BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0161.p (364 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777992.1| cation/multidrug efflux pump protein [Herbas... 631 e-179 ref|YP_004154177.1| acriflavin resistance protein [Variovorax pa... 579 e-163 ref|YP_001351710.1| AcrB/AcrD/AcrF family multidrug efflux prote... 530 e-148 ref|YP_001862596.1| acriflavin resistance protein [Burkholderia ... 521 e-145 ref|YP_002257070.1| transport protein [Ralstonia solanacearum IP... 516 e-144 >ref|YP_003777992.1| cation/multidrug efflux pump protein [Herbaspirillum seropedicae SmR1] gb|ADJ66084.1| cation/multidrug efflux pump protein [Herbaspirillum seropedicae SmR1] Length = 1063 Score = 631 bits (1628), Expect = e-179, Method: Compositional matrix adjust. Identities = 308/354 (87%), Positives = 337/354 (95%) Query: 1 MSMVELALRRPYTFIVMAMLIVLSTPLVLMKMATDIFPEINIPVISIIWNYNGLSAQEMG 60 M+MV LALRRPYTFIVMA+LIVL+TPL L MATDIFPEINIPV+SIIWNYNGLSAQEMG Sbjct: 1 MNMVALALRRPYTFIVMALLIVLATPLTLKNMATDIFPEINIPVVSIIWNYNGLSAQEMG 60 Query: 61 QRIASQNERGLTTVVSDIEHIESQSLAGVAVIKVFFQPTANIQNAIAQTVASVQSQLRQL 120 QRIA+QNERGLTTVVSDIEHIESQSLAGV+VIKVFFQP ANIQ AIAQ VASVQ+Q+RQL Sbjct: 61 QRIAAQNERGLTTVVSDIEHIESQSLAGVSVIKVFFQPKANIQTAIAQVVASVQTQVRQL 120 Query: 121 PPGITPPLVIKYSASSIPVMQLALSSPTLPEQSLFDAAINTLRPQLITIPGVAVPFPYGG 180 PPGITPPLVIKYSASSIPVMQLALSSPTLPEQ++FDAA+ TLRPQL+TIPGVAVP+PYGG Sbjct: 121 PPGITPPLVIKYSASSIPVMQLALSSPTLPEQTVFDAAVQTLRPQLVTIPGVAVPYPYGG 180 Query: 181 KTRLISVDLDTQALQARGLSPVDVVNAVNTQNLILPSGTAKFGGTEYTVKMNGSPEAVAG 240 K+RLISVDLDTQALQARGL+P+DVVNA+NTQNLILPSGTAKFG TEY+VK+NGSPEAVAG Sbjct: 181 KSRLISVDLDTQALQARGLAPIDVVNAINTQNLILPSGTAKFGATEYSVKINGSPEAVAG 240 Query: 241 LNDLPVRTSNGATTYLRDVAYVRDGFSPQTNVVRQDGVRGVLLSVLKNGGASTLDIVNNL 300 LN+LPVRT+NGAT YL+DVA VRDGFSPQTNVVRQDG RGVLLS+LKNGGASTLDIV+NL Sbjct: 241 LNELPVRTTNGATIYLKDVANVRDGFSPQTNVVRQDGARGVLLSILKNGGASTLDIVDNL 300 Query: 301 RALLPQAQQTMPSDVKITPLFDQSLFVKAAVKGVVAEALIAAGLTAAMVLLFLG 354 R LLP A QT+P D+KITPLFDQS+FVKAAV GV++EALIAAGLTAAMVLLFLG Sbjct: 301 RKLLPTAAQTLPEDIKITPLFDQSVFVKAAVTGVISEALIAAGLTAAMVLLFLG 