BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0086.p (539 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777815.1| chaperonin GroEL [Herbaspirillum seropedicae... 939 0.0 ref|YP_558394.1| chaperonin GroEL [Burkholderia xenovorans LB400... 910 0.0 ref|YP_001816085.1| chaperonin GroEL [Burkholderia ambifaria MC4... 907 0.0 ref|YP_004348777.1| Chaperonin GroEL2 [Burkholderia gladioli BSR... 904 0.0 ref|YP_778270.1| chaperonin GroEL [Burkholderia ambifaria AMMD] ... 904 0.0 >ref|YP_003777815.1| chaperonin GroEL [Herbaspirillum seropedicae SmR1] gb|ADJ65907.1| chaperonin GroEL protein [Herbaspirillum seropedicae SmR1] Length = 540 Score = 939 bits (2426), Expect = 0.0, Method: Compositional matrix adjust. Identities = 465/521 (89%), Positives = 503/521 (96%) Query: 1 MSAKDVQFHDNARARIVKGVNVLADAVKVTLGPKGRNVLLDRSFGAPIITKDGVSVAKEV 60 MSAK V+FHD ARARIVKGVNVLADAVKVTLGPKGRNVLLDRSFGAP+ITKDGVSVAKE+ Sbjct: 1 MSAKQVKFHDTARARIVKGVNVLADAVKVTLGPKGRNVLLDRSFGAPVITKDGVSVAKEI 60 Query: 61 ELKDRLENMGAQVVKQVASKTADVAGDGTTTATVLAQSIVQEGMKYVAAGMNPMDLKRGI 120 ELKDRLENMGAQVVKQVASKTADVAGDGTTTATVLAQSIVQEGMKYVAAGMNPMDLKRGI Sbjct: 61 ELKDRLENMGAQVVKQVASKTADVAGDGTTTATVLAQSIVQEGMKYVAAGMNPMDLKRGI 120 Query: 121 DKAVSAAIDELKKISRPITTNKEIAQVGSISANSDEAIGNIIAQAMERVGKEGVITVEDG 180 DKAV+AAIDEL+KISRPITTNKEIAQVG+ISANSDEAIGNIIAQAM++VGKEGVITVEDG Sbjct: 121 DKAVTAAIDELRKISRPITTNKEIAQVGAISANSDEAIGNIIAQAMDKVGKEGVITVEDG 180 Query: 181 KSLDNELDVVEGMQFDRGYLSPYFINDPDKQLAKLEDPLILLYDKKISNIRELLPILETS 240 KSL+NELDVVEGMQFDRGYLSPYFINDPDKQL +L+DPL+LLYDKKIS+IRELLP+LE + Sbjct: 181 KSLENELDVVEGMQFDRGYLSPYFINDPDKQLCQLDDPLVLLYDKKISSIRELLPVLEMT 240 Query: 241 AKAGKPLFIIAEDIEGEALATLVVNSVRGVLKVAAVKAPGFGDRRKAMLEDIAILTGATV 300 AKAGKPLFI+AEDI+GEALATLVVNSVRGVLKVAAVKAPGFGDRRKAMLED+A+LTG TV Sbjct: 241 AKAGKPLFIVAEDIDGEALATLVVNSVRGVLKVAAVKAPGFGDRRKAMLEDLAVLTGGTV 300 Query: 301 ISEETGHTLEKASLQELGSAKRIEVLKDVTTIIDGAGEQKKIDARVASIQTQIEQAASDY 360 ISEETG +LEK +L++LGSAKR+EV KD TT+IDGAG Q KIDARV +IQ QIE+ SDY Sbjct: 301 ISEETGKSLEKTALEDLGSAKRVEVRKDSTTVIDGAGAQDKIDARVKAIQAQIEETTSDY 360 Query: 361 DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALL 420 D+EKLQERVAKLAGGVAVIK+GAATEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALL Sbjct: 361 DREKLQERVAKLAGGVAVIKIGAATEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALL 420 Query: 421 RARAAISKLEGANADQNAGVQIVLRALEAPLRVIASNAGDEPSVVVAKVMAGKGDFGYNA 