BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0107.p (249 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_237563.1| Beta-lactamase [Pseudomonas syringae pv. syring... 226 2e-57 gb|EGH69841.1| Beta-lactamase [Pseudomonas syringae pv. aceris s... 224 1e-56 gb|EGH09009.1| beta-lactamase [Pseudomonas syringae pv. morsprun... 224 1e-56 ref|ZP_06496436.1| Beta-lactamase [Pseudomonas syringae pv. syri... 223 3e-56 gb|EGH31112.1| Beta-lactamase [Pseudomonas syringae pv. japonica... 221 9e-56 >ref|YP_237563.1| Beta-lactamase [Pseudomonas syringae pv. syringae B728a] gb|AAY39525.1| Beta-lactamase [Pseudomonas syringae pv. syringae B728a] Length = 301 Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 117/212 (55%), Positives = 139/212 (65%) Query: 38 APWWSFTKTVLAAAAMSLVCDGQLTLDAPLPGKPYTLRQLLRHGAGVPNYSELGSYAQAV 97 APWWSFTKTVLAA A+SLV DG + LDAP+P +P+TLRQLLRH AG+ +Y EL Y AV Sbjct: 21 APWWSFTKTVLAATALSLVRDGLIGLDAPIPDQPFTLRQLLRHEAGLADYGELAEYHTAV 80 Query: 98 ARGDAPWPAEEMLARTDADTLLFAPDAGWRYSNTGYFLVRRLVENATGLSLQHALDQLVL 157 A GD WPA+EM+ R D L ++P GWRYSN GY + RL+E T L+L A+ Q L Sbjct: 81 ASGDPAWPADEMMRRLDGTRLRYSPGTGWRYSNLGYLFIGRLIERLTDLTLDDAVIQRAL 140 Query: 158 TPLGIRNVMLAQTPDDLAISVWGNARGYHPQWVYHGLLLGAPAAAALLLDRLLTTDFLPP 217 +PLGI NV A+T DL + G+ Y P WVYHGLL+G + AAL LDRLL D L Sbjct: 141 SPLGISNVRFAKTRADLQTTHQGSTSNYDPAWVYHGLLIGPISQAALFLDRLLCADLLST 200 Query: 218 ALLAEMLRKTPLGESLPGRPARNFGYGAGLMN 249 LL EM LG +PGRP GYG GLM Sbjct: 201 GLLQEMQTARTLGGPIPGRPWITPGYGLGLMQ 232 >gb|EGH69841.1| Beta-lactamase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 329 Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 116/212 (54%), Positives = 138/212 (65%) Query: 38 APWWSFTKTVLAAAAMSLVCDGQLTLDAPLPGKPYTLRQLLRHGAGVPNYSELGSYAQAV 97 APWWSFTKTVLAA A+SLV DG + LD P+P +P+TLRQLLRH AG+ +Y EL Y AV Sbjct: 21 APWWSFTKTVLAATALSLVRDGLIGLDDPIPDQPFTLRQLLRHEAGLADYGELAQYHTAV 80 Query: 98 ARGDAPWPAEEMLARTDADTLLFAPDAGWRYSNTGYFLVRRLVENATGLSLQHALDQLVL 157 A GD WPA+EM+ R D L ++P GWRYSN GY + RL+E T L+L A+ Q L Sbjct: 81 ASGDPAWPADEMMRRLDGTRLRYSPGTGWRYSNLGYLFIGRLIERLTDLTLDDAVIQRAL 140 Query: 158 TPLGIRNVMLAQTPDDLAISVWGNARGYHPQWVYHGLLLGAPAAAALLLDRLLTTDFLPP 217 +PLGI NV A+T DL + G+ Y P WVYHGLL+G + AAL LDRLL D L Sbjct: 141 SPLGISNVRFAKTRADLQTTHQGSTSNYDPAWVYHGLLIGPISQAALFLDRLLCADLLST 200 Query: 218 ALLAEMLRKTPLGESLPGRPARNFGYGAGLMN 249 LL EM LG +PGRP GYG GLM Sbjct: 201 GLLQEMQTARTLGGPIPGRPWITPGYGLGLMQ 232 >gb|EGH09009.1| beta-lactamase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 301 Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 120/229 (52%), Positives = 146/229 (63%) Query: 20 IAIVRDGQLVRGDLQASPAPWWSFTKTVLAAAAMSLVCDGQLTLDAPLPGKPYTLRQLLR 