BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0053.p (336 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777784.1| UDP-glucose 4-epimerase [Herbaspirillum sero... 534 e-150 ref|YP_748076.1| UDP-glucose 4-epimerase [Nitrosomonas eutropha ... 509 e-142 ref|YP_284462.1| UDP-galactose 4-epimerase [Dechloromonas aromat... 501 e-140 ref|NP_840758.1| NAD-dependent epimerase/dehydratase family prot... 495 e-138 ref|YP_003809932.1| UDP-glucose 4-epimerase [gamma proteobacteri... 481 e-134 >ref|YP_003777784.1| UDP-glucose 4-epimerase [Herbaspirillum seropedicae SmR1] gb|ACO81756.1| GalE [Herbaspirillum seropedicae SmR1] gb|ADJ65876.1| UDP-glucose 4-epimerase protein [Herbaspirillum seropedicae SmR1] Length = 336 Score = 534 bits (1376), Expect = e-150, Method: Compositional matrix adjust. Identities = 250/335 (74%), Positives = 292/335 (87%) Query: 1 MNILVTGGAGYIGSHTCVELLKAGHQVVVFDNFCNSFPESVRRVEKITGKTLALVEGDIR 60 MNILVTGGAGYIGSHTCVELLKAGH+V+VFDNFCNS PESV+RV++ITGKTL+LV+GDIR Sbjct: 1 MNILVTGGAGYIGSHTCVELLKAGHEVIVFDNFCNSSPESVKRVQQITGKTLSLVKGDIR 60 Query: 61 DREALEKALRSYECDAVIHFAGLKAVGESVAKPLEYYDNNVVGTVRLLEAMQATGVKTIV 120 +RE LE LR ++C+AVIHFAGLKAVGESV +PL YYDNNVVGTVRLLEAMQATGVKTIV Sbjct: 61 NREQLESVLREFKCEAVIHFAGLKAVGESVEQPLMYYDNNVVGTVRLLEAMQATGVKTIV 120 Query: 121 FSSSATVYGVPQFLPYTEDHPLSSTSPYGRGKLMVEDILRDYHVAQPDSRIALLRYFNPV 180 FSSSATVYG PQ+LP E HPLS+++PYGR K+++ED+LRDY+ A PD +IALLRYFNPV Sbjct: 121 FSSSATVYGDPQYLPLDEAHPLSASNPYGRSKIVIEDMLRDYYRAHPDWKIALLRYFNPV 180 Query: 181 GAHHSGLIGEDPQGVPNNLMPFVTQVAIGKRDRLQIWGGDYDTHDGTGVRDYIHVEDLAV 240 GAH SGLIGEDP G+PNNLMPFV QVAIG+R+RL IWGGDY T DGTGVRD+IHV DLA Sbjct: 181 GAHESGLIGEDPGGIPNNLMPFVAQVAIGRRERLNIWGGDYPTPDGTGVRDFIHVVDLAR 240 Query: 241 GHVKALEHLRQPQCFAVNLGSGRGHSVLEVVKAFEQACGKSIPYEIGPRRAGDLPAYYAD 300 GHV AL+ L PQCFAVNLG+G G+SVL+V+KA+E+ACGK++PY I RR GD+ + YA+ Sbjct: 241 GHVAALQALDAPQCFAVNLGTGVGYSVLDVLKAYEKACGKTLPYAIAERRPGDIASCYAN 300 Query: 301 VTLAKSLLGWKATRSLETMCADSWRWQQANPDGFR 335 AK LGW+AT LE MCADSW+WQQ NP+GF+ Sbjct: 301 PAEAKRKLGWEATLGLEAMCADSWKWQQMNPNGFK 335 >ref|YP_748076.1| UDP-glucose 4-epimerase [Nitrosomonas eutropha C91] gb|ABI60111.1| UDP-galactose 4-epimerase [Nitrosomonas eutropha C91] Length = 335 Score = 509 bits (1312), Expect = e-142, Method: Compositional matrix adjust. Identities = 235/334 (70%), Positives = 276/334 (82%) Query: 1 MNILVTGGAGYIGSHTCVELLKAGHQVVVFDNFCNSFPESVRRVEKITGKTLALVEGDIR 60 M +LVTGGAGYIGSHTCVELL AG++VVVFDNFCNS PE++RRVEKITGK LA+V GD+R Sbjct: 1 MKVLVTGGAGYIGSHTCVELLTAGYEVVVFDNFCNSHPEALRRVEKITGKKLAVVRGDVR 60 Query: 61 DREALEKALRSYECDAVIHFAGLKAVGESVAKPLEYYDNNVVGTVRLLEAMQATGVKTIV 120 D+ +EK L+ Y C+AVIHFAGLKAVGESV KPLEYYDNNV+ T+RLL AMQ V T+V Sbjct: 61 DQATIEKVLKDYHCEAVIHFAGLKAVGESVEKPLEYYDNNVISTLRLLAAMQNCAVYTLV 120 Query: 121 FSSSATVYGVPQFLPYTEDHPLSSTSPYGRGKLMVEDILRDYHVAQPDSRIALLRYFNPV 180 FSSSATVYG PQ LP TEDHPLS+T+PYGR KLM+E++LRD + A P RIA+LRYFNPV Sbjct: 121 FSSSATVYGEPQRLPLTEDHPLSATNPYGRSKLMIEEMLRDVYRANPQFRIAILRYFNPV 180 Query: 181 GAHHSGLIGEDPQGVPNNLMPFVTQVAIGKRDRLQIWGGDYDTHDGTGVRDYIHVEDLAV 240 GAH SGLIGEDPQG+PNNLMPFV QVA+G+R+ L +WG DY THDGTGVRDYIHV DLA+ Sbjct: 181 GAHDSGLIGEDPQGIPNNLMPFVAQVAVGRREHLNVWGSDYPTHDGTGVRDYIHVVDLAL 240 Query: 241 GHVKALEHLRQPQCFAVNLGSGRGHSVLEVVKAFEQACGKSIPYEIGPRRAGDLPAYYAD 300 GH+ AL HL PQC AVNLG+G G+SVL+VVKAFE A G+ +PY++ PRRAGD+ YAD Sbjct: 241 GHLSALGHLATPQCLAVNLGTGTGYSVLDVVKAFENASGQHVPYQLSPRRAGDVATCYAD 300 Query: 301 VTLAKSLLGWKATRSLETMCADSWRWQQANPDGF 334 LA+ +L W A R L MC D WRWQ+ NP+G+ Sbjct: 301 PALAEKILEWNAQRDLAAMCRDHWRWQKCNPEGY 334 >ref|YP_284462.1| UDP-galactose 4-epimerase [Dechloromonas aromatica RCB] gb|AAZ45992.1| UDP-galactose 4-epimerase [Dechloromonas aromatica RCB] Length = 334 Score = 501 bits (1291), Expect = e-140, Method: Compositional matrix adjust. Identities = 232/333 (69%), Positives = 274/333 (82%) Query: 3 ILVTGGAGYIGSHTCVELLKAGHQVVVFDNFCNSFPESVRRVEKITGKTLALVEGDIRDR 62 ILVTGGAGYIGSHTCVELL +G VVVFDNFCNS PES++RVE ITGK +A+V+GDIRD+ Sbjct: 2 ILVTGGAGYIGSHTCVELLNSGQDVVVFDNFCNSHPESIKRVEAITGKKIAVVKGDIRDQ 