BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0090.p (317 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004751012.1| glutamate aspartate periplasmic binding prot... 531 e-149 ref|YP_004754627.1| glutamate aspartate periplasmic binding prot... 352 5e-95 ref|YP_003777243.1| glutamate/aspartate ABC transporter periplas... 345 8e-93 ref|ZP_08274376.1| Glutamate Aspartate periplasmic binding prote... 344 9e-93 ref|YP_004417946.1| amino-acid ABC transporter binding protein p... 293 4e-77 >ref|YP_004751012.1| glutamate aspartate periplasmic binding protein [Collimonas fungivorans Ter331] gb|AEK60189.1| Glutamate Aspartate periplasmic binding protein precursor [Collimonas fungivorans Ter331] Length = 302 Score = 531 bits (1368), Expect = e-149, Method: Compositional matrix adjust. Identities = 249/299 (83%), Positives = 276/299 (92%) Query: 19 AHAAPDEDLTGTLKKIKEKGVLVLGVRDSTKPFSYLNDKQSYEGYAVDLCLAIAKNIQRK 78 +HAA E+L+GTLKKIKEKG +VLGVRDSTKPFS+L DKQ YEGY++DLCL+I K IQRK Sbjct: 4 SHAAQGEELSGTLKKIKEKGTIVLGVRDSTKPFSFLTDKQDYEGYSIDLCLSIVKGIQRK 63 Query: 79 LGVSQLTISMLPVTSSSRIPLIQNGTVDIECGNTTNTAERQNIVEFSPTYYVSGSRILSK 138 LG+SQL ISMLPVT+SSRIPLIQNGTVDIECGNTTNTAERQNIVEFSPT+YVSGSRILSK Sbjct: 64 LGMSQLNISMLPVTASSRIPLIQNGTVDIECGNTTNTAERQNIVEFSPTFYVSGSRILSK 123 Query: 139 RSSNIKTLADLRGKKLAINSGTTHIKMVSTLNDEQKLGIDIIASRDTAEGMLLVETGRAA 198 RSSN++TLADLRGKKLAINSGTTHIKM+S LN EQKLGIDI+ SRDTAEG+LLVETGR A Sbjct: 124 RSSNVQTLADLRGKKLAINSGTTHIKMISILNSEQKLGIDIVTSRDTAEGVLLVETGRVA 183 Query: 199 AFINDDIVLASLAGGSKISSELVVGKEALSVEPFGLIYRKNDPAFKQIVDTSISTIFKSG 258 AF+NDDIVLASLAGGSK+ ELVV K+ALSVEPFGLIY K+DPAFKQ+VD+S++ IFKSG Sbjct: 184 AFVNDDIVLASLAGGSKMKDELVVSKDALSVEPFGLIYGKDDPAFKQVVDSSVTNIFKSG 243 Query: 259 DINKIYAKWFQSPALPHGQNLNWPMSPETQAAIAKITNSPNPADYAAIPKEQLSTIKKK 317 DI KIYAKWFQSPALPHGQNLNWPMSPETQAAIAK+TNS NP DYA +PKEQL+ KKK Sbjct: 244 DIKKIYAKWFQSPALPHGQNLNWPMSPETQAAIAKVTNSSNPTDYAPLPKEQLAVAKKK 302 >ref|YP_004754627.1| glutamate aspartate periplasmic binding protein gltI [Collimonas fungivorans Ter331] gb|AEK63804.1| Glutamate Aspartate periplasmic binding protein precursor gltI [Collimonas fungivorans Ter331] Length = 317 Score = 352 bits (903), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 168/306 (54%), Positives = 231/306 (75%), Gaps = 4/306 (1%) Query: 3 KIVMALCLMSSQVAHIAHAAPDEDLTGTLKKIKEKGVLVLGVRDSTKPFSYLNDKQSYEG 62 K+V+AL + V + ++LTGTLKKIK+ G + LGVRDS+ PFSYL+DKQSY+G Sbjct: 5 KLVVALLGLGVMVGSVQA----QELTGTLKKIKDTGTITLGVRDSSIPFSYLDDKQSYQG 60 Query: 63 YAVDLCLAIAKNIQRKLGVSQLTISMLPVTSSSRIPLIQNGTVDIECGNTTNTAERQNIV 