BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0150.p (517 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777989.1| methyl-accepting chemotaxis protein I [Herba... 653 0.0 ref|YP_003776130.1| methyl-accepting chemotaxis transmembrane I ... 598 e-169 ref|YP_004751579.1| methyl-accepting chemotaxis sensory transduc... 571 e-161 ref|YP_003774566.1| methyl-accepting chemotaxis transducer trans... 567 e-159 ref|YP_003777116.1| methyl-accepting chemotaxis protein [Herbasp... 550 e-154 >ref|YP_003777989.1| methyl-accepting chemotaxis protein I [Herbaspirillum seropedicae SmR1] gb|ADJ66081.1| methyl-accepting chemotaxis protein I, serine sensor receptor protein [Herbaspirillum seropedicae SmR1] Length = 516 Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust. Identities = 357/509 (70%), Positives = 423/509 (83%) Query: 9 KIAKKLVLSFLAVIILTAGLGAFSIVELIKVNRASSDIATNWMPSVKVGLQLQASMSRFR 68 KIAKKL++SF AVI+LT LG F+I EL VN+AS+D+ATNW+P++K +QAS+ R R Sbjct: 8 KIAKKLIVSFAAVIVLTVILGLFAIRELKAVNQASTDMATNWLPTIKAAQSIQASLPRMR 67 Query: 69 ISELQHILATEEKDYDDAEKAMKTRMEIIRKDLASYEQMISEPEEKVLYPQFQQTMQKYL 128 ISELQ + A + +DA KA+K+R++I+ K A+YE ISE EEKVLY +F ++ YL Sbjct: 68 ISELQMVTAATPAEREDALKAIKSRLDILAKQRAAYEAQISEAEEKVLYEKFSKSFATYL 127 Query: 129 AENKKIMELSRANQKDEARLQFKGESNKLFRQAVEQLGGLVKINDDGTVRSNAEADHTFN 188 +K++ +S +++EAR FKG+SNK FR +E + ++K+ND G+ RS+ A+ + Sbjct: 128 EIDKELARISAEGKEEEARALFKGDSNKTFRSMIENMDEIIKVNDAGSKRSDDMAEQVYR 187 Query: 189 EARNWILGLLIAIVVIAMTLAVWVARIVSVPLNKAVDVAQRVAEGDLGADIRSDSRDETG 248 A WI+GLL AIVVIA+ LAV VAR VS PLN+AV VA+RVA+GDL DIR+ S DETG Sbjct: 188 SATLWIIGLLAAIVVIALGLAVMVARAVSRPLNEAVAVAERVAQGDLTMDIRATSTDETG 247 Query: 249 QLMDSLKAMNDSLLRIVGEVRTGTDTIATASTEIASGNLDLSSRTEQQAGSLEETASAME 308 LM SL+AMNDSL +IVGEVRTGTDTI TAS EIA+GNLDLSSRTE+QAGSLEETASAME Sbjct: 248 MLMHSLRAMNDSLQQIVGEVRTGTDTITTASQEIATGNLDLSSRTEEQAGSLEETASAME 307 Query: 309 ELTSTVKANADNARQANQLAVSASEVAQQGGAVVGQVVDTMGSINESSRKIVDIISVIDG 368 ELT+TVK NADNARQANQLA SAS++A QGGAVVGQVV TM I ESS +I DIISVIDG Sbjct: 308 ELTATVKQNADNARQANQLAASASDIATQGGAVVGQVVQTMEGITESSNRIADIISVIDG 367 Query: 369 IAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAAAAKEIKVLIDDSVEKVGS 428 IAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSA+AAKEIK LIDDSVEKVG+ Sbjct: 368 IAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSASAAKEIKQLIDDSVEKVGA 427 Query: 429 GSKLVEQAGVTMSEVVASVRRVTDIVGEISAASTEQSTGIEEVNRAITQMDEVTQQNAAL 488 GS+LVE+AG TMSEVVASVRRVTD+V EISAAS EQSTGIEE+NRAITQMDEVTQQNAAL Sbjct: 428 GSQLVERAGATMSEVVASVRRVTDVVAEISAASNEQSTGIEEINRAITQMDEVTQQNAAL 487 Query: 489 VEQAAAAAQSLQEQAGKLAQVVSVFKLRR 517 VE+AAAAAQSLQ+QA +L+QVVSVFKL+R Sbjct: 488 VEEAAAAAQSLQDQAARLSQVVSVFKLQR 516 >ref|YP_003776130.1| methyl-accepting chemotaxis transmembrane I protein [Herbaspirillum seropedicae SmR1] gb|ADJ64222.1| methyl-accepting chemotaxis transmembrane I protein [Herbaspirillum seropedicae SmR1] Length = 579 Score = 598 bits (1543), Expect = e-169, Method: Compositional matrix adjust. Identities = 331/507 (65%), Positives = 402/507 (79%) Query: 9 KIAKKLVLSFLAVIILTAGLGAFSIVELIKVNRASSDIATNWMPSVKVGLQLQASMSRFR 68 +I++KL+ +FL V+ + A LG FSI +L +VN AS++I+TNW+PS++ +LQ +MSR R Sbjct: 8 RISRKLITTFLVVVAMVAALGVFSIRQLDQVNSASTEISTNWLPSIRTLARLQLAMSRLR 67 Query: 69 ISELQHILATEEKDYDDAEKAMKTRMEIIRKDLASYEQMISEPEEKVLYPQFQQTMQKYL 128 ELQHILA + K+Y++ E+ M+ +M ++ A Y ISEPEEK +YP+ ++ + ++ Sbjct: 68 SFELQHILAKDAKEYEEVERGMQVQMNNLKTAQAEYVTQISEPEEKAIYPEVEKLIATFV 127 Query: 129 AENKKIMELSRANQKDEARLQFKGESNKLFRQAVEQLGGLVKINDDGTVRSNAEADHTFN 188 +E+ KI+ LSR + +EAR +GES K +R +++Q+ L +ND G SN +AD + Sbjct: 128 SEHDKIIALSRQGKDEEARNLQRGESTKAYRTSLQQIDKLAAVNDKGADISNKQADAIYA 187 Query: 189 EARNWILGLLIAIVVIAMTLAVWVARIVSVPLNKAVDVAQRVAEGDLGADIRSDSRDETG 248 +AR WI+ + A + +AM LAVWV+R+++ PL +AV VAQRVA GDL I +DETG Sbjct: 188 QARLWIIVTVAACIGLAMLLAVWVSRLIARPLEEAVSVAQRVAGGDLTTRIEPAGKDETG 247 Query: 249 QLMDSLKAMNDSLLRIVGEVRTGTDTIATASTEIASGNLDLSSRTEQQAGSLEETASAME 308 QL+ +LK+MNDSL+ IVG+VR GT TI TASTEIASGNLDLSSRTE+QA SLEETASAME Sbjct: 248 QLLVALKSMNDSLVGIVGQVRMGTQTITTASTEIASGNLDLSSRTEEQASSLEETASAME 307 Query: 309 ELTSTVKANADNARQANQLAVSASEVAQQGGAVVGQVVDTMGSINESSRKIVDIISVIDG 368 ELTSTVK NADNARQANQLAVSASEVA QGGAVV QVVDTMGSIN SSRKI DII VIDG Sbjct: 308 ELTSTVKQNADNARQANQLAVSASEVASQGGAVVNQVVDTMGSINASSRKIADIIGVIDG 367 Query: 369 IAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAAAAKEIKVLIDDSVEKVGS 428 IAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSA AAKEIK LI+ SV +V Sbjct: 368 IAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAGAAKEIKELIEGSVAQVDM 427 Query: 429 GSKLVEQAGVTMSEVVASVRRVTDIVGEISAASTEQSTGIEEVNRAITQMDEVTQQNAAL 488 GSKLVE+AG+TMSEVV SVRRVTDIVGEIS+AS EQS GIE+VN AI QMDEVTQQNAAL Sbjct: 428 GSKLVERAGITMSEVVQSVRRVTDIVGEISSASQEQSEGIEQVNLAIAQMDEVTQQNAAL 487 Query: 489 VEQAAAAAQSLQEQAGKLAQVVSVFKL 515 VE+AAAAAQSLQEQA L Q V FKL Sbjct: 488 VEEAAAAAQSLQEQAETLTQTVGFFKL 514 >ref|YP_004751579.1| methyl-accepting chemotaxis sensory transducer [Collimonas fungivorans Ter331] gb|AEK60756.1| methyl-accepting chemotaxis sensory transducer [Collimonas fungivorans Ter331] Length = 635 Score = 571 bits (1472), Expect = e-161, Method: Compositional matrix adjust. Identities = 311/509 (61%), Positives = 402/509 (78%), Gaps = 1/509 (0%) Query: 9 KIAKKLVLSFLAVIILTAGLGAFSIVELIKVNRASSDIATNWMPSVKVGLQLQASMSRFR 68 KIA KL+LSF +++LT LG SI +L +VN +++I +NW+PSV++ L L+++++ R Sbjct: 103 KIATKLLLSFALILMLTLVLGVASITQLGQVNATTNEINSNWLPSVRMLLTLKSNLALLR 162 Query: 69 ISELQHILATEEKDYDDAEKAMKTRMEIIRKDLASYEQMISEPEEKVLYPQFQQTMQKYL 128 E+QH+++ + D D + + + ++K L+ Y ++SE EE+ +Y Q + + +YL Sbjct: 163 NVEMQHVMSNDAADMDKSAQFIGDIRGDVQKTLSEYAPLVSE-EERAVYDQLKDKIPRYL 221 Query: 129 AENKKIMELSRANQKDEARLQFKGESNKLFRQAVEQLGGLVKINDDGTVRSNAEADHTFN 188 +KKI+++SRA +KD+A + +G+S + +Q+ LVKIN DG+ S + + +N Sbjct: 222 EMDKKIVDISRAFRKDDAIKEIRGDSLAAIVELDKQVERLVKINSDGSAASAKDGEAIYN 281 Query: 189 EARNWILGLLIAIVVIAMTLAVWVARIVSVPLNKAVDVAQRVAEGDLGADIRSDSRDETG 248 +AR W++GL+IA++++ LA+W+AR+V+ PL AVDVA+RVA GDL ADI S DETG Sbjct: 282 KARFWMIGLMIAMLLLGFALALWIARVVAQPLEFAVDVARRVAGGDLTADIEVRSSDETG 341 Query: 249 QLMDSLKAMNDSLLRIVGEVRTGTDTIATASTEIASGNLDLSSRTEQQAGSLEETASAME 308 QLM +LK MN SL +IVGEVR+GTDTIATAS +IA+GN +LS RTEQQA SLEETA++ME Sbjct: 342 QLMQALKDMNHSLQKIVGEVRSGTDTIATASGQIAAGNQNLSQRTEQQASSLEETAASME 401 Query: 309 ELTSTVKANADNARQANQLAVSASEVAQQGGAVVGQVVDTMGSINESSRKIVDIISVIDG 368 +LTSTVK NADNA QANQLAVSASEVA GG VV QVV TMG+IN SS+KIVDII VIDG Sbjct: 402 QLTSTVKQNADNASQANQLAVSASEVALHGGTVVTQVVSTMGAINTSSKKIVDIIGVIDG 461 Query: 369 IAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAAAAKEIKVLIDDSVEKVGS 428 IAFQTNILALNAAVEAARAGEQGRGFAVVA+EVRSLAQRSAAAAKEIK LIDDSVEKVG Sbjct: 462 IAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRSLAQRSAAAAKEIKGLIDDSVEKVGL 521 Query: 429 GSKLVEQAGVTMSEVVASVRRVTDIVGEISAASTEQSTGIEEVNRAITQMDEVTQQNAAL 