BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0155.p (480 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004752315.1| inner membrane component of tripartite multi... 860 0.0 ref|YP_003776658.1| multidrug resistance protein protein [Herbas... 818 0.0 ref|YP_003910794.1| drug resistance transporter EmrB/QacA subfam... 717 0.0 ref|YP_004847578.1| multidrug resistance protein B [Pseudogulben... 680 0.0 ref|NP_900378.1| multidrug resistance protein [Chromobacterium v... 677 0.0 >ref|YP_004752315.1| inner membrane component of tripartite multidrug resistance system [Collimonas fungivorans Ter331] gb|AEK61492.1| Inner membrane component of tripartite multidrug resistance system [Collimonas fungivorans Ter331] Length = 512 Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust. Identities = 412/480 (85%), Positives = 454/480 (94%) Query: 1 VLDTTIANVSVSTISGALGASSSQGTYVITSYAVAEAITVPLTGWLANRFGTVRVFITSM 60 VLDTTIANVSVSTISGALGASSSQGTYVITSYAVAEAITVPLTGWLANRFG VRVFITSM Sbjct: 33 VLDTTIANVSVSTISGALGASSSQGTYVITSYAVAEAITVPLTGWLANRFGAVRVFITSM 92 Query: 61 ILFGVFSALCGMANSLGMLIAFRVLQGLAGGPLMPLSQTLLLRIFPKEKAAAAVGLWAMT 120 ++FGVFSALCG+ANSLG+LIAFR+ QGLAGGPL+PLSQTLLLR+FPKEKA AVGLWAMT Sbjct: 93 VMFGVFSALCGLANSLGLLIAFRIFQGLAGGPLIPLSQTLLLRVFPKEKAPTAVGLWAMT 152 Query: 121 TLIAPIAGPILGGVLCDQYSWPYIFFINVPVALICGYMGWKMLKRYESPLLKLPIDKVGL 180 TLIAPIAGPILGGVLCDQYSWPYIF+INVPVALICGY+GWKM KRYES L+K+PIDKVG+ Sbjct: 153 TLIAPIAGPILGGVLCDQYSWPYIFYINVPVALICGYLGWKMFKRYESSLVKVPIDKVGM 212 Query: 181 ILMVIWVAALQLMLDEGKEKDWFASTEIVVLALIAAAGFIAFLIWELTERNPIVDLRVFR 240 LM++WVAALQLMLD+GKEKDWFAS EI+ LAL+A GFIAFLIWELTERNP+VDLRVFR Sbjct: 213 GLMIVWVAALQLMLDQGKEKDWFASPEIMALALVATIGFIAFLIWELTERNPVVDLRVFR 272 Query: 241 HRGYTASVTTICLAFGAFFGATVLTPLWLQGYMGYTATHSGETTALTGILAVLTAPFVAK 300 HRGY+ASV TICLAFGAFFGATVLTPLWLQGYMGYTATHSG+TTAL+GILAV+TAPFVAK Sbjct: 273 HRGYSASVITICLAFGAFFGATVLTPLWLQGYMGYTATHSGQTTALSGILAVMTAPFVAK 332 Query: 301 LSTRVDPRKLVFIGVMWLGAVTLFRSFNTTDMSNFQIGWPLLMLGIGLPLFFVPLTGLAL 360 LST+VDPRKLV +GV+WLG+VTL RSFN+TDM+ FQIGWPLL+ GIG+PLFFVPLTGLAL Sbjct: 333 