BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0067.p (399 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003808129.1| DegT/DnrJ/EryC1/StrS aminotransferase [Desul... 282 6e-74 ref|ZP_05105833.1| DegT/DnrJ/EryC1/StrS aminotransferase family ... 241 1e-61 ref|ZP_08484370.1| DegT/DnrJ/EryC1/StrS aminotransferase [Methyl... 226 7e-57 ref|YP_001231102.1| DegT/DnrJ/EryC1/StrS aminotransferase [Geoba... 224 2e-56 dbj|BAC57035.1| 4-dehydratase [Micromonospora griseorubida] 220 3e-55 >ref|YP_003808129.1| DegT/DnrJ/EryC1/StrS aminotransferase [Desulfarculus baarsii DSM 2075] gb|ADK85535.1| DegT/DnrJ/EryC1/StrS aminotransferase [Desulfarculus baarsii DSM 2075] Length = 402 Score = 282 bits (722), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 161/398 (40%), Positives = 230/398 (57%), Gaps = 8/398 (2%) Query: 3 IKVELNDLALGGGKPLFEQIKSVSNLVRPDIESFLKYSRKFFDAQTSTGHGPVETLMERR 62 +K L DLA+ GG LFE + L PD F K++R FD + T +GP+ ++E R Sbjct: 1 MKRRLEDLAIFGGPRLFESFRPTGQLSLPDSRVFFKHARTIFDQRRLTNNGPLVRMLEER 60 Query: 63 LAEFHEARHCVSFCGGFWGLVLAMKCLALPGRTEVVMPSLTYRRLADIVAWAGLTPHFCE 122 LA H++ HCVSFC +VL ++ L V+MP+ TY L I WAG P FC+ Sbjct: 61 LALLHQSAHCVSFCNASVAIVLLLRLLGGDDGGNVLMPTFTYPGLPHIALWAGFKPVFCD 120 Query: 123 VDPDLLCITGETAATCINENTALILGVHPIVNCCDIDGLEALSERTGIPLLIDAVESVYE 182 VD I + A + + +IL VH + + C ID L L+ + G+ LL D+V + Sbjct: 121 VDQHTHAIDVASVAANLTPRSVVILAVHQVQSPCQIDELTTLARQRGVALLFDSVHGLGC 180 Query: 183 SYKGRKIGSCARAECFSMQSSKLFNAFEGGYVTTNDDVLAERLRTMRDFGVGADGIPDEV 242 +++G+ IG AE FS+ ++KL N FEGGYVTTNDD LA LR+ R FG D V Sbjct: 181 THRGKPIGGFGAAEVFSLHATKLLNGFEGGYVTTNDDALAAELRSARSFGFQGK---DNV 237 Query: 243 CALGV--QQNEMHASMALACLDDVDEQMAANLQRYRAYQRCLATVPGIKLREFDESERCG 300 LG+ + NE+HA++ALA LDD+++ + AN R+ AY+R A +PG+ + E+ +ER Sbjct: 238 VRLGLNGKLNEIHAALALAALDDLEQTIQANRARHEAYRRLFADLPGLNILEYATNERHN 297 Query: 301 FKNILVELLDDWPLTREATISLLNAENMLCRPYYSPPLHLKSTGYPMLWGD--LAQTERL 358 ++ + E+ WPL+R+ T+ LLNAEN L RPYYSPPLH S P GD L E L Sbjct: 298 YELTIFEMTTAWPLSRDDTLRLLNAENALARPYYSPPLH-HSEHCPPGCGDVSLPVAEAL 356 Query: 359 AKKFLLLPCGYFVSEADVEQIAHFLAFIQKHAQDIKQR 396 A +F+ +P G VS AD+E +A + F+ + + R Sbjct: 357 