BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0071.p (154 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001355132.1| auxin efflux carrier [Janthinobacterium sp. ... 254 3e-66 ref|YP_001101426.1| high-affinity branched-chain amino acid tran... 251 3e-65 ref|YP_004751032.1| high-affinity branched-chain amino acid tran... 246 7e-64 ref|YP_003777800.1| AsnC family transcription regulator protein ... 232 1e-59 ref|YP_787766.1| AsnC/Lrp family transcriptional regulator [Bord... 225 2e-57 >ref|YP_001355132.1| auxin efflux carrier [Janthinobacterium sp. Marseille] gb|ABR90285.1| auxin efflux carrier [Janthinobacterium sp. Marseille] Length = 157 Score = 254 bits (650), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 122/153 (79%), Positives = 138/153 (90%) Query: 2 KINLDELDRRILNALQEDAAQTNFQLAEHVHASPPTCLRRVKRLVEAGVITRQVAILAPE 61 +++LDELDRRILNALQ DA+QTN LA VHASPPTCLRRVKRL++AGVI RQVAI+AP+ Sbjct: 5 QLDLDELDRRILNALQMDASQTNNDLAAAVHASPPTCLRRVKRLIDAGVIERQVAIVAPQ 64 Query: 62 KLGPALTAIVEITLDQQGDERQVEFEGIVAAEPAVLQCYRVSPGPDFVLMVQVADMPAYH 121 +G LT+IVEITLD+Q DE+QVEFE +VA E AVLQCYRVSPGPDFVL+VQVADMPAYH Sbjct: 65 MVGAGLTSIVEITLDKQADEQQVEFEALVAQESAVLQCYRVSPGPDFVLVVQVADMPAYH 124 Query: 122 ALAHRLFATHQNVRNVRSYFSIHRSKFETRIAV 154 LAHRLFATH NVRNVRS+FSI+RSKFETRIAV Sbjct: 125 VLAHRLFATHANVRNVRSFFSINRSKFETRIAV 157 >ref|YP_001101426.1| high-affinity branched-chain amino acid transport system; global regulatory protein, Leu responsive; site-specific blocking of 549 methylation [Herminiimonas arsenicoxydans] emb|CAL63305.1| Transcriptional regulator, AsnC family [Herminiimonas arsenicoxydans] Length = 157 Score = 251 bits (640), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 121/152 (79%), Positives = 135/152 (88%) Query: 3 INLDELDRRILNALQEDAAQTNFQLAEHVHASPPTCLRRVKRLVEAGVITRQVAILAPEK 62 I LDELDRRILNALQ D++QTN LA VHASPPTCLRRVKRLV+AGVI RQVAI++P+K Sbjct: 6 ILLDELDRRILNALQGDSSQTNNDLALAVHASPPTCLRRVKRLVDAGVIERQVAIVSPQK 65 Query: 63 LGPALTAIVEITLDQQGDERQVEFEGIVAAEPAVLQCYRVSPGPDFVLMVQVADMPAYHA 122 +G LTAIVEITLD Q ERQVEFE +VA E AVLQCYRVSPGPDFVL++QVADMPAY+A Sbjct: 66 IGAGLTAIVEITLDNQAAERQVEFETVVAGESAVLQCYRVSPGPDFVLVIQVADMPAYNA 125 Query: 123 LAHRLFATHQNVRNVRSYFSIHRSKFETRIAV 154 L HRLFA+H NVRNV+S+FSIHRSKFETRIAV Sbjct: 126 LVHRLFASHANVRNVKSFFSIHRSKFETRIAV 157 >ref|YP_004751032.1| high-affinity branched-chain amino acid transport system [Collimonas fungivorans Ter331] gb|AEK60209.1| High-affinity