BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0004.0050.p         (131 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003777775.1| dihydroneopterin aldolase [Herbaspirillum se...   231   3e-59
ref|YP_724779.1| dihydroneopterin aldolase [Ralstonia eutropha H...   231   4e-59
ref|YP_294452.1| dihydroneopterin aldolase [Ralstonia eutropha J...   229   1e-58
ref|YP_001101420.1| hypothetical protein HEAR3192 [Herminiimonas...   227   5e-58
ref|YP_001355127.1| dihydroneopterin aldolase [Janthinobacterium...   225   1e-57

>ref|YP_003777775.1| dihydroneopterin aldolase [Herbaspirillum seropedicae SmR1]
 gb|ADJ65867.1| dihydroneopterin aldolase protein [Herbaspirillum seropedicae SmR1]
          Length = 131

 Score =  231 bits (589), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 109/128 (85%), Positives = 116/128 (90%)

Query: 1   MFSLSHPELNDCRRLFLRNYEVLINIGVHEFEKKGEQRILINVDLFIPLAMSTPEHDQLQ 60
           M  LSHP L DCRRLFLRNYEV INIGVHEFEKKGEQRILINVDL++PLA +TP  D L 
Sbjct: 1   MLFLSHPSLQDCRRLFLRNYEVFINIGVHEFEKKGEQRILINVDLYVPLAETTPTADHLD 60

Query: 61  EVVDYDFIRSTIAKRMAQGHIHLQETLCDDVVKAMLAHPKVRAVRVSTEKPDVYPDCDSV 120
           EVVDYDFIRSTIA+RMA+GHIHLQETLCDDV+ AMLAHPKVRAVRVSTEKPDVYPDCDSV
Sbjct: 61  EVVDYDFIRSTIAQRMARGHIHLQETLCDDVMTAMLAHPKVRAVRVSTEKPDVYPDCDSV 120

Query: 121 GVEVFRVK 128
           GVE FR+K
Sbjct: 121 GVETFRIK 128


>ref|YP_724779.1| dihydroneopterin aldolase [Ralstonia eutropha H16]
 ref|YP_004684106.1| dihydroneopterin aldolase FolB [Cupriavidus necator N-1]
 emb|CAJ91411.1| dihydroneopterin aldolase [Ralstonia eutropha H16]
 gb|AEI75625.1| dihydroneopterin aldolase FolB [Cupriavidus necator N-1]
          Length = 133

 Score =  231 bits (588), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 104/130 (80%), Positives = 120/130 (92%)

Query: 1   MFSLSHPELNDCRRLFLRNYEVLINIGVHEFEKKGEQRILINVDLFIPLAMSTPEHDQLQ 60
           + +LSHP L DCRR+FLRNYEV INIGVHEFEKKGEQR+LIN+DLF+PLA STP+ D+L 
Sbjct: 4   LAALSHPSLQDCRRMFLRNYEVQINIGVHEFEKKGEQRVLINIDLFVPLAQSTPQADKLD 63

Query: 61  EVVDYDFIRSTIAKRMAQGHIHLQETLCDDVVKAMLAHPKVRAVRVSTEKPDVYPDCDSV 120
           EVVDYDF+R+T+A+RMAQGH+HLQETLCDDV +AML HPKVRAVRVSTEKPDVYPDCDSV
Sbjct: 64  EVVDYDFMRNTVAERMAQGHVHLQETLCDDVARAMLKHPKVRAVRVSTEKPDVYPDCDSV 123

Query: 121 GVEVFRVKEA 130
           GVEVF +K+A
Sbjct: 124 GVEVFHIKQA 133


>ref|YP_294452.1| dihydroneopterin aldolase [Ralstonia eutropha JMP134]
 gb|AAZ59608.1| Dihydroneopterin aldolase [Ralstonia eutropha JMP134]
          Length = 133

 Score =  229 bits (583), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 102/129 (79%), Positives = 120/129 (93%)