354 >ref|YP_004154177.1| acriflavin resistance protein [Variovorax paradoxus EPS] gb|ADU36066.1| acriflavin resistance protein [Variovorax paradoxus EPS] Length = 1071 Score = 579 bits (1493), Expect = e-163, Method: Compositional matrix adjust. Identities = 290/352 (82%), Positives = 325/352 (92%) Query: 3 MVELALRRPYTFIVMAMLIVLSTPLVLMKMATDIFPEINIPVISIIWNYNGLSAQEMGQR 62 MV+LALRRPYTFIVMAMLIVL+TP VL +MATDIFPEINIPV+S+IWNY GL AQEMGQR Sbjct: 1 MVQLALRRPYTFIVMAMLIVLATPFVLARMATDIFPEINIPVVSVIWNYTGLPAQEMGQR 60 Query: 63 IASQNERGLTTVVSDIEHIESQSLAGVAVIKVFFQPTANIQNAIAQTVASVQSQLRQLPP 122 I+ Q ERGLTT VSDIEHIESQSLAGV++IKVFFQPTANI+ AI+Q VAS+Q+Q+RQLPP Sbjct: 61 ISGQVERGLTTTVSDIEHIESQSLAGVSIIKVFFQPTANIEMAISQVVASMQAQVRQLPP 120 Query: 123 GITPPLVIKYSASSIPVMQLALSSPTLPEQSLFDAAINTLRPQLITIPGVAVPFPYGGKT 182 GITPPLVIKYSASS+PV+QLALSSPT E SLFDA +N LRPQLIT+PG A+PFPYGGK Sbjct: 121 GITPPLVIKYSASSVPVIQLALSSPTRSENSLFDATVNQLRPQLITVPGAAIPFPYGGKN 180 Query: 183 RLISVDLDTQALQARGLSPVDVVNAVNTQNLILPSGTAKFGGTEYTVKMNGSPEAVAGLN 242 RLISVDLDTQA+QARGL+P DVVNA+NTQNLILPSGTAKFG TEY V+MNGSP+A+AGLN Sbjct: 181 RLISVDLDTQAMQARGLAPSDVVNAINTQNLILPSGTAKFGATEYGVRMNGSPDAIAGLN 240 Query: 243 DLPVRTSNGATTYLRDVAYVRDGFSPQTNVVRQDGVRGVLLSVLKNGGASTLDIVNNLRA 302 DLP+RT NGAT Y+RDVAYVRDGFSPQTN+VRQDGVRGVLLSVLKNGGASTLDIV N+RA Sbjct: 241 DLPIRTVNGATVYVRDVAYVRDGFSPQTNIVRQDGVRGVLLSVLKNGGASTLDIVANIRA 300 Query: 303 LLPQAQQTMPSDVKITPLFDQSLFVKAAVKGVVAEALIAAGLTAAMVLLFLG 354 +LP A Q+MP D+K+TPLFDQS+FVKAAVKGVV EA++AA LTAAMVLLFLG Sbjct: 301 MLPIATQSMPQDIKVTPLFDQSVFVKAAVKGVVFEAILAAALTAAMVLLFLG 352 >ref|YP_001351710.1| AcrB/AcrD/AcrF family multidrug efflux protein [Janthinobacterium sp. Marseille] gb|ABR89690.1| multidrug efflux pump, AcrB/AcrD/AcrF family [Janthinobacterium sp. Marseille] Length = 1067 Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust. Identities = 256/354 (72%), Positives = 306/354 (86%) Query: 1 MSMVELALRRPYTFIVMAMLIVLSTPLVLMKMATDIFPEINIPVISIIWNYNGLSAQEMG 60 M +V++ALRRPYTF+VMA+LI L+TP+ L +MATDI PEI+IPVISIIWNYNGLSAQEMG Sbjct: 1 MWIVKIALRRPYTFLVMALLIFLATPIALTRMATDILPEIDIPVISIIWNYNGLSAQEMG 