BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0162.p (133 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777993.1| hypothetical protein Hsero_4619 [Herbaspiril... 191 4e-47 ref|ZP_07795654.1| hypothetical protein PA39016_002040011 [Pseud... 169 9e-41 ref|YP_002442698.1| hypothetical protein PLES_51191 [Pseudomonas... 167 4e-40 ref|YP_793198.1| hypothetical protein PA14_62640 [Pseudomonas ae... 167 5e-40 ref|NP_253422.1| hypothetical protein PA4734 [Pseudomonas aerugi... 167 5e-40 >ref|YP_003777993.1| hypothetical protein Hsero_4619 [Herbaspirillum seropedicae SmR1] gb|ADJ66085.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 315 Score = 191 bits (484), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 95/125 (76%), Positives = 102/125 (81%) Query: 1 MEALRTRIEASVISISRPPGSPDFRLPKGDPGLFGPDSACWQVHSDFTSMLIGGIGALLL 60 ME LR RIEA+V+SISR PGS DF P GDPGLFGPDSA WQVHSDFT+ML GG+ ALLL Sbjct: 24 MEFLRQRIEATVLSISRGPGSADFLQPPGDPGLFGPDSAAWQVHSDFTAMLTGGVAALLL 83 Query: 61 QMLHPLPLAGVWDHSTFQQDMLGRLRGTAQFIAGTTFGSSADAARLIERVRRIHAGVRAR 120 QMLHPLPLAGVWDHS FQ DMLGRLR TAQF+AGTTFGS ADA RLI RV++IH GV Sbjct: 84 QMLHPLPLAGVWDHSNFQADMLGRLRRTAQFVAGTTFGSRADAERLIARVKQIHLGVNGV 143 Query: 121 RTDAR 125 D R Sbjct: 144 AADGR 148 >ref|ZP_07795654.1| hypothetical protein PA39016_002040011 [Pseudomonas aeruginosa 39016] gb|EFQ40750.1| hypothetical protein PA39016_002040011 [Pseudomonas aeruginosa 39016] dbj|BAK87688.1| hypothetical protein NCGM2_0805 [Pseudomonas aeruginosa NCGM2.S1] Length = 293 Score = 169 bits (429), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 82/118 (69%), Positives = 96/118 (81%), Gaps = 1/118 (0%) Query: 1 MEALRTRIEASVISIS-RPPGSPDFRLPKGDPGLFGPDSACWQVHSDFTSMLIGGIGALL 59 ME++R IE+ V+S++ G DF LPKGDPGLFGPD+ACW+VH DF+SM+IGGIGALL Sbjct: 1 MESVRRHIESQVLSLTGLAVGGVDFELPKGDPGLFGPDAACWKVHGDFSSMMIGGIGALL 60 Query: 60 LQMLHPLPLAGVWDHSTFQQDMLGRLRGTAQFIAGTTFGSSADAARLIERVRRIHAGV 117 LQMLHPL LAGVWDHS F+ D+LGRLR T QFI+ TT+G ADA RLIERVRRIH V Sbjct: 61 LQMLHPLALAGVWDHSNFRDDLLGRLRRTGQFISATTYGPLADAERLIERVRRIHESV 118 >ref|YP_002442698.1| hypothetical protein PLES_51191 [Pseudomonas aeruginosa LESB58] emb|CAW29873.1| hypothetical protein PLES_51191 [Pseudomonas aeruginosa LESB58] dbj|GAA20809.1| hypothetical protein NCGM1179_5678 [Pseudomonas aeruginosa NCMG1179] Length = 293 Score = 167 bits (424), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 81/118 (68%), Positives = 