ATRFIQMPVGDLVSLADIEALAELMTFVGANGPTVAAR 394 >ref|ZP_05105833.1| DegT/DnrJ/EryC1/StrS aminotransferase family [Methylophaga thiooxidans DMS010] gb|EEF78461.1| DegT/DnrJ/EryC1/StrS aminotransferase family [Methylophaga thiooxydans DMS010] Length = 391 Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 134/384 (34%), Positives = 220/384 (57%), Gaps = 18/384 (4%) Query: 9 DLALGGGKPLFEQIKSVSNLVRPDI---ESFLKYSRKFFDAQTSTGHGPVETLMERRLAE 65 DLA+ G P F++ V RP++ FLK+ F+++ + +GP L+E+R+A+ Sbjct: 9 DLAINGAPPAFDEPLHVG---RPNVGEKAEFLKHVDDIFESKWLSNNGPKVQLLEQRVAD 65 Query: 66 FHEARHCVSFCGGFWGLVLAMKCLALPGRTEVVMPSLTYRRLADIVAWAGLTPHFCEVDP 125 +H ++C++ G L +A++ L L G EV++PS T+ A ++W G+TP F ++DP Sbjct: 66 YHNVKYCIAMSNGTVALEIAIRALELEG--EVIIPSYTFIATAHALSWQGITPIFADIDP 123 Query: 126 DLLCITGETAATCINENTALILGVHPIVNCCDIDGLEALSERTGIPLLIDAVESVYESYK 185 D C+ ++ I+ NT I+GVH +D L+ ++++ + L+ DA + SYK Sbjct: 124 DTHCLDPDSVRKMISPNTTGIIGVHLWGQTAPVDELQKIADQHNLKLMFDAAHAFGCSYK 183 Query: 186 GRKIGSCARAECFSMQSSKLFNAFEGGYVTTNDDVLAERLRTMRDFGVGADGIPDEVCAL 245 G+ IG+ AE S ++KLFN FEGG V TN+D LAE++R MR+FG D V Sbjct: 184 GQMIGNFGEAEVLSFHATKLFNTFEGGAVLTNNDALAEKMRLMRNFGFSG---LDNVIYS 240 Query: 246 GV--QQNEMHASMALACLDDVDEQMAANLQRYRAYQRCLATVPGIKLREFDESERCGFKN 303 G + E+ A+M L LD++D + N + YRAYQ+ + +PG+ L FDESER ++ Sbjct: 241 GTNGKMTEICAAMGLVNLDNLDAVVKRNQENYRAYQQGIDGLPGLSLSTFDESERNNYQY 300 Query: 304 ILVELLDDWPLTREATISLLNAENMLCRPYYSPP----LHLKSTGYPMLWGDLAQTERLA 359 +++E+ +D P++R+ + L+AEN+L R Y+ P LH + YP L TE+++ Sbjct: 301 VVMEVGEDCPVSRDDMVEALHAENILARKYFWPGCHNMLHYRKL-YPHARLLLPMTEQMS 359 Query: 360 KKFLLLPCGYFVSEADVEQIAHFL 383 K ++LP G +S V I + Sbjct: 360 DKVVVLPTGTSLSAEIVNVITQVV 383 >ref|ZP_08484370.1| DegT/DnrJ/EryC1/StrS aminotransferase [Methylomicrobium album BG8] gb|EGL04500.1| DegT/DnrJ/EryC1/StrS aminotransferase [Methylomicrobium album BG8] Length = 392 Score = 226 bits (575), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 135/391 (34%), Positives = 207/391 (52%), Gaps = 16/391 (4%) Query: 1 MAIKVELNDLALGGGKPLFEQIKSVSNLVRPDI---ESFLKYSRKFFDAQTSTGHGPVET 57 M + DLA+ G P F+ V RP+I ++F+KY+ F+ + +GP+ Sbjct: 1 MKTITTVQDLAINGAGPAFDLPLHVG---RPNIGSRDAFMKYADDIFERCWLSNNGPLVQ 