G  G    T +L+QLW LT REAQTQT+ D FL +M CF +
Sbjct: 449 SNEAVNQWLAQVGGNFAALGQSGDVGLTASLRQLWLLTYREAQTQTYGDTFLMIMVCFGI 508

Query: 121 AIVLIPLMHKVAPPKAPSADAH 142
           A  ++PLM KV PP APSADAH
Sbjct: 509 ATAMVPLMRKVQPPAAPSADAH 530


>ref|YP_608292.1| EmrB/QacA family drug resistance transporter [Pseudomonas
           entomophila L48]
 emb|CAK15494.1| putative drug resistance transporter, EmrB/QacA family [Pseudomonas
           entomophila L48]
          Length = 521

 Score =  190 bits (482), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 96/142 (67%), Positives = 104/142 (73%)

Query: 1   VAPVVTLTLGALKPERLKQASGLFNLMRNLGGAIGIAVCGTILNDRTNLHFLRLAEHLNS 60
           V P VTLTLGAL P RLK ASGLFNLMRNLGGAIGIA C T+LNDRTNLHFLRLAEHLN 
Sbjct: 380 VPPTVTLTLGALSPARLKLASGLFNLMRNLGGAIGIAACATVLNDRTNLHFLRLAEHLNV 439

Query: 61  ANESMNNLLQNTGANMLAWGLDGGSAPTGALQQLWKLTMREAQTQTFADAFLAVMACFLV 120
            NE MN  L+    N  A GL    A   AL+QLW LT REAQT T+ADAF  +M CF V
Sbjct: 440 RNEGMNAWLEQLTGNAQALGLGSLDASQAALRQLWALTWREAQTLTYADAFRVIMLCFAV 499

Query: 121 AIVLIPLMHKVAPPKAPSADAH 142
           A +L+PLM KV PP+ PS DAH
Sbjct: 500 ATLLVPLMRKVQPPRQPSTDAH 521


>ref|YP_841292.1| major facilitator superfamily transporter DHA2 family protein
           [Ralstonia eutropha H16]
 emb|CAJ96562.1| MFS transporter, DHA2 family [Ralstonia eutropha H16]
          Length = 532

 Score =  189 bits (480), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 95/142 (66%), Positives = 105/142 (73%)

Query: 1   VAPVVTLTLGALKPERLKQASGLFNLMRNLGGAIGIAVCGTILNDRTNLHFLRLAEHLNS 60
           VAP VTLTLG+L PERLK ASGLFNLMRNLGGAIGIA C T LN+R NLHFLR AEHLN 
Sbjct: 391 VAPTVTLTLGSLPPERLKLASGLFNLMRNLGGAIGIAACATALNNRGNLHFLREAEHLNI 450

Query: 61  ANESMNNLLQNTGANMLAWGLDGGSAPTGALQQLWKLTMREAQTQTFADAFLAVMACFLV 120
            NE+M NLLQ      +A G D   A T AL+QLW L  REAQTQTF D FL ++ CF +
Sbjct: 451 RNEAMGNLLQGISDQFVAVGHDALDAQTAALRQLWGLAWREAQTQTFGDIFLLILVCFAI 510

Query: 121 AIVLIPLMHKVAPPKAPSADAH 142
           A  ++PLM KVA PK PSADAH
Sbjct: 511 ATAMVPLMRKVAAPKGPSADAH 532


>ref|YP_002502512.1| EmrB/QacA subfamily drug resistance transporter [Methylobacterium
           nodulans ORS 2060]
 gb|ACL62209.1| drug resistance transporter, EmrB/QacA subfamily [Methylobacterium
           nodulans ORS 2060]
          Length = 543

 Score =  187 bits (476), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 95/142 (66%), Positives = 104/142 (73%)

Query: 1   VAPVVTLTLGALKPERLKQASGLFNLMRNLGGAIGIAVCGTILNDRTNLHFLRLAEHLNS 60
           VAP VTLTLG L P +LK ASGLFNLMRNLGGAIGIA CGTILNDRTNLHFLRLAEHL +
Sbjct: 402 VAPTVTLTLGGLPPAKLKLASGLFNLMRNLGGAIGIAACGTILNDRTNLHFLRLAEHLTA 461

Query: 61  ANESMNNLLQNTGANMLAWGLDGGSAPTGALQQLWKLTMREAQTQTFADAFLAVMACFLV 120
           AN SM + L    A       D        L+QLW LT REAQT T+ADAFLA+ ACF +
Sbjct: 462 ANASMTDALGRISARATIVLGDAAHGQAAGLRQLWSLTYREAQTMTYADAFLAIAACFAL 521

Query: 121 AIVLIPLMHKVAPPKAPSADAH 142
           A  L+PLM KVAPP+ PSADAH
Sbjct: 522 ATALVPLMRKVAPPQGPSADAH 543