BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0129.p (254 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773691.1| enoyl-CoA hydratase [Herbaspirillum seropedi... 419 e-115 ref|YP_004751195.1| enoyl-CoA hydratase [Collimonas fungivorans ... 370 e-100 ref|YP_004684332.1| enoyl-CoA hydratase/carnithine racemase PaaG... 360 8e-98 ref|YP_001856627.1| enoyl-CoA hydratase [Burkholderia phymatum S... 360 9e-98 ref|YP_582544.1| enoyl-CoA hydratase [Cupriavidus metallidurans ... 352 3e-95 >ref|YP_003773691.1| enoyl-CoA hydratase [Herbaspirillum seropedicae SmR1] gb|ADJ61783.1| enoyl-CoA hydratase protein [Herbaspirillum seropedicae SmR1] Length = 256 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 212/254 (83%), Positives = 237/254 (93%) Query: 1 MEIELTKSNGVLTIAFNREEKKNAITAAMYQQLADALKDAETDNAVRAILFTGKPQIFTA 60 M+I+L+K++GVLTI F+RE+KKNAITAAMYQQLADALK+AE+D+AVRAILFTGKP+ F+A Sbjct: 3 MDIQLSKADGVLTIHFDREDKKNAITAAMYQQLADALKEAESDSAVRAILFTGKPKAFSA 62 Query: 61 GNDLEDFLKNPPSSKDAPVFQFLWEISHVSKPIVAAVSGAAVGIGTTLLLHCDLVYAADN 120 GNDLEDFLKNPP ++DAPVFQFLW+ISH SKPIVAAVSG AVGIGTTLLLHCDLVYAADN Sbjct: 63 GNDLEDFLKNPPKTQDAPVFQFLWQISHASKPIVAAVSGVAVGIGTTLLLHCDLVYAADN 122 Query: 121 AKFSMPFTQLGLCPEAASSLLLPHIAGYQRAAEKLLLGEAFDAAEAHAMGIVNRVLTVEE 180 AKFSMPFTQLGLCPEAASSLLLPHIAGYQRAAEKLLLGEAF A EA MG VNRV+ EE Sbjct: 123 AKFSMPFTQLGLCPEAASSLLLPHIAGYQRAAEKLLLGEAFGADEACQMGFVNRVMAQEE 182 Query: 181 LQPFAQKQAAKLAALPASSVRITKQLMKKNRVAATEAQMAAEIEHFAKMLTAPEAKEAFT 240 L P+AQ+QAAKLAALPA+S+R+TKQLMKKNRV ATE QM AEIEHF++MLTAPEAKEAFT Sbjct: 183 LLPYAQQQAAKLAALPAASIRVTKQLMKKNRVTATEQQMVAEIEHFSRMLTAPEAKEAFT 242 Query: 241 AFFEKRRPDFSKFA 254 AFFEKR+PDF +FA Sbjct: 243 AFFEKRKPDFKQFA 256 >ref|YP_004751195.1| enoyl-CoA hydratase [Collimonas fungivorans Ter331] gb|AEK60372.1| Enoyl-CoA hydratase [Collimonas fungivorans Ter331] Length = 254 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 195/254 (76%), Positives = 222/254 (87%) Query: 1 MEIELTKSNGVLTIAFNREEKKNAITAAMYQQLADALKDAETDNAVRAILFTGKPQIFTA 60 M+I +K NG+LTI FNR EKKNAITAAMYQ + DALKDAE+D+AVRAILFTGKPQIF+A Sbjct: 1 MDILTSKENGILTIEFNRLEKKNAITAAMYQTMVDALKDAESDSAVRAILFTGKPQIFSA 60 Query: 61 