61 Query: 63 EALEKALRSYECDAVIHFAGLKAVGESVAKPLEYYDNNVVGTVRLLEAMQATGVKTIVFS 122 A+E ALR Y+C +VIHFAGLKAVGESV KPL YYDNNV+GT +LL+AM G+KT+VFS Sbjct: 62 AAVEAALRQYDCQSVIHFAGLKAVGESVEKPLAYYDNNVIGTHKLLQAMSNCGIKTLVFS 121 Query: 123 SSATVYGVPQFLPYTEDHPLSSTSPYGRGKLMVEDILRDYHVAQPDSRIALLRYFNPVGA 182 SSATVYG PQFLP TE HPLS T+PYGR KL++ED+LRD + + RI +LRYFNPVGA Sbjct: 122 SSATVYGEPQFLPLTEQHPLSGTNPYGRTKLVIEDMLRDLYRSDSSWRIGILRYFNPVGA 181 Query: 183 HHSGLIGEDPQGVPNNLMPFVTQVAIGKRDRLQIWGGDYDTHDGTGVRDYIHVEDLAVGH 242 H SGLIGEDPQG+PNNLMPFV QVA+G+R+RL +WG DY T DGTGVRDYIHV DLA+GH Sbjct: 182 HESGLIGEDPQGIPNNLMPFVAQVAVGRRERLSVWGNDYPTPDGTGVRDYIHVVDLAIGH 241 Query: 243 VKALEHLRQPQCFAVNLGSGRGHSVLEVVKAFEQACGKSIPYEIGPRRAGDLPAYYADVT 302 +KAL L + +CF VNLG+G G SVL+V+KAFE A G+ IPYE+ PRRAGD+ + YAD Sbjct: 242 LKALACLSESRCFEVNLGTGTGCSVLDVIKAFESASGRPIPYELAPRRAGDVASCYADPA 301 Query: 303 LAKSLLGWKATRSLETMCADSWRWQQANPDGFR 335 A LL W+A R+LE MC D+WRWQ NP+GFR Sbjct: 302 FAAELLQWRAERNLEVMCVDAWRWQSNNPNGFR 334 >ref|NP_840758.1| NAD-dependent epimerase/dehydratase family protein [Nitrosomonas europaea ATCC 19718] emb|CAD84590.1| NAD dependent epimerase/dehydratase family [Nitrosomonas europaea ATCC 19718] Length = 335 Score = 495 bits (1274), Expect = e-138, Method: Compositional matrix adjust. Identities = 229/334 (68%), Positives = 277/334 (82%) Query: 1 MNILVTGGAGYIGSHTCVELLKAGHQVVVFDNFCNSFPESVRRVEKITGKTLALVEGDIR 60 MN+LVTGGAGYIGSHTCVELL AG++VV+FDNFCNS PE++RR+E+IT K + +V GDIR Sbjct: 1 MNVLVTGGAGYIGSHTCVELLTAGYEVVIFDNFCNSHPEALRRIEQITSKKITIVTGDIR 60 Query: 61 DREALEKALRSYECDAVIHFAGLKAVGESVAKPLEYYDNNVVGTVRLLEAMQATGVKTIV 120 ++ A+EKAL+ Y C+AVIHFAGLKAVGESV KPLEYYDNNV+GT RLL AMQ GV T+V Sbjct: 61 NQVAIEKALKDYGCEAVIHFAGLKAVGESVEKPLEYYDNNVIGTHRLLAAMQNCGVYTLV 120 Query: 121 FSSSATVYGVPQFLPYTEDHPLSSTSPYGRGKLMVEDILRDYHVAQPDSRIALLRYFNPV 180 FSSSATVYG PQ LP TEDHPLS+T+PYGR KL++E++LRD + A P RIA+LRYFNPV Sbjct: 121 FSSSATVYGEPQRLPLTEDHPLSATNPYGRSKLIIEEMLRDVYRADPRFRIAILRYFNPV 180 Query: 181 