LSTKVDPRKLVCLGVLWLGSVTLLRSFNSTDMTTFQIGWPLLLQGIGMPLFFVPLTGLAL 392 Query: 361 SSVEESETASAAGLMSFCRTMSGAIATSLVNTSWENKSIYYHAELAGMVDQFGDVSNTLA 420 SSV SETASAAGLMSFCRTMSGAIATSLVNTSWENK+IYYHAEL+G+VDQ G+ SNTL Sbjct: 393 SSVNFSETASAAGLMSFCRTMSGAIATSLVNTSWENKAIYYHAELSGLVDQAGNASNTLV 452 Query: 421 QAGMSLDQARANMEQMLQSQSIMLSTNHIFMMAAISFGLAAAAVWFAPKPKRVADTSAAH 480 Q+G+S +QAR ++EQ +QSQSIMLSTNHIFMMAA+SF LAA AVWFAPKPKR+ADTSAAH Sbjct: 453 QSGLSAEQARLSIEQTVQSQSIMLSTNHIFMMAALSFLLAATAVWFAPKPKRIADTSAAH 512 >ref|YP_003776658.1| multidrug resistance protein protein [Herbaspirillum seropedicae SmR1] gb|ADJ64750.1| multidrug resistance protein protein [Herbaspirillum seropedicae SmR1] Length = 525 Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust. Identities = 397/480 (82%), Positives = 440/480 (91%) Query: 1 VLDTTIANVSVSTISGALGASSSQGTYVITSYAVAEAITVPLTGWLANRFGTVRVFITSM 60 VLDTTIANVSVSTI+GALGAS+SQGTYVITSYAVAEAITVPLTGWLANRFGTVRVFI SM Sbjct: 46 VLDTTIANVSVSTIAGALGASTSQGTYVITSYAVAEAITVPLTGWLANRFGTVRVFILSM 105 Query: 61 ILFGVFSALCGMANSLGMLIAFRVLQGLAGGPLMPLSQTLLLRIFPKEKAAAAVGLWAMT 120 ++FG+FSALCGMANSLGMLIAFRVLQGLAGGPLMPLSQTLLLRIFPKEKA AAVGLWAMT Sbjct: 106 VMFGLFSALCGMANSLGMLIAFRVLQGLAGGPLMPLSQTLLLRIFPKEKAPAAVGLWAMT 165 Query: 121 TLIAPIAGPILGGVLCDQYSWPYIFFINVPVALICGYMGWKMLKRYESPLLKLPIDKVGL 180 TL+APIAGPILGGVLCDQYSWPYIF+INVPVALICGY+GW+MLKRYE+ + KLPID+VGL Sbjct: 166 TLVAPIAGPILGGVLCDQYSWPYIFWINVPVALICGYIGWRMLKRYETKMSKLPIDRVGL 225 Query: 181 ILMVIWVAALQLMLDEGKEKDWFASTEIVVLALIAAAGFIAFLIWELTERNPIVDLRVFR 240 +LMV+WVAALQLMLDEGKEKDWFASTEIV+LA+ A FIAFLIWELTERNPIVDLRVFR Sbjct: 226 VLMVVWVAALQLMLDEGKEKDWFASTEIVLLAVTAVVFFIAFLIWELTERNPIVDLRVFR 285 Query: 241 HRGYTASVTTICLAFGAFFGATVLTPLWLQGYMGYTATHSGETTALTGILAVLTAPFVAK 300 HRG+TASVTTICLAFGAFFG+ VLTPLWLQGYMGYTAT SG +ALTGILAV+TAP VAK Sbjct: 286 HRGFTASVTTICLAFGAFFGSVVLTPLWLQGYMGYTATWSGCISALTGILAVMTAPMVAK 345 Query: 301 LSTRVDPRKLVFIGVMWLGAVTLFRSFNTTDMSNFQIGWPLLMLGIGLPLFFVPLTGLAL 360 +ST +D RKLV IGV WLG +T R+FNTTDMS FQIGWPL + GIGLPLFFVPLTGLAL Sbjct: 346 MSTTIDARKLVCIGVTWLGFITFLRAFNTTDMSFFQIGWPLFLQGIGLPLFFVPLTGLAL 405 Query: 361 SSVEESETASAAGLMSFCRTMSGAIATSLVNTSWENKSIYYHAELAGMVDQFGDVSNTLA 