79 + + +GQ + + PWWSFTK+VLA AA+SLV DG + LD P+ P+TLRQLL+ Sbjct: 3 CSTILNGQHLPTEQSDVVVPWWSFTKSVLATAALSLVRDGLIQLDDPVKEGPFTLRQLLK 62 Query: 80 HGAGVPNYSELGSYAQAVARGDAPWPAEEMLARTDADTLLFAPDAGWRYSNTGYFLVRRL 139 H AG+ +YSEL Y AVA G PWPA EM+ R DA L +AP WRYSN GY LV RL Sbjct: 63 HQAGLADYSELPEYHAAVAEGHIPWPAAEMMQRLDATRLRYAPGTAWRYSNVGYLLVARL 122 Query: 140 VENATGLSLQHALDQLVLTPLGIRNVMLAQTPDDLAISVWGNARGYHPQWVYHGLLLGAP 199 +E TGLSL+ AL + VL PLG+ V A+T DLA N YHP WVYHGLL+G Sbjct: 123 IERVTGLSLEDALARRVLLPLGVTQVRFAKTRKDLAEVYPANLSSYHPGWVYHGLLVGPL 182 Query: 200 AAAALLLDRLLTTDFLPPALLAEMLRKTPLGESLPGRPARNFGYGAGLM 248 + +++LLDRLLT LP LL EM LG +PGRP GYG GLM Sbjct: 183 SESSMLLDRLLTGQLLPSTLLQEMQDAIVLGGPIPGRPWAAPGYGLGLM 231 >ref|ZP_06496436.1| Beta-lactamase [Pseudomonas syringae pv. syringae FF5] Length = 301 Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 117/230 (50%), Positives = 146/230 (63%) Query: 20 IAIVRDGQLVRGDLQASPAPWWSFTKTVLAAAAMSLVCDGQLTLDAPLPGKPYTLRQLLR 79 I++V +GQ D APWWSFTKTVLAA A+SLV DG + LD P+P +P+TLRQLLR Sbjct: 3 ISLVSNGQPQTPDRLELMAPWWSFTKTVLAATALSLVQDGLIGLDDPIPDQPFTLRQLLR 62 Query: 80 HGAGVPNYSELGSYAQAVARGDAPWPAEEMLARTDADTLLFAPDAGWRYSNTGYFLVRRL 139 H AG+ +Y EL Y AVA+G+ WPA+EM+ D L ++P GWRYSN GY + RL Sbjct: 63 HEAGLADYGELAEYHTAVAKGEPAWPADEMMRCLDGTRLRYSPGTGWRYSNVGYLFIGRL 122 Query: 140 VENATGLSLQHALDQLVLTPLGIRNVMLAQTPDDLAISVWGNARGYHPQWVYHGLLLGAP 199 +E T ++L A+ Q L PLGI NV A+T DL + G+ Y P WVYHGLL+G Sbjct: 123 IERLTDMTLDDAVIQRALAPLGISNVRFAKTRADLQATHLGSTSNYDPAWVYHGLLIGPI 182 Query: 200 AAAALLLDRLLTTDFLPPALLAEMLRKTPLGESLPGRPARNFGYGAGLMN 249 + AAL LDRLL+ + L LL EM LG +PGRP GYG GLM Sbjct: 183 SQAALFLDRLLSAELLCAGLLQEMQTARTLGGPIPGRPWITAGYGLGLMQ 232 >gb|EGH31112.1| Beta-lactamase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 254 Score = 221 bits (562), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 117/230 (50%), Positives = 146/230 (63%) Query: 20 IAIVRDGQLVRGDLQASPAPWWSFTKTVLAAAAMSLVCDGQLTLDAPLPGKPYTLRQLLR 79 I++V +GQ D APWWSFTKTVLAA A+SLV DG + LD P+P +P+TLRQLLR Sbjct: 3 ISLVSNGQPQTPDRLELMAPWWSFTKTVLAATALSLVQDGLIGLDDPIPDQPFTLRQLLR 62 Query: 80 HGAGVPNYSELGSYAQAVARGDAPWPAEEMLARTDADTLLFAPDAGWRYSNTGYFLVRRL 139 H AG+ +Y EL Y AVA+G+ WPA+EM+ D L ++P GWRYSN GY + RL Sbjct: 63 HEAGLADYGELAEYHTAVAKGEPAWPADEMMRCLDGTRLRYSPGTGWRYSNVGYLFIGRL 122 Query: 140 VENATGLSLQHALDQLVLTPLGIRNVMLAQTPDDLAISVWGNARGYHPQWVYHGLLLGAP 199 +E T ++L A+ Q L PLGI NV A+T DL + G+ Y P WVYHGLL+G Sbjct: 123 IERLTDMTLDDAVIQRALAPLGISNVRFAKTRADLQATHLGSTSNYDPAWVYHGLLIGPI 182 Query: 200 AAAALLLDRLLTTDFLPPALLAEMLRKTPLGESLPGRPARNFGYGAGLMN 249 + AAL LDRLL+ + L LL EM LG +PGRP GYG GLM Sbjct: 183 SQAALFLDRLLSAELLCAGLLQEMQTARTLGGPIPGRPWITPGYGLGLMQ 232