122 Y++DLCL A IQ++LG++ L + M+PVTS++RIPLI NGT+D+ C + TN AERQ +V Sbjct: 61 YSIDLCLKAATAIQKQLGLTALNVKMVPVTSATRIPLISNGTIDLSCDSATNNAERQKVV 120 Query: 123 EFSPTYYVSGSRILSKRSSNIKTLADLRGKKLAINSGTTHIKMVSTLNDEQKLGIDIIAS 182 F+PT YV+ +RIL+K+SSNIKTL DL+GK + SGT+++K V+ LN E+ LG++I+A+ Sbjct: 121 SFAPTMYVTANRILAKKSSNIKTLDDLKGKTIVSTSGTSNLKQVTILNGERNLGMNILAA 180 Query: 183 RDTAEGMLLVETGRAAAFINDDIVLASLAGGSKISSELVVGKEALSVEPFGLIYRKNDPA 242 +D AE L+VETGRA AF+ DDI+LASLA S+ ++ + KEALSVEP+G+I RK+D Sbjct: 181 KDHAEAFLMVETGRATAFVMDDILLASLAASSRAPADYEITKEALSVEPYGIIERKDDLP 240 Query: 243 FKQIVDTSISTIFKSGDINKIYAKWFQSPALPHGQNLNWPMSPETQAAIAKITNSPNPAD 302 FK+ VDT++S ++ SG IN IYAKWF P G NLN P+SPE +AA AK T+S +PA Sbjct: 241 FKKAVDTALSNVYTSGQINDIYAKWFLKAIPPKGINLNVPISPELKAAFAKPTDSGDPAA 300 Query: 303 YAAIPK 308 YAA+P+ Sbjct: 301 YAAVPE 306 >ref|YP_003777243.1| glutamate/aspartate ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ65335.1| ABC-type glutamate/aspartate transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 315 Score = 345 bits (884), Expect = 8e-93, Method: Compositional matrix adjust. Identities = 172/314 (54%), Positives = 227/314 (72%), Gaps = 8/314 (2%) Query: 4 IVMALCLMSSQVAHIAHAAPDEDLTGTLKKIKEKGVLVLGVRDSTKPFSYLNDKQSYEGY 63 +V A LMSS HA E+ TG LKKIK+ G L LGVRDS+ PFSYL+DKQSY+GY Sbjct: 10 LVGASVLMSS-----VHA---EEFTGRLKKIKDSGTLTLGVRDSSIPFSYLDDKQSYQGY 61 Query: 64 AVDLCLAIAKNIQRKLGVSQLTISMLPVTSSSRIPLIQNGTVDIECGNTTNTAERQNIVE 123 ++DLCL A IQ+KLG++ L I M+PVTS++RIPLI NGT DI C + TN ER N V Sbjct: 62 SIDLCLKAATAIQKKLGLTSLNIKMVPVTSATRIPLIANGTTDISCDSATNNQERWNQVA 121 Query: 124 FSPTYYVSGSRILSKRSSNIKTLADLRGKKLAINSGTTHIKMVSTLNDEQKLGIDIIASR 183 FS T +V+ ++ LSK+++N+KTL DL+GK + SGT+++K ++ LN E+ LG++I+A++ Sbjct: 122 FSVTEFVTANKFLSKKAANLKTLEDLKGKTVVSTSGTSNLKQITALNAERNLGMNILAAK 181 Query: 184 DTAEGMLLVETGRAAAFINDDIVLASLAGGSKISSELVVGKEALSVEPFGLIYRKNDPAF 243 D AE L+VETGRAAAF+ DDI+L+SLA SK + V EALSVEP+GLI K D F Sbjct: 182 DHAEAFLMVETGRAAAFVMDDILLSSLAANSKAPGDYQVSSEALSVEPYGLILPKGDKEF 241 Query: 244 KQIVDTSISTIFKSGDINKIYAKWFQSPALPHGQNLNWPMSPETQAAIAKITNSPNPADY 303 K +VD +++ ++K DI KIYAKWFQSP P G NLN PMSP+ QA +AK T+S +PA Y Sbjct: 242 KTVVDDALTVVYKGDDIKKIYAKWFQSPIPPKGVNLNVPMSPQLQAVLAKPTDSYDPAAY 301 Query: 304 AAIPKEQLSTIKKK 317 A +P+ Q + KKK Sbjct: 302 AVVPEAQKNMGKKK 315 >ref|ZP_08274376.1| Glutamate Aspartate periplasmic binding protein precursor gltI [Oxalobacteraceae bacterium IMCC9480] gb|EGF32154.1| Glutamate Aspartate periplasmic binding protein precursor gltI [Oxalobacteraceae bacterium IMCC9480] Length = 