GNDLEDFLKNPPSSKDAPVFQFLWEISHVSKPIVAAVSGAAVGIGTTLLLHCDLVYAADN 120 GNDLEDF+KN P+ D+PVFQFLW+ISH SKP+VAAV+GAAVGIGTTLL+HCDLVYAADN Sbjct: 61 GNDLEDFMKNRPTGSDSPVFQFLWQISHASKPLVAAVAGAAVGIGTTLLMHCDLVYAADN 120 Query: 121 AKFSMPFTQLGLCPEAASSLLLPHIAGYQRAAEKLLLGEAFDAAEAHAMGIVNRVLTVEE 180 A+FSMPFTQLGLCPEAASSL+LP IAGYQRAAEKLLLGEAF A EA +MG+VN+VL EE Sbjct: 121 ARFSMPFTQLGLCPEAASSLILPQIAGYQRAAEKLLLGEAFTAEEAASMGLVNKVLPAEE 180 Query: 181 LQPFAQKQAAKLAALPASSVRITKQLMKKNRVAATEAQMAAEIEHFAKMLTAPEAKEAFT 240 L FAQ QAAKL ALPA+S+R+TK+LMK + A EA+MA EIEHF ML APEA EAFT Sbjct: 181 LLAFAQAQAAKLVALPAASIRVTKRLMKGGQTAEVEARMAQEIEHFGAMLAAPEAAEAFT 240 Query: 241 AFFEKRRPDFSKFA 254 AFFE+R+PDFSKF Sbjct: 241 AFFERRKPDFSKFC 254 >ref|YP_004684332.1| enoyl-CoA hydratase/carnithine racemase PaaG [Cupriavidus necator N-1] gb|AEI75851.1| enoyl-CoA hydratase/carnithine racemase PaaG [Cupriavidus necator N-1] Length = 258 Score = 360 bits (925), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 181/257 (70%), Positives = 206/257 (80%), Gaps = 4/257 (1%) Query: 1 MEIELTKSNGVLTIAFNREEKKNAITAAMYQQLADALKDAETDNAVRAILFTGKPQIFTA 60 M I G+LTI F+R +KKNAITAAMYQ +ADAL+ AETD VRAIL GKP+IFTA Sbjct: 1 MSIRTGIEQGILTIEFDRIDKKNAITAAMYQAMADALRAAETDRNVRAILLRGKPEIFTA 60 Query: 61 GNDLEDFLKNPPSSKD----APVFQFLWEISHVSKPIVAAVSGAAVGIGTTLLLHCDLVY 116 GNDLEDF++ PPS+ D APVFQFL++ISH +KPIVAAVSGAAVG+GTT+LLHCDLVY Sbjct: 61 GNDLEDFMQRPPSAGDGAEQAPVFQFLYQISHATKPIVAAVSGAAVGVGTTMLLHCDLVY 120 Query: 117 AADNAKFSMPFTQLGLCPEAASSLLLPHIAGYQRAAEKLLLGEAFDAAEAHAMGIVNRVL 176 A+D AK S+PF QLGLCPEAASSLLLP + GYQRAAEKLLLGEAF A EA +G+V RVL Sbjct: 121 ASDTAKLSLPFVQLGLCPEAASSLLLPRLVGYQRAAEKLLLGEAFSAQEALEIGLVTRVL 180 Query: 177 TVEELQPFAQKQAAKLAALPASSVRITKQLMKKNRVAATEAQMAAEIEHFAKMLTAPEAK 236 V EL FA +QA KLAALPASS+R TK+LMK VAA E QMA E F KML APEAK Sbjct: 181 PVAELHDFALQQARKLAALPASSLRETKRLMKAGDVAAVEKQMAEEGAVFRKMLVAPEAK 240 Query: 237 EAFTAFFEKRRPDFSKF 253 EAF AFF+KR+PDF+KF Sbjct: 241 EAFAAFFQKRKPDFTKF 257 >ref|YP_001856627.1| enoyl-CoA hydratase [Burkholderia phymatum STM815] gb|ACC69581.1| Enoyl-CoA hydratase/isomerase [Burkholderia phymatum STM815] Length = 254 Score = 360 bits (925), Expect = 9e-98, Method: Compositional matrix adjust. Identities = 176/254 (69%), Positives = 207/254 (81%) Query: 1 MEIELTKSNGVLTIAFNREEKKNAITAAMYQQLADALKDAETDNAVRAILFTGKPQIFTA 60 MEIELT++ VLTI FNR EKKNAITAAMYQ +ADAL +A+TD A+RA+L G+ IF+A Sbjct: 1 MEIELTRTLDVLTITFNRAEKKNAITAAMYQTMADALVEAQTDTAIRAVLLRGRAGIFSA 60 Query: 61 GNDLEDFLKNPPSSKDAPVFQFLWEISHVSKPIVAAVSGAAVGIGTTLLLHCDLVYAADN 120 GNDLEDF+K PP +DAPVFQFL IS V KP+VA+V+GAAVGIGTTLLLHCDLVYAAD+ Sbjct: 61 GNDLEDFMKQPPVGEDAPVFQFLRAISSVEKPLVASVAGAAVGIGTTLLLHCDLVYAADS 120 Query: 121 AKFSMPFTQLGLCPEAASSLLLPHIAGYQRAAEKLLLGEAFDAAEAHAMGIVNRVLTVEE 180 A FS+PF QLGLCPEAASSLLL +AGYQ AAEKL+LGE FDA EA+ MG VNR+L +E Sbjct: 121 ATFSLPFAQLGLCPEAASSLLLQRVAGYQVAAEKLMLGEPFDAKEAYRMGFVNRLLPADE 180 Query: 181 LQPFAQKQAAKLAALPASSVRITKQLMKKNRVAATEAQMAAEIEHFAKMLTAPEAKEAFT 240 + FA +QA KLAALPASS+R+TKQ+MK+ + QM E HFAKML APEAKEAF Sbjct: 181 VDAFALQQAQKLAALPASSLRVTKQMMKRAAQHEIQTQMTDEAVHFAKMLLAPEAKEAFK 240 Query: 241 AFFEKRRPDFSKFA 254 AFFEKR+PDF +F+ Sbjct: 241 AFFEKRKPDFRQFS 254 >ref|YP_582544.1| enoyl-CoA hydratase [Cupriavidus metallidurans CH34] gb|ABF07275.1| Enoyl-CoA hydratase/carnithine racemase [Cupriavidus metallidurans CH34] Length = 258 Score = 352 bits (903), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 175/258 (67%), Positives = 207/258 (80%), Gaps = 4/258 (1%) Query: 1 MEIELTKSNGVLTIAFNREEKKNAITAAMYQQLADALKDAETDNAVRAILFTGKPQIFTA 60 M I + GVLTI F+R +KKNAITAAMYQ +ADAL+ AETD AVR I+ GKP++FTA Sbjct: 1 MSIATSIDQGVLTIGFDRIDKKNAITAAMYQTMADALRAAETDAAVRVIVIEGKPEVFTA 60 Query: 61 GNDLEDFLKNPPSSK----DAPVFQFLWEISHVSKPIVAAVSGAAVGIGTTLLLHCDLVY 116 GND+EDFLK PP++ APVFQFL IS +KPIVA+VSGAAVGIGTTLLLHCDLVY Sbjct: 61 GNDIEDFLKRPPTNGADGAPAPVFQFLQAISRATKPIVASVSGAAVGIGTTLLLHCDLVY 120 Query: 117 AADNAKFSMPFTQLGLCPEAASSLLLPHIAGYQRAAEKLLLGEAFDAAEAHAMGIVNRVL 176 A++ AK ++PF QLGLCPEAASSLLLP + GYQRAAEKLLLGEAF A EA +G+V +VL Sbjct: 121 ASETAKLALPFAQLGLCPEAASSLLLPRMVGYQRAAEKLLLGEAFSAQEAFEIGLVTKVL 180 Query: 177 TVEELQPFAQKQAAKLAALPASSVRITKQLMKKNRVAATEAQMAAEIEHFAKMLTAPEAK 236 +V ELQ + ++QAAKLA LPASS+R TK+LMK + AA E +M E E F +ML APEAK Sbjct: 181 SVAELQGYVRQQAAKLAVLPASSLRETKRLMKGDDAAAVEKKMLEEGEVFRRMLVAPEAK 240 Query: 237 EAFTAFFEKRRPDFSKFA 254 EAFTAFFEKR+PDFSKF+ Sbjct: 241 EAFTAFFEKRKPDFSKFS 258