420 SSV E ETASAAGLMSFCRTM+GAIATS+VNTSWEN + Y+HAEL+G+VD+ GD +T+ Sbjct: 406 SSVNEEETASAAGLMSFCRTMAGAIATSIVNTSWENDATYFHAELSGLVDRGGDAIHTMM 465 Query: 421 QAGMSLDQARANMEQMLQSQSIMLSTNHIFMMAAISFGLAAAAVWFAPKPKRVADTSAAH 480 +GMS +QA A++ Q +Q+Q++MLSTNHIFMMAA+SF LAA AVW APKP RVADTSAAH Sbjct: 466 ASGMSAEQATASLAQTVQNQAVMLSTNHIFMMAAVSFSLAALAVWLAPKPTRVADTSAAH 525 >ref|YP_003910794.1| drug resistance transporter EmrB/QacA subfamily [Burkholderia sp. CCGE1003] gb|ADN61503.1| drug resistance transporter, EmrB/QacA subfamily [Burkholderia sp. CCGE1003] Length = 513 Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/480 (72%), Positives = 407/480 (84%) Query: 1 VLDTTIANVSVSTISGALGASSSQGTYVITSYAVAEAITVPLTGWLANRFGTVRVFITSM 60 VLDTTIANVSV TI+GA+GASSSQGTYVITSYAVAEAITVPLTGWLA RFGTVRVFI S+ Sbjct: 34 VLDTTIANVSVPTIAGAMGASSSQGTYVITSYAVAEAITVPLTGWLAGRFGTVRVFIASL 93 Query: 61 ILFGVFSALCGMANSLGMLIAFRVLQGLAGGPLMPLSQTLLLRIFPKEKAAAAVGLWAMT 120 I+FGV SALCGMA SL ML+ FRV QGLAGGPLMPLSQTLLLRIFPKEKAAAA+GLW+MT Sbjct: 94 IMFGVCSALCGMATSLEMLVLFRVFQGLAGGPLMPLSQTLLLRIFPKEKAAAAIGLWSMT 153 Query: 121 TLIAPIAGPILGGVLCDQYSWPYIFFINVPVALICGYMGWKMLKRYESPLLKLPIDKVGL 180 TL+AP+ GPILGGV+CD+ W YIF+INVPVALICGY+GW++LKRYE+ L++LPID VGL Sbjct: 154 TLVAPVMGPILGGVICDRLHWAYIFYINVPVALICGYLGWRLLKRYETGLMRLPIDAVGL 213 Query: 181 ILMVIWVAALQLMLDEGKEKDWFASTEIVVLALIAAAGFIAFLIWELTERNPIVDLRVFR 240 L+V+WV ALQ+MLDEGK+ DWFASTEI VL +IAA GF +FLIWELTER+P+VDLRVFR Sbjct: 214 ALLVVWVGALQIMLDEGKDNDWFASTEIRVLGIIAAIGFASFLIWELTERHPVVDLRVFR 273 Query: 241 HRGYTASVTTICLAFGAFFGATVLTPLWLQGYMGYTATHSGETTALTGILAVLTAPFVAK 300 HRG++ASV TI LAFGAFFGATVLTPLWLQ YMGYTAT +G TA+TGILAV++AP A Sbjct: 274 HRGFSASVVTITLAFGAFFGATVLTPLWLQNYMGYTATWAGCATAMTGILAVISAPLAAN 333 Query: 301 LSTRVDPRKLVFIGVMWLGAVTLFRSFNTTDMSNFQIGWPLLMLGIGLPLFFVPLTGLAL 360 LS+R D R LVF GVMWLGA+TL R+ TDM+ +Q+ +PLL+ G+GLP FFVPLTGLAL Sbjct: 334 LSSRFDGRWLVFAGVMWLGAITLLRTHANTDMTFWQVAFPLLLQGVGLPFFFVPLTGLAL 393 Query: 361 SSVEESETASAAGLMSFCRTMSGAIATSLVNTSWENKSIYYHAELAGMVDQFGDVSNTLA 420 SSV+E ETASAAGLM+FCRT GAIATSLVNT WE+++ Y AEL+G+VDQ G S L Sbjct: 394 