BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0115.p (243 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_776537.1| hypothetical protein Bamb_4653 [Burkholderia am... 370 e-101 ref|YP_003909630.1| hypothetical protein BC1003_4405 [Burkholder... 370 e-101 ref|ZP_02891122.1| conserved hypothetical protein [Burkholderia ... 370 e-100 ref|YP_622944.1| hypothetical protein Bcen_3075 [Burkholderia ce... 369 e-100 ref|ZP_02376445.1| hypothetical protein BuboB_01909 [Burkholderi... 368 e-100 >ref|YP_776537.1| hypothetical protein Bamb_4653 [Burkholderia ambifaria AMMD] gb|ABI90203.1| conserved hypothetical protein [Burkholderia ambifaria AMMD] Length = 263 Score = 370 bits (950), Expect = e-101, Method: Compositional matrix adjust. Identities = 170/235 (72%), Positives = 201/235 (85%) Query: 8 SNSIVRRVAALDWQDIATELNEYGCARLPGLLQEQECEALIADYARDELYRSRVIMARHG 67 S +V+RV+A+DW + TEL+ YGCAR+PGLL EC AL + Y+RD LYRSRV+MARHG Sbjct: 28 SVDLVQRVSAVDWTAVGTELDRYGCARVPGLLCTDECTALASLYSRDALYRSRVVMARHG 87 Query: 68 FGRGEYKYYSYPLPELIGALRSAFYARLAPQANRWNEAMGIDVRYPAAHDDFLARCHAAG 127 FGRGEY+Y++YPLP ++ LR+A Y LAP ANRWN+A+GIDVRYPA H FL RCHAAG Sbjct: 88 FGRGEYRYFAYPLPAVVDTLRTAIYPHLAPIANRWNQALGIDVRYPADHAAFLERCHAAG 147 Query: 128 QLRPTPLILKYESGDYNCLHQDLYGEHVFPIQMAILLSAPGRDFSGGEFVMTEQRPRMQS 187 Q RPTPLIL+Y DYNCLHQDLYGEHVFP+Q+AILLSAPGRDF+GGEFV+TEQRPRMQS Sbjct: 148 QTRPTPLILQYGPDDYNCLHQDLYGEHVFPLQVAILLSAPGRDFTGGEFVLTEQRPRMQS 207 Query: 188 RAEVVPLRQGDALLFAVNERPVAGTRGYYRVKMRHGVSRLRSGHRYTAGVIFHDA 242 RAEVVPL QGDA++FAV+ RPV GTRG YRV +RHGVSR+R+GHR+T G+IFHDA Sbjct: 208 RAEVVPLTQGDAVIFAVHGRPVQGTRGVYRVNLRHGVSRIRTGHRHTVGIIFHDA 262 >ref|YP_003909630.1| hypothetical protein BC1003_4405 [Burkholderia sp. CCGE1003] gb|ADN60339.1| Protein of unknown function DUF2086 [Burkholderia sp. CCGE1003] Length = 265 Score = 370 bits (950), Expect = e-101, Method: Compositional matrix adjust. Identities = 172/235 (73%), Positives = 199/235 (84%) Query: 8 SNSIVRRVAALDWQDIATELNEYGCARLPGLLQEQECEALIADYARDELYRSRVIMARHG 67 ++S+VRR+ A+DW ++ ELN YGCA L LL EC+AL A Y R+ELYRSRV+MARHG Sbjct: 30 ASSLVRRIEAIDWFNVEQELNGYGCAMLHELLTASECDALSALYPREELYRSRVVMARHG 89 Query: 68 FGRGEYKYYSYPLPELIGALRSAFYARLAPQANRWNEAMGIDVRYPAAHDDFLARCHAAG 127 FGRGEYKY++YPLP LI LR Y L P ANRWNEAMGID+RYPAAH +F+ARCHAAG Sbjct: 90 FGRGEYKYFAYPLPPLIAQLRGELYPHLVPVANRWNEAMGIDIRYPAAHAEFIARCHAAG 149 Query: 128 QLRPTPLILKYESGDYNCLHQDLYGEHVFPIQMAILLSAPGRDFSGGEFVMTEQRPRMQS 187 Q RPTPLIL+Y + DYNCLHQDLYGEHVFP+Q+AILLS PG DF+GGEFVMTEQRPRMQS Sbjct: 150 QTRPTPLILQYATDDYNCLHQDLYGEHVFPLQVAILLSEPGEDFTGGEFVMTEQRPRMQS 209 Query: 188 RAEVVPLRQGDALLFAVNERPVAGTRGYYRVKMRHGVSRLRSGHRYTAGVIFHDA 242 R EVVPLR+GDA++FAV++RPV GTRG YRV +RHGVSRLRSG R+T GVIFHDA Sbjct: 210 RTEVVPLRKGDAVVFAVHQRPVQGTRGAYRVNLRHGVSRLRSGRRHTLGVIFHDA 264 >ref|ZP_02891122.1| conserved hypothetical protein [Burkholderia ambifaria IOP40-10] gb|EDT03276.1| conserved hypothetical protein [Burkholderia ambifaria IOP40-10] Length = 247 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 170/238 (71%), Positives = 201/238 (84%) Query: 5 ANHSNSIVRRVAALDWQDIATELNEYGCARLPGLLQEQECEALIADYARDELYRSRVIMA 