GAHHSGLIGEDPQGVPNNLMPFVTQVAIGKRDRLQIWGGDYDTHDGTGVRDYIHVEDLAV 240 GAH SGLIGEDPQG+PNNLMPFV QVA+G+R+ L +WG DY THDGTGVRDYIHV DLA+ Sbjct: 181 GAHDSGLIGEDPQGIPNNLMPFVAQVAVGRREYLNVWGSDYPTHDGTGVRDYIHVVDLAL 240 Query: 241 GHVKALEHLRQPQCFAVNLGSGRGHSVLEVVKAFEQACGKSIPYEIGPRRAGDLPAYYAD 300 GH+ AL++L PQC A+NLG+G G+SVL+V+KAFE+A + I Y + RR+GD+ A YA+ Sbjct: 241 GHLGALDYLTVPQCMAINLGTGIGYSVLDVIKAFEEASSRQIDYRLASRRSGDVAACYAN 300 Query: 301 VTLAKSLLGWKATRSLETMCADSWRWQQANPDGF 334 LA+ LL WKA R L MC D WRWQ+ NP G+ Sbjct: 301 PALAEKLLRWKAQRDLAVMCRDHWRWQKNNPAGY 334 >ref|YP_003809932.1| UDP-glucose 4-epimerase [gamma proteobacterium HdN1] emb|CBL44271.1| UDP-glucose 4-epimerase [gamma proteobacterium HdN1] Length = 335 Score = 481 bits (1238), Expect = e-134, Method: Compositional matrix adjust. Identities = 225/334 (67%), Positives = 268/334 (80%) Query: 1 MNILVTGGAGYIGSHTCVELLKAGHQVVVFDNFCNSFPESVRRVEKITGKTLALVEGDIR 60 M++LVTGGAGYIGSHTCVELL AGHQVVV DNF NS PES+ RV+KI GK++ LVEGDIR Sbjct: 1 MSVLVTGGAGYIGSHTCVELLGAGHQVVVLDNFSNSHPESIVRVQKIAGKSVTLVEGDIR 60 Query: 61 DREALEKALRSYECDAVIHFAGLKAVGESVAKPLEYYDNNVVGTVRLLEAMQATGVKTIV 120 D + K +R + C +VIHFAGLKAVGESV +PL YYDNNV GT+ LL AM + GVKT+V Sbjct: 61 DEAQVAKTIREHNCTSVIHFAGLKAVGESVEQPLRYYDNNVQGTLCLLRAMGSCGVKTLV 120 Query: 121 FSSSATVYGVPQFLPYTEDHPLSSTSPYGRGKLMVEDILRDYHVAQPDSRIALLRYFNPV 180 FSSSATVYG PQ LP E HPLS+T+PYGR KLM+E+ILRD A+PD RI +LRYFNPV Sbjct: 121 FSSSATVYGEPQQLPLVESHPLSATNPYGRSKLMIEEILRDLFRAEPDWRIGILRYFNPV 180 Query: 181 GAHHSGLIGEDPQGVPNNLMPFVTQVAIGKRDRLQIWGGDYDTHDGTGVRDYIHVEDLAV 240 GAH SG IGEDPQG+PNNLMP+V QVAIG+R+RL +WG DY T DGTGVRDYIHV DLA+ Sbjct: 181 GAHKSGTIGEDPQGIPNNLMPYVAQVAIGRRERLSVWGSDYPTPDGTGVRDYIHVVDLAL 240 Query: 241 GHVKALEHLRQPQCFAVNLGSGRGHSVLEVVKAFEQACGKSIPYEIGPRRAGDLPAYYAD 300 GHVKAL+ L+ P CF VNLG+G G+SVL+VV+AFE+A G+ + Y++ RR GD+ + YAD Sbjct: 241 GHVKALDKLKAPSCFEVNLGTGVGYSVLDVVRAFERASGRKVAYQLCERRPGDVASCYAD 300 Query: 301 VTLAKSLLGWKATRSLETMCADSWRWQQANPDGF 334 A S LGWKA R + MC D+WRWQ+ NP G+ Sbjct: 301 PHFAASFLGWKAERDINAMCEDAWRWQEQNPQGY 334