SSVDEPETASAAGLMNFCRTFGGAIATSLVNTGWEDRTKYDRAELSGLVDQAGHFSTMLK 453 Query: 421 QAGMSLDQARANMEQMLQSQSIMLSTNHIFMMAAISFGLAAAAVWFAPKPKRVADTSAAH 480 +G S QA+A + ++QSQ++ML+TN +F MA F AA AVW APKP RVADTS AH Sbjct: 454 SSGFSASQAQAQISDIVQSQAVMLATNQLFTMAGACFIFAALAVWLAPKPTRVADTSQAH 513 >ref|YP_004847578.1| multidrug resistance protein B [Pseudogulbenkiania sp. NH8B] dbj|BAK77164.1| multidrug resistance protein B [Pseudogulbenkiania sp. NH8B] Length = 512 Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust. Identities = 326/480 (67%), Positives = 392/480 (81%) Query: 1 VLDTTIANVSVSTISGALGASSSQGTYVITSYAVAEAITVPLTGWLANRFGTVRVFITSM 60 VLDTTIANVSV I+G L S+SQGTYVITSYAVAEAI VPLTGWLA RFGTVR+F+ SM Sbjct: 33 VLDTTIANVSVPNIAGGLAVSASQGTYVITSYAVAEAIIVPLTGWLAARFGTVRLFVVSM 92 Query: 61 ILFGVFSALCGMANSLGMLIAFRVLQGLAGGPLMPLSQTLLLRIFPKEKAAAAVGLWAMT 120 +LFG+FS LCG ANS+ +L+ FRVLQGLAGGPLMP+SQTLL +IFPK+KA AA+GLW+MT Sbjct: 93 LLFGLFSVLCGFANSIELLVLFRVLQGLAGGPLMPMSQTLLQQIFPKDKAGAAIGLWSMT 152 Query: 121 TLIAPIAGPILGGVLCDQYSWPYIFFINVPVALICGYMGWKMLKRYESPLLKLPIDKVGL 180 TL+API GPILGG LCDQ W +IFFIN P+A+ C Y GW+MLKR+E L+KLP+D VGL Sbjct: 153 TLVAPIMGPILGGYLCDQVGWSWIFFINAPLAIACSYFGWQMLKRFEGKLIKLPVDAVGL 212 Query: 181 ILMVIWVAALQLMLDEGKEKDWFASTEIVVLALIAAAGFIAFLIWELTERNPIVDLRVFR 240 L++ WVAALQLMLDEGK DWF+S EIV LA++A GF AF+IWE+T NPIV+LRVFR Sbjct: 213 ALLIAWVAALQLMLDEGKNLDWFSSPEIVALAIVAVIGFAAFMIWEMTASNPIVNLRVFR 272 Query: 241 HRGYTASVTTICLAFGAFFGATVLTPLWLQGYMGYTATHSGETTALTGILAVLTAPFVAK 300 HRGY ASV TI LAFG+FFGATVLTP WLQ YMGYTAT +G TA++GILAV+ AP A+ Sbjct: 273 HRGYWASVLTISLAFGSFFGATVLTPQWLQSYMGYTATQAGYATAMSGILAVIAAPIAAQ 332 Query: 301 LSTRVDPRKLVFIGVMWLGAVTLFRSFNTTDMSNFQIGWPLLMLGIGLPLFFVPLTGLAL 360 +ST++DPR LVF GVMWLG VTLFRSF T+DM +Q+ PLL G+G+P FFVPLTGLA+ Sbjct: 333 MSTKMDPRPLVFFGVMWLGGVTLFRSFGTSDMGFWQVALPLLFQGLGMPFFFVPLTGLAM 392 Query: 361 SSVEESETASAAGLMSFCRTMSGAIATSLVNTSWENKSIYYHAELAGMVDQFGDVSNTLA 420 +SVE E ASAAGLMSF RT+SGA ATSLV TSWE+K+ Y AEL+G +D G +L Sbjct: 393 ASVETEEMASAAGLMSFLRTLSGAFATSLVTTSWEDKASYNRAELSGFIDSTGQTLQSLT 452 Query: 421 QAGMSLDQARANMEQMLQSQSIMLSTNHIFMMAAISFGLAAAAVWFAPKPKRVADTSAAH 480 