313 Score = 344 bits (883), Expect = 9e-93, Method: Compositional matrix adjust. Identities = 168/316 (53%), Positives = 235/316 (74%), Gaps = 3/316 (0%) Query: 1 MKKIVMALCLMSSQVAHIAHAAPDEDLTGTLKKIKEKGVLVLGVRDSTKPFSYLNDKQSY 60 MK M L L+ S + IA AA ++ TGTLKKIK+ G + LGVRDS+ PFSYL+DKQSY Sbjct: 1 MKLAKMMLVLIGSGL--IASAAQAQE-TGTLKKIKDSGQITLGVRDSSIPFSYLDDKQSY 57 Query: 61 EGYAVDLCLAIAKNIQRKLGVSQLTISMLPVTSSSRIPLIQNGTVDIECGNTTNTAERQN 120 +GY++D+C+ I +IQ++LG++ L + + PVTS++RIPL+ NGTVD+ CG+ TN ERQ Sbjct: 58 QGYSIDICMKIVTSIQKELGMTSLNVKLNPVTSATRIPLMANGTVDLVCGSATNNIERQK 117 Query: 121 IVEFSPTYYVSGSRILSKRSSNIKTLADLRGKKLAINSGTTHIKMVSTLNDEQKLGIDII 180 V F+PT +V+ +R+L+K+SSNIKTL D++GK L SGT+++K + LN ++ LG++++ Sbjct: 118 QVSFAPTTFVTANRLLAKKSSNIKTLDDMKGKSLVSTSGTSNLKQLVQLNGDRNLGMNVM 177 Query: 181 ASRDTAEGMLLVETGRAAAFINDDIVLASLAGGSKISSELVVGKEALSVEPFGLIYRKND 240 ++D AE L+VETGRA AF DDI+LASLA SK ++ + EALS EP+G++ R+ D Sbjct: 178 TAKDHAEAFLMVETGRAVAFGMDDILLASLAASSKSPADYSITTEALSTEPYGIMLRRED 237 Query: 241 PAFKQIVDTSISTIFKSGDINKIYAKWFQSPALPHGQNLNWPMSPETQAAIAKITNSPNP 300 PAFK+ VDT++ +FKSGDIN+IYAKWFQSP P G NLN PMS + +A IA T+S +P Sbjct: 238 PAFKKSVDTAVINLFKSGDINRIYAKWFQSPIPPKGINLNIPMSDQLKAVIAHPTDSGDP 297 Query: 301 ADYAAIPKEQLSTIKK 316 A YAA+P+ Q + KK Sbjct: 298 AAYAAVPEAQKGSTKK 313 >ref|YP_004417946.1| amino-acid ABC transporter binding protein precursor [Pusillimonas sp. T7-7] gb|AEC21322.1| amino-acid ABC transporter binding protein precursor [Pusillimonas sp. T7-7] Length = 299 Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 134/275 (48%), Positives = 197/275 (71%) Query: 29 GTLKKIKEKGVLVLGVRDSTKPFSYLNDKQSYEGYAVDLCLAIAKNIQRKLGVSQLTISM 88 G L+KIK G + LG RDS+ PFSYL+DKQ GY++D+C I + ++ KLG+ +L + M Sbjct: 24 GRLEKIKSSGEIALGHRDSSIPFSYLDDKQQPIGYSMDICKNIVEAVKEKLGMDKLNVKM 83 Query: 89 LPVTSSSRIPLIQNGTVDIECGNTTNTAERQNIVEFSPTYYVSGSRILSKRSSNIKTLAD 148 +PVTSS+RIPL+ NGTVD+ CG++TNT ERQ V F+PT +V+ +R ++K+SSNI +L D Sbjct: 84 VPVTSSTRIPLLANGTVDLNCGSSTNTKERQAQVTFAPTTFVTATRFVAKKSSNINSLED 143 Query: 149 LRGKKLAINSGTTHIKMVSTLNDEQKLGIDIIASRDTAEGMLLVETGRAAAFINDDIVLA 208 L+GK + +GT++I+ + ND+QKLG++II ++D AE +L V GRAAAF DDI+LA Sbjct: 144 LKGKTVISTAGTSNIRWATGANDQQKLGMNIIPAKDHAEALLTVNNGRAAAFFMDDILLA 203 Query: 209 SLAGGSKISSELVVGKEALSVEPFGLIYRKNDPAFKQIVDTSISTIFKSGDINKIYAKWF 268 L S+ SE ++ K+A +VEP+ ++ K+DP FK++VD +I + K G + ++Y KWF Sbjct: 204 GLVATSRDPSEWMISKDAYTVEPYAIMEPKDDPEFKKVVDDTIKGMMKDGTLAELYKKWF 263 Query: 269 QSPALPHGQNLNWPMSPETQAAIAKITNSPNPADY 303 +SP P NLNWPMS + + +A T+SP+PA Y Sbjct: 264 ESPIPPKNVNLNWPMSEQLKKVVANPTDSPDPAAY 298