57 Query: 58 LMERRLAEFHEARHCVSFCGGFWGLVLAMKCLALPGRTEVVMPSLTYRRLADIVAWAGLT 117 ERR+A++H +HCV+ C G L +A++ L L G EV++PS T+ A + W +T Sbjct: 58 EFERRVADYHRVKHCVAMCNGTIALEIAIRALGLSG--EVIVPSYTFIATAHALHWQAIT 115 Query: 118 PHFCEVDPDLLCITGETAATCINENTALILGVHPIVNCCDIDGLEALSERTGIPLLIDAV 177 P F ++ + E I T+ I+GVH ++ L+A+++ G+ LL DA Sbjct: 116 PVFADIGERTHTLDPEAVRRMITPRTSGIIGVHLWGRSAAVEALQAIADEFGLKLLFDAA 175 Query: 178 ESVYESYKGRKIGSCARAECFSMQSSKLFNAFEGGYVTTNDDVLAERLRTMRDFGVGADG 237 + S++G IG+ E FS ++K FN FEGG V TNDD LAE +R MR+FG Sbjct: 176 HAFACSHRGAMIGNFGDCEVFSFHATKFFNTFEGGAVVTNDDALAEAMRLMRNFGFSG-- 233 Query: 238 IPDEVCALGVQQN--EMHASMALACLDDVDEQMAANLQRYRAYQRCLATVPGIKLREFDE 295 D V G E+ A+M L D +D + AN + Y AY++ LA +PGI L FDE Sbjct: 234 -LDNVIYPGTNGKMVEIAAAMGLVNFDAIDAVVEANRRNYCAYRKELADLPGISLLPFDE 292 Query: 296 SERCGFKNILVELLDDWPLTREATISLLNAENMLCRPYYSPPLHLKS---TGYPMLWGDL 352 +ER ++ +++E+ D P+ R+ I L AEN+L R Y+ P H YP L Sbjct: 293 TERNNYQYVVIEIGADCPVGRDRMIEALCAENILARKYFWPGCHNMQPYRALYPHAGLLL 352 Query: 353 AQTERLAKKFLLLPCGYFVSEADVEQIAHFL 383 A T ++A + ++LP G V EA + +A + Sbjct: 353 ANTRQVADRVVVLPTGTSVDEATIRTVASVI 383 >ref|YP_001231102.1| DegT/DnrJ/EryC1/StrS aminotransferase [Geobacter uraniireducens Rf4] gb|ABQ26529.1| DegT/DnrJ/EryC1/StrS aminotransferase [Geobacter uraniireducens Rf4] Length = 423 Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 133/400 (33%), Positives = 207/400 (51%), Gaps = 11/400 (2%) Query: 3 IKVELNDLALGGGKPLFEQIKSVSNLVRPDIESFLKYSRKFFDAQTSTGHGPVETLMERR 62 +K ++DLA+ GG P F++ V D E LK D + + +GP ERR Sbjct: 1 MKENIDDLAIFGGTPTFQETLHVGRPNLGDRERLLKRINDMLDRKWLSNNGPYVQEFERR 60 Query: 63 LAEFHEARHCVSFCGGFWGLVLAMKCLALPGRTEVVMPSLTYRRLADIVAWAGLTPHFCE 122 +++ ++C+S C G L +A++ L L G EV++PS T+ A + W +TP FC+ Sbjct: 61 ISDMIGVKNCISMCNGTVALEIAIRSLELKG--EVILPSFTFVATAHALQWQEITPVFCD 118 Query: 123 VDPDLLCITGETAATCINENTALILGVHPIVNCCDIDGLEALSERTGIPLLIDAVESVYE 182 +DP I I T I+GVH CDI+ LE ++ + LL DA Sbjct: 119 IDPKTHTIDPSCIEKMITPRTTGIIGVHLWGRPCDIEALEEIAASHRLKLLFDAAHGFGC 178 Query: 183 SYKGRKIGSCARAECFSMQSSKLFNAFEGGYVTTNDDVLAERLRTMRDFGVGADGIPDEV 242 SYKGR IGS AE FS ++K FN EGG + TNDD LA ++R M++FG D V Sbjct: 179 SYKGRMIGSFGSAEVFSFHATKFFNTCEGGAIATNDDDLAGKIRLMKNFGFSG---YDNV 235 Query: 243 CALGV--QQNEMHASMALACLDDVDEQMAANLQRYRAYQRCLATVPGIKLREFDESERCG 300 +G + NE A M L L+ +DE +A N YR Y++ L + G+ L +D+ E+C Sbjct: 236 IYIGTNGKMNEFSALMGLTNLESIDEFIAVNFGNYRCYEQELRDLAGVTLINYDQREKCN 295 Query: 301 FKNILVELLDDWP-LTREATISLLNAENMLCRPYYSPPLHLKS---TGYPMLWGDLAQTE 356 ++ +++E+ + +TR+ + +L AEN+L R Y+ P H + +P L +TE Sbjct: 296 YQYVVLEIDESITHVTRDQIVDILRAENVLARRYFYPGCHRMEPYRSYFPHARLVLPETE 355 Query: 357 RLAKKFLLLPCGYFVSEADVEQIAHFLAFIQKHAQDIKQR 396 RLA + L LP G V ++ +I + + + ++R Sbjct: 356 RLANRVLSLPAGTAVGPDEIRKICQIMRLAVVYGLEAEER 395 >dbj|BAC57035.1| 4-dehydratase [Micromonospora griseorubida] Length = 438 Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 133/397 (33%), Positives = 204/397 (51%), Gaps = 8/397 (2%) Query: 3 IKVELNDLALGGGKPLFEQIKSVSNLVRPDIESFLKYSRKFFDAQTSTGHGPVETLMERR 62 +K ++DLAL GG+ F Q V D F D Q T GP+ E R Sbjct: 1 MKRNIDDLALFGGREAFLQTLHVGRPGAVDRARFFDRLSWALDNQWLTNQGPLTREFEDR 60 Query: 63 LAEFHEARHCVSFCGGFWGLVLAMKCLALPGRTEVVMPSLTYRRLADIVAWAGLTPHFCE 122 +A+ RHC++ C L L M+ L G EV++PS+T+ A W GL P FC+ Sbjct: 61 IADRVGVRHCLATCNATVALQLLMRATELTG--EVIVPSMTFAATAHAAQWLGLRPVFCD 118 Query: 123 VDPDLLCITGETAATCINENTALILGVHPIVNCCDIDGLEALSERTGIPLLIDAVESVYE 182 +DP C+ E I + I+GVH C ++ L+ +++ IPL DA + Sbjct: 119 LDPRTGCLDPERVRAAITPRPSAIVGVHLFGRPCAVEELQRIADEHTIPLFFDAAHAFGC 178 Query: 183 SYKGRKIGSCARAECFSMQSSKLFNAFEGGYVTTNDDVLAERLRTMRDFGVG--ADGIPD 240 + KGR IG AE FS ++K+ N+FEGG + T+DD LA R+R + +FG G AD + Sbjct: 179 TAKGRPIGGFGTAEVFSFHATKVVNSFEGGAIVTDDDGLAARVRALHNFGFGLVAD---N 235 Query: 241 EVCALGVQQNEMHASMALACLDDVDEQMAANLQRYRAYQRCLATVPGIKLREFDESERCG 300 + +E A+M L LD ++ +A N + Y Y+ LA +PG++ FD ER Sbjct: 236 PGGGTNAKMSEASAAMGLTSLDAFEQVVAHNQRTYELYRAELARLPGLQTITFDPEERHN 295 Query: 301 FKNILVELLDDWP-LTREATISLLNAENMLCRPYYSPPLHLKSTGYPMLWGDLAQTERLA 359 ++ ++VE+ L R+ I+LL +EN++ +PY+SPP+H + L TERLA Sbjct: 296 YQYVVVEIDPAVAGLHRDLLITLLRSENVVAQPYFSPPVHQQQPYRSGPRVSLPHTERLA 355 Query: 360 KKFLLLPCGYFVSEADVEQIAHFLAFIQKHAQDIKQR 396 + + LP G VS+ DV ++ + + H +I +R Sbjct: 356 GRVMALPTGPTVSQEDVRRVCNIVRLAVSHGPEITRR 392