480 RARAAISKLEGANADQNAG+QIVLRALEAPLRVIA+NAGDEPSVVVAKV +GKG+FGYNA Sbjct: 421 RARAAISKLEGANADQNAGIQIVLRALEAPLRVIAANAGDEPSVVVAKVYSGKGNFGYNA 480 Query: 481 ATGEYGDLVKTGVIDPTKVTRTALQNAASIAALILTTDATV 521 A GEYGD+V+ GV+DPTKVTRTALQNAAS+A+LILTTDATV Sbjct: 481 ANGEYGDMVELGVVDPTKVTRTALQNAASVASLILTTDATV 521 >ref|YP_558394.1| chaperonin GroEL [Burkholderia xenovorans LB400] ref|YP_558424.1| chaperonin GroEL [Burkholderia xenovorans LB400] sp|Q13ZW7.1|CH602_BURXL RecName: Full=60 kDa chaperonin 2; AltName: Full=GroEL protein 2; AltName: Full=Protein Cpn60 2 gb|ABE30342.1| 60 kDa chaperonin (Cpn60), groEL [Burkholderia xenovorans LB400] gb|ABE30372.1| 60 kDa chaperonin (Cpn60), groEL [Burkholderia xenovorans LB400] Length = 540 Score = 910 bits (2351), Expect = 0.0, Method: Compositional matrix adjust. Identities = 455/540 (84%), Positives = 508/540 (94%), Gaps = 3/540 (0%) Query: 1 MSAKDVQFHDNARARIVKGVNVLADAVKVTLGPKGRNVLLDRSFGAPIITKDGVSVAKEV 60 MSAKDV+FHD+AR+RIVKGVNVLADAVKVTLGPKGRNVL++RSFGAP ITKDGVSVAKE+ Sbjct: 1 MSAKDVKFHDSARSRIVKGVNVLADAVKVTLGPKGRNVLIERSFGAPTITKDGVSVAKEI 60 Query: 61 ELKDRLENMGAQVVKQVASKTADVAGDGTTTATVLAQSIVQEGMKYVAAGMNPMDLKRGI 120 ELKDR ENMGAQVVKQVASKTADVAGDGTTTATVLAQSIVQEGMK+VAAGMNPMDLKRGI Sbjct: 61 ELKDRFENMGAQVVKQVASKTADVAGDGTTTATVLAQSIVQEGMKHVAAGMNPMDLKRGI 120 Query: 121 DKAVSAAIDELKKISRPITTNKEIAQVGSISANSDEAIGNIIAQAMERVGKEGVITVEDG 180 DKAV+A +DEL ++S+PI T++EIAQVG+ISAN+DEAIG IIA AM++VGKEGVITVEDG Sbjct: 121 DKAVAAVLDELHRLSKPIKTSREIAQVGAISANADEAIGKIIADAMDKVGKEGVITVEDG 180 Query: 181 KSLDNELDVVEGMQFDRGYLSPYFINDPDKQLAKLEDPLILLYDKKISNIRELLPILETS 240 KSL+NEL+VVEGMQFDRGYLSPYFINDPDKQ+A L+DPLILL+DKKIS+IR+LLP+LE + Sbjct: 181 KSLENELEVVEGMQFDRGYLSPYFINDPDKQVAHLDDPLILLHDKKISSIRDLLPVLEAA 240 Query: 241 AKAGKPLFIIAEDIEGEALATLVVNSVRGVLKVAAVKAPGFGDRRKAMLEDIAILTGATV 300 AKAGKPL IIAED+EGEAL TLVVNS+RGVLKVAAVKAPGFGDRRKA+LEDIAILTGATV Sbjct: 241 AKAGKPLLIIAEDVEGEALTTLVVNSMRGVLKVAAVKAPGFGDRRKALLEDIAILTGATV 300 Query: 301 ISEETGHTLEKASLQELGSAKRIEVLKDVTTIIDGAGEQKKIDARVASIQTQIEQAASDY 360 ISEETG LEKA+L+ELG AKR+EV K+ T IIDGAG+Q +IDARV +I+ QIE+A SDY Sbjct: 301 ISEETGKQLEKATLEELGRAKRVEVQKENTIIIDGAGDQTRIDARVKAIRAQIEEATSDY 360 Query: 361 DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALL 420 D+EKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALL Sbjct: 361 DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALL 420 Query: 