Query: 1   MFSLSHPELNDCRRLFLRNYEVLINIGVHEFEKKGEQRILINVDLFIPLAMSTPEHDQLQ 60
           + +L+HP L DCRR+FLRNYEV INIGVHEFEKKGEQR+LIN+DLF+PLA STP+ D+L+
Sbjct: 4   LAALTHPSLQDCRRMFLRNYEVQINIGVHEFEKKGEQRVLINIDLFVPLAASTPQADKLE 63

Query: 61  EVVDYDFIRSTIAKRMAQGHIHLQETLCDDVVKAMLAHPKVRAVRVSTEKPDVYPDCDSV 120
           EVVDYDF+R+T+A+RMAQGH+HLQETLCDDV +AML HPKVRAVRVSTEKPDVYPDCDSV
Sbjct: 64  EVVDYDFMRNTVAERMAQGHVHLQETLCDDVARAMLKHPKVRAVRVSTEKPDVYPDCDSV 123

Query: 121 GVEVFRVKE 129
           GVEVF +K+
Sbjct: 124 GVEVFHIKQ 132


>ref|YP_001101420.1| hypothetical protein HEAR3192 [Herminiimonas arsenicoxydans]
 emb|CAL63299.1| Putative dihydroneopterin aldolase [Herminiimonas arsenicoxydans]
          Length = 131

 Score =  227 bits (578), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 109/125 (87%), Positives = 114/125 (91%)

Query: 4   LSHPELNDCRRLFLRNYEVLINIGVHEFEKKGEQRILINVDLFIPLAMSTPEHDQLQEVV 63
           L HP+L DCRRLFL NYEV INIGVHEFEKKGEQR+LINVDLFIPL  STP  D L EVV
Sbjct: 5   LFHPQLADCRRLFLSNYEVQINIGVHEFEKKGEQRVLINVDLFIPLTESTPTADTLDEVV 64

Query: 64  DYDFIRSTIAKRMAQGHIHLQETLCDDVVKAMLAHPKVRAVRVSTEKPDVYPDCDSVGVE 123
           DYDF+RSTIAKRM QGHIHLQETLCDDVVKAMLAHPKVRAVRVSTEKPDVYPDC+SVGVE
Sbjct: 65  DYDFMRSTIAKRMEQGHIHLQETLCDDVVKAMLAHPKVRAVRVSTEKPDVYPDCESVGVE 124

Query: 124 VFRVK 128
           VFR+K
Sbjct: 125 VFRIK 129


>ref|YP_001355127.1| dihydroneopterin aldolase [Janthinobacterium sp. Marseille]
 gb|ABR88347.1| dihydroneopterin aldolase [Janthinobacterium sp. Marseille]
          Length = 131

 Score =  225 bits (574), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 107/125 (85%), Positives = 115/125 (92%)

Query: 4   LSHPELNDCRRLFLRNYEVLINIGVHEFEKKGEQRILINVDLFIPLAMSTPEHDQLQEVV 63
           L HP+L DCRRLFLRNYEV INIGVHEFEKKGEQR+LINVDLFIPL  STP  D L EVV
Sbjct: 5   LFHPQLADCRRLFLRNYEVQINIGVHEFEKKGEQRVLINVDLFIPLKESTPTADNLDEVV 64

Query: 64  DYDFIRSTIAKRMAQGHIHLQETLCDDVVKAMLAHPKVRAVRVSTEKPDVYPDCDSVGVE 123
           DYD++RSTIAKRMA+GHIHLQETLCDDVVKAMLAHPKVRA RVSTEKPDVYPDC+SVGVE
Sbjct: 65  DYDYMRSTIAKRMAEGHIHLQETLCDDVVKAMLAHPKVRAARVSTEKPDVYPDCESVGVE 124

Query: 124 VFRVK 128
           VF++K
Sbjct: 125 VFQIK 129