60 Query: 61 QRIASQNERGLTTVVSDIEHIESQSLAGVAVIKVFFQPTANIQNAIAQTVASVQSQLRQL 120 QR+ + NER LTT V+DIEHIESQ+LAGVAVIKVFFQP A+IQ AIAQ + Q+ LRQ+ Sbjct: 61 QRVTAVNERVLTTTVNDIEHIESQTLAGVAVIKVFFQPDASIQTAIAQVTSVSQAILRQM 120 Query: 121 PPGITPPLVIKYSASSIPVMQLALSSPTLPEQSLFDAAINTLRPQLITIPGVAVPFPYGG 180 PPG+TPPL+IKYSASSIPVMQL LSSPT+ EQ LFD A+N+LR +L+TIPGVA+P+PYGG Sbjct: 121 PPGMTPPLIIKYSASSIPVMQLGLSSPTMSEQGLFDIALNSLRTKLVTIPGVAIPYPYGG 180 Query: 181 KTRLISVDLDTQALQARGLSPVDVVNAVNTQNLILPSGTAKFGGTEYTVKMNGSPEAVAG 240 K+R++SVDLD QALQ++GLSP D+VNAVN QNLILP GTAKFG TE+TV +NGSP + Sbjct: 181 KSRVVSVDLDAQALQSKGLSPTDIVNAVNAQNLILPGGTAKFGSTEFTVNINGSPRVLDE 240 Query: 241 LNDLPVRTSNGATTYLRDVAYVRDGFSPQTNVVRQDGVRGVLLSVLKNGGASTLDIVNNL 300 LNDLPVR+ NGATTYL +VA+VRDGF+PQTN+ RQDG RGVLLS+LKNGGASTL IV+++ Sbjct: 241 LNDLPVRSVNGATTYLGEVAHVRDGFTPQTNIARQDGQRGVLLSLLKNGGASTLAIVDSV 300 Query: 301 RALLPQAQQTMPSDVKITPLFDQSLFVKAAVKGVVAEALIAAGLTAAMVLLFLG 354 RA L T+P DVK+T LFDQS+FVKAA+ GV+ EALIAA LTA M+LLFLG Sbjct: 301 RASLDDILPTLPDDVKVTALFDQSVFVKAAISGVMHEALIAACLTATMILLFLG 354 >ref|YP_001862596.1| acriflavin resistance protein [Burkholderia phymatum STM815] gb|ACC75550.1| acriflavin resistance protein [Burkholderia phymatum STM815] Length = 1078 Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust. Identities = 263/354 (74%), Positives = 303/354 (85%) Query: 1 MSMVELALRRPYTFIVMAMLIVLSTPLVLMKMATDIFPEINIPVISIIWNYNGLSAQEMG 60 M +V LAL+RPYTFIVMA+LIVL+TP VL D+ PEINIPV+SIIWNY GLSAQ+M Sbjct: 1 MWIVNLALKRPYTFIVMAILIVLATPFVLFTTPVDVLPEINIPVVSIIWNYAGLSAQDMA 60 Query: 61 QRIASQNERGLTTVVSDIEHIESQSLAGVAVIKVFFQPTANIQNAIAQTVASVQSQLRQL 120 RI S NER LTT V+DIEHIESQSLAG+A+IK+F QP ANIQ AIAQTVA Q+QL+Q+ Sbjct: 61 NRITSVNERSLTTTVNDIEHIESQSLAGIAIIKLFLQPNANIQTAIAQTVAVEQAQLKQM 120 Query: 121 PPGITPPLVIKYSASSIPVMQLALSSPTLPEQSLFDAAINTLRPQLITIPGVAVPFPYGG 180 PPG TPPLVI YSASSIPV+QL LSSP L EQ L D A+N LRPQL+TIPG AVP+PYGG Sbjct: 121 PPGATPPLVISYSASSIPVIQLGLSSPRLSEQDLNDTALNFLRPQLVTIPGAAVPYPYGG 180 Query: 181 KTRLISVDLDTQALQARGLSPVDVVNAVNTQNLILPSGTAKFGGTEYTVKMNGSPEAVAG 240 K+RLISVDLDT+AL