96/118 (81%), Gaps = 1/118 (0%) Query: 1 MEALRTRIEASVISIS-RPPGSPDFRLPKGDPGLFGPDSACWQVHSDFTSMLIGGIGALL 59 ME++R IE+ V+S++ G DF PKGDPGLFGPD+ACW+VH DF+SM+IGGIGALL Sbjct: 1 MESVRRHIESQVLSLTGLAVGGVDFESPKGDPGLFGPDAACWKVHGDFSSMMIGGIGALL 60 Query: 60 LQMLHPLPLAGVWDHSTFQQDMLGRLRGTAQFIAGTTFGSSADAARLIERVRRIHAGV 117 LQMLHPL LAGVWDHS+F+ D+LGRLR T QFI+ TT+G ADA RLIERVRRIH V Sbjct: 61 LQMLHPLALAGVWDHSSFRDDLLGRLRRTGQFISATTYGPLADAERLIERVRRIHESV 118 >ref|YP_793198.1| hypothetical protein PA14_62640 [Pseudomonas aeruginosa UCBPP-PA14] ref|ZP_06881035.1| hypothetical protein PaerPAb_25558 [Pseudomonas aeruginosa PAb1] gb|ABJ14117.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14] gb|EGM22961.1| hypothetical protein PA15_06300 [Pseudomonas aeruginosa 152504] Length = 293 Score = 167 bits (423), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 81/118 (68%), Positives = 95/118 (80%), Gaps = 1/118 (0%) Query: 1 MEALRTRIEASVISIS-RPPGSPDFRLPKGDPGLFGPDSACWQVHSDFTSMLIGGIGALL 59 ME++R IE+ V+S++ G DF PKGDPGLFGPD+ACW+VH DF+SM+IGGIGALL Sbjct: 1 MESVRRHIESQVLSLTGLAVGGVDFESPKGDPGLFGPDAACWKVHGDFSSMMIGGIGALL 60 Query: 60 LQMLHPLPLAGVWDHSTFQQDMLGRLRGTAQFIAGTTFGSSADAARLIERVRRIHAGV 117 LQMLHPL LAGVWDHS F+ D+LGRLR T QFI+ TT+G ADA RLIERVRRIH V Sbjct: 61 LQMLHPLALAGVWDHSNFRDDLLGRLRRTGQFISATTYGPLADAERLIERVRRIHESV 118 >ref|NP_253422.1| hypothetical protein PA4734 [Pseudomonas aeruginosa PAO1] ref|ZP_04931852.1| hypothetical protein PACG_04681 [Pseudomonas aeruginosa C3719] ref|ZP_04937686.1| hypothetical protein PA2G_05218 [Pseudomonas aeruginosa 2192] gb|AAG08120.1|AE004887_4 hypothetical protein PA4734 [Pseudomonas aeruginosa PAO1] gb|EAZ55971.1| hypothetical protein PACG_04681 [Pseudomonas aeruginosa C3719] gb|EAZ61805.1| hypothetical protein PA2G_05218 [Pseudomonas aeruginosa 2192] gb|AEO77322.1| hypothetical protein PAM18_4842 [Pseudomonas aeruginosa M18] Length = 293 Score = 167 bits (423), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 81/118 (68%), Positives = 95/118 (80%), Gaps = 1/118 (0%) Query: 1 MEALRTRIEASVISIS-RPPGSPDFRLPKGDPGLFGPDSACWQVHSDFTSMLIGGIGALL 59 ME++R IE+ V+S++ G DF PKGDPGLFGPD+ACW+VH DF+SM+IGGIGALL Sbjct: 1 MESVRRHIESQVLSLTGLAVGGVDFESPKGDPGLFGPDAACWKVHGDFSSMMIGGIGALL 60 Query: 60 LQMLHPLPLAGVWDHSTFQQDMLGRLRGTAQFIAGTTFGSSADAARLIERVRRIHAGV 117 LQMLHPL LAGVWDHS F+ D+LGRLR T QFI+ TT+G ADA RLIERVRRIH V Sbjct: 61 LQMLHPLALAGVWDHSNFRDDLLGRLRRTGQFISATTYGPLADAERLIERVRRIHESV 118