421 RARAAISKLEGANADQNAGVQIVLRALEAPLRVIASNAGDEPSVVVAKVMAGKGDFGYNA 480 RAR+AIS L GANADQ+AG++IVLRALEAPLRVIA+NAGDEPSVVVAKV++GKG++GYNA Sbjct: 421 RARSAISSLTGANADQDAGIRIVLRALEAPLRVIAANAGDEPSVVVAKVLSGKGNYGYNA 480 Query: 481 ATGEYGDLVKTGVIDPTKVTRTALQNAASIAALILTTDATVSDAPVEEK---TPRTEPEY 537 ATGEYGDLV+TGV+DPTKVTRTALQNAASIA LILTTDATV++AP EEK P E EY Sbjct: 481 ATGEYGDLVETGVVDPTKVTRTALQNAASIAGLILTTDATVAEAPKEEKAVPAPAPELEY 540 >ref|YP_001816085.1| chaperonin GroEL [Burkholderia ambifaria MC40-6] gb|ACB68532.1| chaperonin GroEL [Burkholderia ambifaria MC40-6] Length = 540 Score = 907 bits (2345), Expect = 0.0, Method: Compositional matrix adjust. Identities = 452/540 (83%), Positives = 508/540 (94%), Gaps = 3/540 (0%) Query: 1 MSAKDVQFHDNARARIVKGVNVLADAVKVTLGPKGRNVLLDRSFGAPIITKDGVSVAKEV 60 MSAKDV+FHD+ARARIVKGVNVLADAVKVTLGPKGRNV+++RSFGAP ITKDGVSVAKE+ Sbjct: 1 MSAKDVKFHDSARARIVKGVNVLADAVKVTLGPKGRNVVIERSFGAPTITKDGVSVAKEI 60 Query: 61 ELKDRLENMGAQVVKQVASKTADVAGDGTTTATVLAQSIVQEGMKYVAAGMNPMDLKRGI 120 ELKDR ENMGAQ+VKQVASKTADVAGDGTTTATVLAQSIVQEGMK+VAAGMNPMDLKRGI Sbjct: 61 ELKDRFENMGAQIVKQVASKTADVAGDGTTTATVLAQSIVQEGMKHVAAGMNPMDLKRGI 120 Query: 121 DKAVSAAIDELKKISRPITTNKEIAQVGSISANSDEAIGNIIAQAMERVGKEGVITVEDG 180 DKAV+A +DEL+K+S+PI+TN+EIAQVGSISAN+DEAIG IIA AME+VGKEGVITVEDG Sbjct: 121 DKAVAAVLDELRKLSKPISTNREIAQVGSISANADEAIGKIIADAMEKVGKEGVITVEDG 180 Query: 181 KSLDNELDVVEGMQFDRGYLSPYFINDPDKQLAKLEDPLILLYDKKISNIRELLPILETS 240 KSL+NELDVVEGMQFDRGY+SPYFINDP+KQ A L+D LILL+DKKISNIR+LLP+LE + Sbjct: 181 KSLENELDVVEGMQFDRGYVSPYFINDPEKQAAYLDDALILLHDKKISNIRDLLPVLEAT 240 Query: 241 AKAGKPLFIIAEDIEGEALATLVVNSVRGVLKVAAVKAPGFGDRRKAMLEDIAILTGATV 300 +KAGKPL I+AEDI+GEALATLVVN++RG+LKVAAVKAPGFGDRRKAMLEDIAILTGATV Sbjct: 241 SKAGKPLLIVAEDIDGEALATLVVNAMRGILKVAAVKAPGFGDRRKAMLEDIAILTGATV 300 Query: 301 ISEETGHTLEKASLQELGSAKRIEVLKDVTTIIDGAGEQKKIDARVASIQTQIEQAASDY 360 ISEETG L+KASL++LGSAKR+EV K+ T IIDGAG+Q++I+ARV SI+TQIE+ SDY Sbjct: 301 ISEETGKQLQKASLEDLGSAKRVEVRKEDTIIIDGAGDQERIEARVKSIRTQIEETTSDY 360 Query: 361 DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALL 420 D+EKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALL Sbjct: 361 DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALL 420 Query: 421 RARAAISKLEGANADQNAGVQIVLRALEAPLRVIASNAGDEPSVVVAKVMAGKGDFGYNA 480 RAR+ + L+GAN+DQ+AG+QIVLRALEAPLRVIASNAGDEPSVV+AKV+ GKG+FGYNA Sbjct: 421 RARSTATSLKGANSDQDAGIQIVLRALEAPLRVIASNAGDEPSVVIAKVLEGKGNFGYNA 