branched-chain amino acid transport system [Collimonas fungivorans Ter331] Length = 154 Score = 246 bits (628), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 119/154 (77%), Positives = 135/154 (87%) Query: 1 MKINLDELDRRILNALQEDAAQTNFQLAEHVHASPPTCLRRVKRLVEAGVITRQVAILAP 60 M I LDELD+RILNALQ DAAQTN QLA+ VHASPPTCLRRVKRL +AG+I RQVAI+AP Sbjct: 1 MDIVLDELDKRILNALQADAAQTNHQLAQLVHASPPTCLRRVKRLTDAGIILRQVAIVAP 60 Query: 61 EKLGPALTAIVEITLDQQGDERQVEFEGIVAAEPAVLQCYRVSPGPDFVLMVQVADMPAY 120 +K+G LTAIVE+TLD Q ER EFE +VA EPA+LQCYRVSPGPDFVL++QVADM AY Sbjct: 61 DKVGAGLTAIVEVTLDNQAAERLQEFEVVVADEPALLQCYRVSPGPDFVLVLQVADMAAY 120 Query: 121 HALAHRLFATHQNVRNVRSYFSIHRSKFETRIAV 154 HALAH+LFA +NVRNVR+YFSIHRSKFETR+AV Sbjct: 121 HALAHQLFAAQKNVRNVRTYFSIHRSKFETRLAV 154 >ref|YP_003777800.1| AsnC family transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ65892.1| AsnC family transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 159 Score = 232 bits (591), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 113/154 (73%), Positives = 128/154 (83%) Query: 1 MKINLDELDRRILNALQEDAAQTNFQLAEHVHASPPTCLRRVKRLVEAGVITRQVAILAP 60 M LD+LDRRIL ALQ DA+QTN +LA VHASPPTCLRRVKRLVE GVI RQVA+L Sbjct: 1 MTFELDDLDRRILKALQADASQTNQELAARVHASPPTCLRRVKRLVEGGVIARQVALLDA 60 Query: 61 EKLGPALTAIVEITLDQQGDERQVEFEGIVAAEPAVLQCYRVSPGPDFVLMVQVADMPAY 120 +K+ ALTA+VEITLD+QG+E Q FE +VA EPAV QCYRVSPGPDFVL+V V DM +Y Sbjct: 61 QKVAAALTAVVEITLDRQGEEEQQAFEALVADEPAVQQCYRVSPGPDFVLVVLVRDMSSY 120 Query: 121 HALAHRLFATHQNVRNVRSYFSIHRSKFETRIAV 154 HALAHRLFA+ +NVRNVRSYFSIHRSKFET I + Sbjct: 121 HALAHRLFASQRNVRNVRSYFSIHRSKFETAIPI 154 >ref|YP_787766.1| AsnC/Lrp family transcriptional regulator [Bordetella avium 197N] emb|CAJ50881.1| AsnC/Lrp-family transcriptional regulator [Bordetella avium 197N] Length = 162 Score = 225 bits (573), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 112/152 (73%), Positives = 125/152 (82%) Query: 1 MKINLDELDRRILNALQEDAAQTNFQLAEHVHASPPTCLRRVKRLVEAGVITRQVAILAP 60 ++ LDELDRRIL LQ D+A TN LA VHASPPTCLRRV+RL EAGVITRQVA+L Sbjct: 6 LQPELDELDRRILEQLQHDSAITNQDLALRVHASPPTCLRRVRRLTEAGVITRQVALLDA 65 Query: 61 EKLGPALTAIVEITLDQQGDERQVEFEGIVAAEPAVLQCYRVSPGPDFVLMVQVADMPAY 120 +KLG +LTAIVEITLD Q ER EFE + AEPAVLQCYRVSPGPDFV++VQV DMPAY Sbjct: 66 QKLGSSLTAIVEITLDVQAAERLDEFEQWMLAEPAVLQCYRVSPGPDFVVIVQVRDMPAY 125 Query: 121 HALAHRLFATHQNVRNVRSYFSIHRSKFETRI 152 HALAHR F H NVRNVR++FSIHR+KFETRI Sbjct: 126 HALAHRAFTAHANVRNVRTFFSIHRAKFETRI 157