A+GL+P+DVVNAVN QNLILP+GTAK G EYTV MNGSP VAG Sbjct: 181 KSRLISVDLDTRALLAKGLTPLDVVNAVNAQNLILPTGTAKIGPREYTVNMNGSPTTVAG 240 Query: 241 LNDLPVRTSNGATTYLRDVAYVRDGFSPQTNVVRQDGVRGVLLSVLKNGGASTLDIVNNL 300 LND+PVRT NGATTYLR+VA+VRDGFSPQTN+VR++G RGVL+S+LK G ASTL IVN L Sbjct: 241 LNDIPVRTVNGATTYLREVAHVRDGFSPQTNIVRENGRRGVLISILKTGSASTLSIVNTL 300 Query: 301 RALLPQAQQTMPSDVKITPLFDQSLFVKAAVKGVVAEALIAAGLTAAMVLLFLG 354 R LLP AQ +PSD+K+TPLFDQS+FVKAA++GVV EA+IAA LTAAM+LLFLG Sbjct: 301 RDLLPNAQAALPSDLKVTPLFDQSVFVKAAIRGVVREAVIAAALTAAMILLFLG 354 >ref|YP_002257070.1| transport protein [Ralstonia solanacearum IPO1609] emb|CAQ58951.1| transport protein [Ralstonia solanacearum IPO1609] Length = 1068 Score = 516 bits (1328), Expect = e-144, Method: Compositional matrix adjust. Identities = 263/354 (74%), Positives = 302/354 (85%) Query: 1 MSMVELALRRPYTFIVMAMLIVLSTPLVLMKMATDIFPEINIPVISIIWNYNGLSAQEMG 60 M +V+LALRRP TFIV+A+LI+L+TP VLM+MATDIFPEI+IPV SIIWNYNGL A+EM Sbjct: 1 MWIVQLALRRPLTFIVLALLILLATPFVLMRMATDIFPEIDIPVCSIIWNYNGLPAKEMA 60 Query: 61 QRIASQNERGLTTVVSDIEHIESQSLAGVAVIKVFFQPTANIQNAIAQTVASVQSQLRQL 120 RI S ER LTT V+DIEHIESQSL GVA+IKVFFQPTANIQ A+AQ V+ Q+QLRQL Sbjct: 61 DRIVSVTERSLTTTVNDIEHIESQSLNGVAIIKVFFQPTANIQTALAQIVSVSQAQLRQL 120 Query: 121 PPGITPPLVIKYSASSIPVMQLALSSPTLPEQSLFDAAINTLRPQLITIPGVAVPFPYGG 180 PPGITPPLVIKYSASSIP++QL LSS TL EQ L DAA+N LRP+LIT+PG+AVPFPYGG Sbjct: 121 PPGITPPLVIKYSASSIPILQLGLSSTTLSEQELNDAALNFLRPRLITVPGIAVPFPYGG 180 Query: 181 KTRLISVDLDTQALQARGLSPVDVVNAVNTQNLILPSGTAKFGGTEYTVKMNGSPEAVAG 240 K+R I+VDLDTQ L A+GL+P D+VNAV+ QNLILP+GT K +EY V +NG+P +A Sbjct: 181 KSRQITVDLDTQKLLAQGLTPTDIVNAVSAQNLILPAGTQKIDASEYAVALNGTPGTIAQ 240 Query: 241 LNDLPVRTSNGATTYLRDVAYVRDGFSPQTNVVRQDGVRGVLLSVLKNGGASTLDIVNNL 300 LN +PVRTSNGAT L DVA VRDGFSPQTNVVRQDG RGVLLS+LKNGGASTLDIVNNL Sbjct: 241 LNAMPVRTSNGATLVLGDVANVRDGFSPQTNVVRQDGQRGVLLSILKNGGASTLDIVNNL 300 Query: 301 RALLPQAQQTMPSDVKITPLFDQSLFVKAAVKGVVAEALIAAGLTAAMVLLFLG 354 LLP A +P D+KITPLFDQSLFVKAA++GV+ EALIAA LTAAM+LLFLG Sbjct: 301 YKLLPVASAALPQDIKITPLFDQSLFVKAAIEGVIREALIAACLTAAMILLFLG 354