BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0078.p (218 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_03524630.1| probable amino acid ABC transporter, permease... 338 3e-91 ref|YP_001351724.1| ABC-type amino acid transport system, permea... 338 3e-91 ref|ZP_03530270.1| amino acid ABC transporter permease [Rhizobiu... 336 1e-90 ref|YP_472778.1| amino acid ABC transporter permease [Rhizobium ... 335 3e-90 ref|YP_004443303.1| ABC transporter membrane spanning protein [A... 334 5e-90 >ref|ZP_03524630.1| probable amino acid ABC transporter, permease protein [Rhizobium etli GR56] Length = 219 Score = 338 bits (868), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 159/218 (72%), Positives = 191/218 (87%) Query: 1 MIGFTIWDIVRNLLLALRWTVALSLLSFLMGGTLGIVLLFMRNSRYRILRDIIRVYIEVF 60 MI FT+WDI+RNLLLA RWT+ LSL+SF+ GG +G+VLLF+R S+ + R + YIE+F Sbjct: 1 MIEFTLWDILRNLLLATRWTILLSLVSFIGGGAVGLVLLFLRISKNKAFRIFAKYYIELF 60 Query: 61 QGTPLLMQLFLVFFGIALFGIEVPAWLAAGVALTLWSASFLAEIWRGCVDAIPRGQWEAS 120 QGTPLLMQLF+ FFG+ LFGI+VPAWLAAG+AL LW+A+FLAEIWRGCV+++ RGQWEAS Sbjct: 61 QGTPLLMQLFIAFFGLGLFGIDVPAWLAAGLALILWTAAFLAEIWRGCVESVARGQWEAS 120 Query: 121 ACLAMNRFQQMRHIVLPQALRIAIPPTVGFGVQIIKGTAVTSIIGFVELSKAGTIITNAT 180 A LAM R QQMR+++LPQALR+AIPPTVGF VQI+KGTA+TSIIGFVELSKAGT++TNAT Sbjct: 121 ASLAMGRLQQMRYVILPQALRVAIPPTVGFSVQIVKGTALTSIIGFVELSKAGTVVTNAT 180 Query: 181 FQPFIVFGLVGLMYFVLCWPLSKYSQFLERKFNVAHRH 218 FQPF V+GLV L+YF LCWPLSK SQ LERK NVAHR+ Sbjct: 181 FQPFTVYGLVALIYFALCWPLSKSSQILERKLNVAHRN 218 >ref|YP_001351724.1| ABC-type amino acid transport system, permease component [Janthinobacterium sp. Marseille] gb|ABR89875.1| ABC-type amino acid transport system, permease component [Janthinobacterium sp. Marseille] Length = 218 Score = 338 bits (867), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 167/218 (76%), Positives = 194/218 (88%) Query: 1 MIGFTIWDIVRNLLLALRWTVALSLLSFLMGGTLGIVLLFMRNSRYRILRDIIRVYIEVF 60 MI F++WDI+RNLLLA RWTV LSL++FL+GG LG+++LF R S+ LR++ R+YIE+F Sbjct: 1 MISFSLWDILRNLLLAGRWTVVLSLVTFLLGGMLGLLILFFRTSKSGALRNVARIYIEIF 60 Query: 61 QGTPLLMQLFLVFFGIALFGIEVPAWLAAGVALTLWSASFLAEIWRGCVDAIPRGQWEAS 120 QGTPLLMQLFLVFFGIALFGIEVPAWLAAG+ LTLWSASFLAEIWRGCV+AIPRGQWEAS Sbjct: 61 QGTPLLMQLFLVFFGIALFGIEVPAWLAAGLTLTLWSASFLAEIWRGCVEAIPRGQWEAS 120 Query: 121 ACLAMNRFQQMRHIVLPQALRIAIPPTVGFGVQIIKGTAVTSIIGFVELSKAGTIITNAT 180 + LAMN QQMR+++LPQALRIA+PPT+GF VQIIKGTAVTSIIGFVELSKA T+ITNAT Sbjct: 121 SVLAMNYVQQMRYVILPQALRIALPPTIGFSVQIIKGTAVTSIIGFVELSKAATVITNAT 180 Query: 181 FQPFIVFGLVGLMYFVLCWPLSKYSQFLERKFNVAHRH 218 F PF V+ GL YF+LCWPLS+YSQFLERKF+ AH H Sbjct: 181 FMPFTVYAAAGLFYFILCWPLSRYSQFLERKFHAAHSH 218 >ref|ZP_03530270.1| amino acid ABC transporter permease [Rhizobium etli CIAT 894] Length = 219 Score = 336 bits (862), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 159/218 (72%), Positives = 189/218 (86%) Query: 1 