64 A S + +RV+A+DW + TEL+ YGCAR+PGLL EC AL + Y+RD LYRSRV+MA Sbjct: 9 AIESADLAQRVSAVDWTAVGTELDRYGCARVPGLLCADECTALASLYSRDALYRSRVVMA 68 Query: 65 RHGFGRGEYKYYSYPLPELIGALRSAFYARLAPQANRWNEAMGIDVRYPAAHDDFLARCH 124 RHGFGRGEY+Y++YPLP ++G LR+A Y LAP ANRWN+A+GIDVRYPA H FL RCH Sbjct: 69 RHGFGRGEYRYFAYPLPAVVGTLRTAIYPHLAPIANRWNQALGIDVRYPADHASFLERCH 128 Query: 125 AAGQLRPTPLILKYESGDYNCLHQDLYGEHVFPIQMAILLSAPGRDFSGGEFVMTEQRPR 184 AAGQ RPTPLIL+Y DYNCLHQDLYGEHVFP+Q+AILLS PGRDF+GGEFV+TEQRPR Sbjct: 129 AAGQTRPTPLILQYGPDDYNCLHQDLYGEHVFPLQVAILLSEPGRDFTGGEFVLTEQRPR 188 Query: 185 MQSRAEVVPLRQGDALLFAVNERPVAGTRGYYRVKMRHGVSRLRSGHRYTAGVIFHDA 242 MQSRAEVVPL QGDA++FAV+ RPV GTRG YRV +RHGVSR+R+GHR+T G+IFHDA Sbjct: 189 MQSRAEVVPLTQGDAVIFAVHGRPVQGTRGVYRVNLRHGVSRIRNGHRHTVGIIFHDA 246 >ref|YP_622944.1| hypothetical protein Bcen_3075 [Burkholderia cenocepacia AU 1054] ref|YP_838918.1| hypothetical protein Bcen2424_5292 [Burkholderia cenocepacia HI2424] gb|ABF77971.1| conserved hypothetical protein [Burkholderia cenocepacia AU 1054] gb|ABK12025.1| conserved hypothetical protein [Burkholderia cenocepacia HI2424] Length = 253 Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust. Identities = 171/238 (71%), Positives = 198/238 (83%) Query: 5 ANHSNSIVRRVAALDWQDIATELNEYGCARLPGLLQEQECEALIADYARDELYRSRVIMA 64 A S I +RV ALDW + EL+ +GCAR+PGL+ EC+AL + Y RD LYRSRV+MA Sbjct: 15 AVESLDIAQRVDALDWPSVDAELDRFGCARVPGLMSASECDALASLYPRDALYRSRVVMA 74 Query: 65 RHGFGRGEYKYYSYPLPELIGALRSAFYARLAPQANRWNEAMGIDVRYPAAHDDFLARCH 124 RHGFGRGEYKY++YPLP +I LR+ Y LAP ANRWN+A+GIDVRYP H FL RCH Sbjct: 75 RHGFGRGEYKYFAYPLPAIIAELRATMYPHLAPIANRWNQALGIDVRYPKDHATFLDRCH 134 Query: 125 AAGQLRPTPLILKYESGDYNCLHQDLYGEHVFPIQMAILLSAPGRDFSGGEFVMTEQRPR 184 AAGQ RPTPLIL+Y + DYNCLHQDLYGEHVFP+Q+AILLSAPGRDF+GGEFV+TEQRPR Sbjct: 135 AAGQTRPTPLILQYGADDYNCLHQDLYGEHVFPLQVAILLSAPGRDFTGGEFVLTEQRPR 194 Query: 185 MQSRAEVVPLRQGDALLFAVNERPVAGTRGYYRVKMRHGVSRLRSGHRYTAGVIFHDA 242 MQSRAEVVPL QGDA++FAV+ RPV GTRG YRV +RHGVSR+RSGHRYT G+IFHDA Sbjct: 195 MQSRAEVVPLTQGDAVIFAVHGRPVQGTRGIYRVNLRHGVSRIRSGHRYTVGIIFHDA 252 >ref|ZP_02376445.1| hypothetical protein BuboB_01909 [Burkholderia ubonensis Bu] Length = 262 Score = 368 bits (944), Expect = e-100, Method: Compositional matrix adjust. Identities = 171/232 (73%), Positives = 194/232 (83%) Query: 11 IVRRVAALDWQDIATELNEYGCARLPGLLQEQECEALIADYARDELYRSRVIMARHGFGR 70 IVR + LDW I EL GCA +PGLL C+AL + YARD LYRSRV+MARHGFGR Sbjct: 30 IVRHIDTLDWPAIEAELGRQGCALIPGLLSAPACDALASRYARDALYRSRVVMARHGFGR 89 Query: 71 GEYKYYSYPLPELIGALRSAFYARLAPQANRWNEAMGIDVRYPAAHDDFLARCHAAGQLR 130 GEYKY++YPLP + LRSA Y LAP ANRWN A+G+DVRYPAAH +FLARCHAAGQ R Sbjct: 90 GEYKYFAYPLPATVDTLRSALYPHLAPIANRWNAALGVDVRYPAAHSEFLARCHAAGQTR 149 Query: 131 PTPLILKYESGDYNCLHQDLYGEHVFPIQMAILLSAPGRDFSGGEFVMTEQRPRMQSRAE 190 PTPLIL+Y DYNCLHQDLYGEHVFP+Q+AILLSAPGRDF+GGEFV+TEQRPRMQSRAE Sbjct: 150 PTPLILQYGPDDYNCLHQDLYGEHVFPLQVAILLSAPGRDFTGGEFVLTEQRPRMQSRAE 209 Query: 191 VVPLRQGDALLFAVNERPVAGTRGYYRVKMRHGVSRLRSGHRYTAGVIFHDA 242 VVPL QGDA++FAV+ RPV GTRG YRV +RHGVSR+RSGHR+T G+IFHDA Sbjct: 210 VVPLTQGDAVIFAVHSRPVQGTRGVYRVNLRHGVSRIRSGHRHTVGIIFHDA 261