488 G++LV+QAG TM E+VASVRRVTDI+GEI+AAS EQ+ GIE++N+AI+QMD+VTQQNAAL Sbjct: 522 GTRLVDQAGSTMEEIVASVRRVTDIMGEITAASQEQTAGIEQINQAISQMDQVTQQNAAL 581 Query: 489 VEQAAAAAQSLQEQAGKLAQVVSVFKLRR 517 VE+AAAAA SLQ+QAG LA VV FKL R Sbjct: 582 VEEAAAAAASLQDQAGALAGVVGAFKLER 610 >ref|YP_003774566.1| methyl-accepting chemotaxis transducer transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ62658.1| methyl-accepting chemotaxis transducer transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 515 Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust. Identities = 320/506 (63%), Positives = 380/506 (75%) Query: 10 IAKKLVLSFLAVIILTAGLGAFSIVELIKVNRASSDIATNWMPSVKVGLQLQASMSRFRI 69 IAKKL LSF VI LT G F+I EL +VN+AS +I + WMP++ +LQ S+ R+ Sbjct: 9 IAKKLALSFAVVIALTLLQGLFAIKELKQVNKASGEIVSKWMPTMDAARELQGSLPPLRL 68 Query: 70 SELQHILATEEKDYDDAEKAMKTRMEIIRKDLASYEQMISEPEEKVLYPQFQQTMQKYLA 129 +EL+ + A ++ A KA+K R++ + + A +EQ +SEP+EK Y QF + + Y+ Sbjct: 69 NELELVTAVTPQERAAANKAIKDRLDALTRQRAIFEQRMSEPQEKEQYAQFLKNLTAYVK 128 Query: 130 ENKKIMELSRANQKDEARLQFKGESNKLFRQAVEQLGGLVKINDDGTVRSNAEADHTFNE 189 ++++ E++ Q DE R F G+S KL+R V L +VKIN G+ +++ EA F Sbjct: 129 VDEQLAEMAANQQYDETRALFNGDSAKLYRSMVGNLDAIVKINTSGSAQADEEASTVFRG 188 Query: 190 ARNWILGLLIAIVVIAMTLAVWVARIVSVPLNKAVDVAQRVAEGDLGADIRSDSRDETGQ 249 A+ WI+GLL A V+IA LA VA VS PL +AV +AQRVA GDL IR RDETG Sbjct: 189 AQRWIVGLLAATVLIASLLAFLVATNVSRPLKEAVQIAQRVARGDLTLRIRPAGRDETGA 248 Query: 250 LMDSLKAMNDSLLRIVGEVRTGTDTIATASTEIASGNLDLSSRTEQQAGSLEETASAMEE 309 LM++L+AMN+SL IV EVR GTDTI TAS EIA GNLDLS+RTEQQAGSLEETASAMEE Sbjct: 249 LMEALRAMNESLRDIVSEVRQGTDTITTASHEIARGNLDLSNRTEQQAGSLEETASAMEE 308 Query: 310 LTSTVKANADNARQANQLAVSASEVAQQGGAVVGQVVDTMGSINESSRKIVDIISVIDGI 369 LTSTV NADNARQANQLA +AS++A QGG VVGQVV TM I ESSR+I DIISVIDGI Sbjct: 309 LTSTVTQNADNARQANQLAATASDIASQGGEVVGQVVQTMEGITESSRRIADIISVIDGI 368 Query: 370 AFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAAAAKEIKVLIDDSVEKVGSG 429 AFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSA AAKEIK LIDDSV+KV +G Sbjct: 369 AFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAGAAKEIKELIDDSVQKVSAG 428 Query: 430 SKLVEQAGVTMSEVVASVRRVTDIVGEISAASTEQSTGIEEVNRAITQMDEVTQQNAALV 489 S LVE+AG TM+EVVASVRRVTD+V EISAA+ EQS GI EVN AITQMDE TQQNAALV Sbjct: 429 