MIGFTIWDIVRNLLLALRWTVALSLLSFLMGGTLGIVLLFMRNSRYRILRDIIRVYIEVF 60 MI FT+WDI+RNLLLA RWT+ LSL+SF GG +G+ LLF+R + + R + + YIE+F Sbjct: 1 MIEFTLWDILRNLLLATRWTILLSLVSFASGGAVGLGLLFLRIGKRKTFRVLAKYYIELF 60 Query: 61 QGTPLLMQLFLVFFGIALFGIEVPAWLAAGVALTLWSASFLAEIWRGCVDAIPRGQWEAS 120 QGTPLLMQLF+ FFG+ LFGI+VPAWLAAG+ALTLWSA+FLAEIWRGCV++I RGQWEAS Sbjct: 61 QGTPLLMQLFIAFFGLGLFGIDVPAWLAAGLALTLWSAAFLAEIWRGCVESIARGQWEAS 120 Query: 121 ACLAMNRFQQMRHIVLPQALRIAIPPTVGFGVQIIKGTAVTSIIGFVELSKAGTIITNAT 180 A L M R QQMR+++LPQALR+AIPPTVGF VQI+KGTA+TSIIGFVELSKAGT++TNAT Sbjct: 121 ASLGMVRLQQMRYVILPQALRVAIPPTVGFSVQIVKGTALTSIIGFVELSKAGTVVTNAT 180 Query: 181 FQPFIVFGLVGLMYFVLCWPLSKYSQFLERKFNVAHRH 218 FQPF V+GLV L+YF LCWPLSK SQ LERK NVAHR+ Sbjct: 181 FQPFTVYGLVALIYFALCWPLSKSSQILERKLNVAHRN 218 >ref|YP_472778.1| amino acid ABC transporter permease [Rhizobium etli CFN 42] gb|ABC94051.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 219 Score = 335 bits (859), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 161/218 (73%), Positives = 189/218 (86%) Query: 1 MIGFTIWDIVRNLLLALRWTVALSLLSFLMGGTLGIVLLFMRNSRYRILRDIIRVYIEVF 60 MI FT+WDI+RNLLLA RWTV LSL+SF+ GG +G+ LLF+R SR + R + + YIE+F Sbjct: 1 MITFTLWDILRNLLLATRWTVLLSLVSFVGGGMVGLCLLFLRISRRKPPRVLAKYYIELF 60 Query: 61 QGTPLLMQLFLVFFGIALFGIEVPAWLAAGVALTLWSASFLAEIWRGCVDAIPRGQWEAS 120 QGTPLLMQLF+ FFG+ LFGI+VPAWLAAG+AL LWSA+FL EIWRGCV+A+ +GQWEAS Sbjct: 61 QGTPLLMQLFIAFFGLGLFGIDVPAWLAAGLALILWSAAFLTEIWRGCVEAVAKGQWEAS 120 Query: 121 ACLAMNRFQQMRHIVLPQALRIAIPPTVGFGVQIIKGTAVTSIIGFVELSKAGTIITNAT 180 A L M R QQMR+++LPQALRIAIPPTVGF VQIIKGTA+TSIIGFVELSKAGT++TNAT Sbjct: 121 ASLGMGRLQQMRYVILPQALRIAIPPTVGFSVQIIKGTALTSIIGFVELSKAGTVVTNAT 180 Query: 181 FQPFIVFGLVGLMYFVLCWPLSKYSQFLERKFNVAHRH 218 FQPF V+GLV L+YF LCWPLSK SQ LERK NVAHR+ Sbjct: 181 FQPFTVYGLVALIYFALCWPLSKSSQILERKLNVAHRN 218 >ref|YP_004443303.1| ABC transporter membrane spanning protein [Agrobacterium sp. H13-3] gb|ADY66212.1| ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 219 Score = 334 bits (857), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 160/218 (73%), Positives = 189/218 (86%) Query: 1 MIGFTIWDIVRNLLLALRWTVALSLLSFLMGGTLGIVLLFMRNSRYRILRDIIRVYIEVF 60 M FT WDI+RNLLL+ RWT+ LSL+SF+ GG +GIVLL++R S R + R+YIEVF Sbjct: 1 MTEFTFWDILRNLLLSTRWTLLLSLVSFIGGGMVGIVLLWLRISPRRAVNRAARIYIEVF 60 Query: 61 QGTPLLMQLFLVFFGIALFGIEVPAWLAAGVALTLWSASFLAEIWRGCVDAIPRGQWEAS 120 QGTPLLMQLF+ FFG+ L G++VPAWLAAGVAL LW+A+FLAEIWRGCV+AI +GQWEAS Sbjct: 61 QGTPLLMQLFIAFFGLGLLGVDVPAWLAAGVALILWTAAFLAEIWRGCVEAIAKGQWEAS 120 Query: 121 ACLAMNRFQQMRHIVLPQALRIAIPPTVGFGVQIIKGTAVTSIIGFVELSKAGTIITNAT 180 A LAM R QQMR+++LPQAL+IAIPPTVGF VQ++KGTA+TSIIGFVELSKAGTI+TNAT Sbjct: 121 ASLAMGRLQQMRYVILPQALKIAIPPTVGFSVQVVKGTALTSIIGFVELSKAGTIVTNAT 180 Query: 181 FQPFIVFGLVGLMYFVLCWPLSKYSQFLERKFNVAHRH 218 FQPF V+GLV L+YF LCWPLSK SQFLERK NVAHR+ Sbjct: 181 FQPFTVYGLVALIYFALCWPLSKSSQFLERKLNVAHRN 218