480 Query: 481 ATGEYGDLVKTGVIDPTKVTRTALQNAASIAALILTTDATVSDAPVEEK---TPRTEPEY 537 ATGEYGDLV+ GV+DPTKVTRTALQNAASIA LILTTDATV+DAP +EK P E EY Sbjct: 481 ATGEYGDLVEAGVVDPTKVTRTALQNAASIAGLILTTDATVADAPKDEKPAQAPAPELEY 540 >ref|YP_004348777.1| Chaperonin GroEL2 [Burkholderia gladioli BSR3] gb|AEA63265.1| Chaperonin GroEL2 [Burkholderia gladioli BSR3] Length = 540 Score = 904 bits (2337), Expect = 0.0, Method: Compositional matrix adjust. Identities = 455/537 (84%), Positives = 502/537 (93%), Gaps = 1/537 (0%) Query: 1 MSAKDVQFHDNARARIVKGVNVLADAVKVTLGPKGRNVLLDRSFGAPIITKDGVSVAKEV 60 MSAKDV+FHD+ARARIVKGVNVLADAVKVTLGPKGRNVL++R FGAP ITKDGVSVAKE+ Sbjct: 1 MSAKDVKFHDSARARIVKGVNVLADAVKVTLGPKGRNVLIERGFGAPTITKDGVSVAKEI 60 Query: 61 ELKDRLENMGAQVVKQVASKTADVAGDGTTTATVLAQSIVQEGMKYVAAGMNPMDLKRGI 120 ELKDR ENMGAQVVKQVASKTADVAGDGTTTATVLAQ+IVQEGMK+VAAGMNPMDLKRGI Sbjct: 61 ELKDRFENMGAQVVKQVASKTADVAGDGTTTATVLAQAIVQEGMKHVAAGMNPMDLKRGI 120 Query: 121 DKAVSAAIDELKKISRPITTNKEIAQVGSISANSDEAIGNIIAQAMERVGKEGVITVEDG 180 DKAV A +DEL+K+S+PI+TNKEIAQVGSISANSDEAIG IIA AME+VGKEGVITVEDG Sbjct: 121 DKAVGAVLDELRKLSKPISTNKEIAQVGSISANSDEAIGKIIADAMEKVGKEGVITVEDG 180 Query: 181 KSLDNELDVVEGMQFDRGYLSPYFINDPDKQLAKLEDPLILLYDKKISNIRELLPILETS 240 KSLDNELDVVEGMQFDRGYLSPYFINDP+KQ A L+D LILL+DKKIS IR+LLPILE + Sbjct: 181 KSLDNELDVVEGMQFDRGYLSPYFINDPEKQAAYLDDALILLHDKKISAIRDLLPILEAA 240 Query: 241 AKAGKPLFIIAEDIEGEALATLVVNSVRGVLKVAAVKAPGFGDRRKAMLEDIAILTGATV 300 AKAGKPL I+AEDIEGEALATLVVNS+RG+LKVAAVKAPGFGDRRKAMLEDIAILTGATV Sbjct: 241 AKAGKPLLIVAEDIEGEALATLVVNSMRGILKVAAVKAPGFGDRRKAMLEDIAILTGATV 300 Query: 301 ISEETGHTLEKASLQELGSAKRIEVLKDVTTIIDGAGEQKKIDARVASIQTQIEQAASDY 360 I+EETG LEKA+L++LG AKR+E+ K+ T IIDGAGE K+I+ARV I+ QIE SDY Sbjct: 301 IAEETGKQLEKATLEDLGRAKRVEIRKEDTIIIDGAGEAKRIEARVKQIRAQIEDTTSDY 360 Query: 361 DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALL 420 D+EKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALL Sbjct: 361 DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALL 420 Query: 421 RARAAISKLEGANADQNAGVQIVLRALEAPLRVIASNAGDEPSVVVAKVMAGKGDFGYNA 480 RARA +S L+GANA+Q+AG+QIVLRALEAPLRVIASNAGDEPSVV+AKV+ GKG+FGY+A Sbjct: 421 RARAGLSSLKGANAEQDAGIQIVLRALEAPLRVIASNAGDEPSVVIAKVLEGKGNFGYDA 480 Query: 481 ATGEYGDLVKTGVIDPTKVTRTALQNAASIAALILTTDATVSDAPVEEK-TPRTEPE 536 A+GEYGDLV+TGV+DPTKVTRTALQNAASIA LILTTDATV++AP +EK P T PE Sbjct: 481 