SALVERAGSTMTEVVASVRRVTDVVAEISAATQEQSGGINEVNLAITQMDETTQQNAALV 488 Query: 490 EQAAAAAQSLQEQAGKLAQVVSVFKL 515 EQAAAAA SL+ QA LA VV FKL Sbjct: 489 EQAAAAADSLKGQASNLAAVVGKFKL 514 >ref|YP_003777116.1| methyl-accepting chemotaxis protein [Herbaspirillum seropedicae SmR1] gb|ADJ65208.1| methyl-accepting chemotaxis protein [Herbaspirillum seropedicae SmR1] Length = 571 Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust. Identities = 300/507 (59%), Positives = 391/507 (77%) Query: 9 KIAKKLVLSFLAVIILTAGLGAFSIVELIKVNRASSDIATNWMPSVKVGLQLQASMSRFR 68 KIA KL +FL V++ GLG FS +EL VN++S+DIA NW+PS+ ++ +++R R Sbjct: 8 KIAHKLNAAFLVVLVFIIGLGGFSSLELAAVNKSSTDIARNWLPSIDALSKMSLALARSR 67 Query: 69 ISELQHILATEEKDYDDAEKAMKTRMEIIRKDLASYEQMISEPEEKVLYPQFQQTMQKYL 128 ++Q +L ++++ + + +M + K++A Y +++SEP EK LYP+ ++ + Y Sbjct: 68 SFDMQQLLTADKQEEKASRERADKQMATLLKEVARYGKLVSEPREKELYPEIERNIALYK 127 Query: 129 AENKKIMELSRANQKDEARLQFKGESNKLFRQAVEQLGGLVKINDDGTVRSNAEADHTFN 188 ++++ L +QK A S ++R+ EQ+G L ++N G S+A+ADH + Sbjct: 128 EAHERMSALFEQDQKQAAHALMNSTSTPVYRKLQEQIGELSEVNSKGAALSDADADHIYG 187 Query: 189 EARNWILGLLIAIVVIAMTLAVWVARIVSVPLNKAVDVAQRVAEGDLGADIRSDSRDETG 248 +A IL L+ VV+AM L+ W+AR+V+ PL AVD+A++VA GDL ADI + RDETG Sbjct: 188 QANMAILALVTTCVVLAMALSWWIARLVARPLANAVDIARQVAAGDLTADIPTAHRDETG 247 Query: 249 QLMDSLKAMNDSLLRIVGEVRTGTDTIATASTEIASGNLDLSSRTEQQAGSLEETASAME 308 QL+++L+ MN +LL IV EVR GTDTI TAS EIA+GN+DLSSRTEQQAG+LEETASAME Sbjct: 248 QLLEALRQMNGNLLNIVREVRQGTDTITTASAEIATGNMDLSSRTEQQAGALEETASAME 307 Query: 309 ELTSTVKANADNARQANQLAVSASEVAQQGGAVVGQVVDTMGSINESSRKIVDIISVIDG 368 ELTSTV+ N+DNARQANQLAV+ASEVAQ GG VVG+VV TM +IN+SSRKIVDII VIDG Sbjct: 308 ELTSTVRQNSDNARQANQLAVNASEVAQAGGTVVGKVVATMSAINDSSRKIVDIIGVIDG 367 Query: 369 IAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAAAAKEIKVLIDDSVEKVGS 428 IAFQTNILALNAAVEAARAGEQGRGFAVVASEVR+LAQRSAAAA EIK LIDDSV KV + Sbjct: 368 IAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAAAAHEIKALIDDSVAKVDT 427 Query: 429 GSKLVEQAGVTMSEVVASVRRVTDIVGEISAASTEQSTGIEEVNRAITQMDEVTQQNAAL 488 GSKLV++AG TM+EVVASV+RV+DIV EI+AA EQ+ GIE++N A+ QMDE TQQNAAL Sbjct: 428 GSKLVDEAGQTMNEVVASVKRVSDIVAEITAAGAEQTQGIEQINNAVVQMDENTQQNAAL 487 Query: 489 VEQAAAAAQSLQEQAGKLAQVVSVFKL 515 VEQAAAAA++LQEQAG+L++ VSVF+L Sbjct: 488 VEQAAAAAKALQEQAGRLSETVSVFRL 514