Q+GMS++ AR ++Q++QSQSIMLSTN IF ++ +SF +AA A+W AP+P +VADTS H Sbjct: 453 QSGMSVETARGMIDQLVQSQSIMLSTNQIFWLSGLSFVIAACAIWLAPRPTKVADTSNVH 512 >ref|NP_900378.1| multidrug resistance protein [Chromobacterium violaceum ATCC 12472] gb|AAQ58384.1| probable multidrug resistance protein [Chromobacterium violaceum ATCC 12472] Length = 514 Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/480 (69%), Positives = 392/480 (81%) Query: 1 VLDTTIANVSVSTISGALGASSSQGTYVITSYAVAEAITVPLTGWLANRFGTVRVFITSM 60 VLDTTIANVSV I+G L SSSQGTYVITSYAVAEAI VPLTGWLA RFGTVR+F+ SM Sbjct: 35 VLDTTIANVSVPNIAGGLAVSSSQGTYVITSYAVAEAIIVPLTGWLAARFGTVRLFVGSM 94 Query: 61 ILFGVFSALCGMANSLGMLIAFRVLQGLAGGPLMPLSQTLLLRIFPKEKAAAAVGLWAMT 120 +LFG+FS LCG+A SL L+ FRVLQGLAGGPLMP+SQTLLL+IFP++KA AA+GLW+MT Sbjct: 95 LLFGLFSMLCGLAGSLETLVLFRVLQGLAGGPLMPMSQTLLLQIFPRQKAGAAIGLWSMT 154 Query: 121 TLIAPIAGPILGGVLCDQYSWPYIFFINVPVALICGYMGWKMLKRYESPLLKLPIDKVGL 180 TL+API GPILGG LCDQ SWP+IF+INVP+AL CG +GW++LKRY+S KL ID GL Sbjct: 155 TLVAPIMGPILGGTLCDQASWPWIFYINVPIALGCGLLGWRLLKRYQSQTAKLRIDAAGL 214 Query: 181 ILMVIWVAALQLMLDEGKEKDWFASTEIVVLALIAAAGFIAFLIWELTERNPIVDLRVFR 240 L+V+WV ALQLMLD+GKE DWF S IV LA+ A GF AFLIWELTE PIVDLRVFR Sbjct: 215 ALLVLWVGALQLMLDKGKELDWFGSPLIVGLAIAAVIGFAAFLIWELTEAQPIVDLRVFR 274 Query: 241 HRGYTASVTTICLAFGAFFGATVLTPLWLQGYMGYTATHSGETTALTGILAVLTAPFVAK 300 HRG+ ASV TI LAFG+FFGATVLTP WLQ YMGYTAT +G TA++G+LAV+ AP A+ Sbjct: 275 HRGFWASVLTISLAFGSFFGATVLTPQWLQAYMGYTATQAGYATAMSGVLAVMAAPIAAQ 334 Query: 301 LSTRVDPRKLVFIGVMWLGAVTLFRSFNTTDMSNFQIGWPLLMLGIGLPLFFVPLTGLAL 360 LS+R+DPRKLVF GVMWLG VTL+RSF+TTDM +Q+ PLL G+G+P FFVPLTGLAL Sbjct: 335 LSSRLDPRKLVFCGVMWLGCVTLYRSFSTTDMGFWQVALPLLFQGLGMPFFFVPLTGLAL 394 Query: 361 SSVEESETASAAGLMSFCRTMSGAIATSLVNTSWENKSIYYHAELAGMVDQFGDVSNTLA 420 +SVE +E ASAAGLMSF RT+SGA ATSLV T+W++K+ Y HAELAGMVD GD L+ Sbjct: 395 ASVEPAEVASAAGLMSFMRTLSGAFATSLVTTAWDDKASYNHAELAGMVDGGGDALRALS 454 Query: 421 QAGMSLDQARANMEQMLQSQSIMLSTNHIFMMAAISFGLAAAAVWFAPKPKRVADTSAAH 480 G+S A +EQ LQ+QS+MLSTN IF +A +SF +AA A+W AP+P RVADTS AH Sbjct: 455 AGGLSDGAAWGVIEQTLQAQSVMLSTNQIFWLAGLSFVVAACAIWLAPRPSRVADTSQAH 514