ASGEYGDLVETGVVDPTKVTRTALQNAASIAGLILTTDATVAEAPKDEKAVPATAPE 537 >ref|YP_778270.1| chaperonin GroEL [Burkholderia ambifaria AMMD] sp|Q0B1N7.1|CH603_BURCM RecName: Full=60 kDa chaperonin 3; AltName: Full=GroEL protein 3; AltName: Full=Protein Cpn60 3 gb|ABI91936.1| chaperonin GroEL [Burkholderia ambifaria AMMD] Length = 540 Score = 904 bits (2337), Expect = 0.0, Method: Compositional matrix adjust. Identities = 450/540 (83%), Positives = 508/540 (94%), Gaps = 3/540 (0%) Query: 1 MSAKDVQFHDNARARIVKGVNVLADAVKVTLGPKGRNVLLDRSFGAPIITKDGVSVAKEV 60 MSAKDV+FHD+ARARIVKGVNVLADAVKVTLGPKGRNV+++RSFGAP ITKDGVSVAKE+ Sbjct: 1 MSAKDVKFHDSARARIVKGVNVLADAVKVTLGPKGRNVVIERSFGAPTITKDGVSVAKEI 60 Query: 61 ELKDRLENMGAQVVKQVASKTADVAGDGTTTATVLAQSIVQEGMKYVAAGMNPMDLKRGI 120 ELKDR ENMGAQ+VKQVASKTADVAGDGTTTATVLAQ+IVQEGMK+VAAGMNPMDLKRGI Sbjct: 61 ELKDRFENMGAQIVKQVASKTADVAGDGTTTATVLAQAIVQEGMKHVAAGMNPMDLKRGI 120 Query: 121 DKAVSAAIDELKKISRPITTNKEIAQVGSISANSDEAIGNIIAQAMERVGKEGVITVEDG 180 DKAV+A +DEL+K+S+PI+TN+EIAQVGSISAN+DEAIG IIA AME+VGKEGVITVEDG Sbjct: 121 DKAVAAVLDELRKLSKPISTNREIAQVGSISANADEAIGKIIADAMEKVGKEGVITVEDG 180 Query: 181 KSLDNELDVVEGMQFDRGYLSPYFINDPDKQLAKLEDPLILLYDKKISNIRELLPILETS 240 KSL+NELDVVEGMQFDRGY+SPYFINDP+KQ A L+D LILL+DKKISNIR+LLP+LE + Sbjct: 181 KSLENELDVVEGMQFDRGYVSPYFINDPEKQAAYLDDALILLHDKKISNIRDLLPVLEAT 240 Query: 241 AKAGKPLFIIAEDIEGEALATLVVNSVRGVLKVAAVKAPGFGDRRKAMLEDIAILTGATV 300 +KAGKPL I+AEDI+GEALATLVVN++RG+LKVAAVKAPGFGDRRKAMLEDIAILTGATV Sbjct: 241 SKAGKPLLIVAEDIDGEALATLVVNAMRGILKVAAVKAPGFGDRRKAMLEDIAILTGATV 300 Query: 301 ISEETGHTLEKASLQELGSAKRIEVLKDVTTIIDGAGEQKKIDARVASIQTQIEQAASDY 360 ISEETG L+KASL++LGSAKR+EV K+ T IIDGAG+Q++I+ARV SI+TQI++ SDY Sbjct: 301 ISEETGKQLQKASLEDLGSAKRVEVRKEDTIIIDGAGDQERIEARVKSIRTQIDETTSDY 360 Query: 361 DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALL 420 D+EKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALL Sbjct: 361 DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALL 420 Query: 421 RARAAISKLEGANADQNAGVQIVLRALEAPLRVIASNAGDEPSVVVAKVMAGKGDFGYNA 480 RAR+ + L+GAN+DQ+AG+QIVLRALEAPLRVIASNAGDEPSVV+AKV+ GKG+FGYNA Sbjct: 421 RARSTATSLKGANSDQDAGIQIVLRALEAPLRVIASNAGDEPSVVIAKVLEGKGNFGYNA 480 Query: 481 ATGEYGDLVKTGVIDPTKVTRTALQNAASIAALILTTDATVSDAPVEEK---TPRTEPEY 537 ATGEYGDLV+ GV+DPTKVTRTALQNAASIA LILTTDATV+DAP +EK P E EY Sbjct: 481 ATGEYGDLVEAGVVDPTKVTRTALQNAASIAGLILTTDATVADAPKDEKPAQAPAPELEY 540