BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0048.p (385 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777773.1| hypothetical protein Hsero_4398 [Herbaspiril... 524 e-146 ref|YP_004751041.1| hypothetical protein CFU_0380 [Collimonas fu... 523 e-146 ref|YP_001355125.1| hypothetical protein mma_3435 [Janthinobacte... 512 e-143 ref|YP_001101418.1| hypothetical protein HEAR3190 [Herminiimonas... 509 e-142 ref|ZP_04577549.1| conserved hypothetical protein [Oxalobacter f... 405 e-111 >ref|YP_003777773.1| hypothetical protein Hsero_4398 [Herbaspirillum seropedicae SmR1] gb|ADJ65865.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 394 Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust. Identities = 268/390 (68%), Positives = 303/390 (77%), Gaps = 9/390 (2%) Query: 1 MQLQLPEPSADALAASRSLQLLIADDIRRNGGWISFARYMELVLYAPALGYYSGGAAKLG 60 MQLQLPEP DA AAS +LQ IA +I GGWISF RYMEL LYAP +GYYSGG+AKLG Sbjct: 9 MQLQLPEPGEDAQAASHTLQHQIAGEIAAAGGWISFQRYMELALYAPQVGYYSGGSAKLG 68 Query: 61 KDGDFTTAPEISPLFGATLAHLATELF---PQTGAAIMEFGAGTGKLAFDILSELRAAGK 117 K+GDFTTAPEISPL+GATLA LA E+ P ++EFGAGTGKLA DIL+EL+A Sbjct: 69 KEGDFTTAPEISPLYGATLASLAAEVIAASPSVDNVLLEFGAGTGKLAHDILTELQARAA 128 Query: 118 LPEHYYIVEISSQLRARQQEKLRDF-PQVQWLDSLPATFSGVVIGNEVLDAMPVQLVVRS 176 LP+ Y+IVEIS+QLRARQQ+ L F P VQWLD+LPATFSGVV+GNEVLDAMPV+L V++ Sbjct: 129 LPQRYFIVEISAQLRARQQQTLAAFAPLVQWLDALPATFSGVVVGNEVLDAMPVRLAVKA 188 Query: 177 EQGWLERGVALDDAGAFTFADRADRADAAAILAAQIPDGDALPVGYLTEVHPIGAAFMQS 236 EQGW ERGVALD G F DR+ + AQIPD LP GYLTEV P+ FM + Sbjct: 189 EQGWQERGVALDAEGRLRFEDRS----VDDLPLAQIPDAHELPPGYLTEVAPVAIGFMHT 244 Query: 237 LAAMLQRGNSA-ALLIDYGFPAAEYYFPGRAQGTLMCHYRHHAHADPFYLPGLQDVTAHV 295 L ML G A A+L DYGFPAAEYY R QGTLMCHYRHHAH DPFY PGLQD+TAHV Sbjct: 245 LGRMLASGPGALAILPDYGFPAAEYYLHDRDQGTLMCHYRHHAHTDPFYWPGLQDITAHV 304 Query: 296 DFTAMARAAIEGGLDVLGYASQAGFLLSAGIGELLLRTSPEQSAQYLPQSNAVQKLISPA 355 DFTAMA AA+E G +VL Y SQ FLL+AGIGELLLRTSPE SA+YLP +N +QKLISPA Sbjct: 305 DFTAMAVAAVEEGAEVLAYTSQGAFLLNAGIGELLLRTSPEDSARYLPLANGMQKLISPA 364 Query: 356 EMGELFKVLVVGKNVDWPGRLLTHDRTHRL 385 EMGELFKVL +GKNV+WP R+L HDRTHRL Sbjct: 365 EMGELFKVLAIGKNVEWPQRMLRHDRTHRL 394 >ref|YP_004751041.1| hypothetical protein CFU_0380 [Collimonas fungivorans Ter331] gb|AEK60218.1| hypothetical protein CFU_0380 [Collimonas fungivorans Ter331] Length = 409 Score = 523 bits (1347), Expect = e-146, Method: Compositional matrix adjust. Identities = 273/402 (67%), Positives = 308/402 (76%), Gaps = 21/402 (5%) Query: 1 MQLQLPEPSADALAASRSLQLLIADDIRRNGGWISFARYMELVLYAPALGYYSGGAAKLG 60 MQLQLPE S +A ASR L LIA +IRR GWISFARYMEL+LYAP LGYYSGGAAKLG Sbjct: 12 MQLQLPEASVEAQRASRLLHNLIATEIRRQHGWISFARYMELLLYAPDLGYYSGGAAKLG 71 Query: 61 KDGDFTTAPEISPLFGATLAHLATELF---PQTGAAIMEFGAGTGKLAFDILSELR---A 114 KDGDFTTAPEI+PLFGATLAHL TEL P I+EFGAG+G+LA DIL+EL A Sbjct: 72 KDGDFTTAPEITPLFGATLAHLTTELLVSSPALQPRILEFGAGSGQLAHDILTELATSVA 131 Query: 115 AGK----LPEHYYIVEISSQLRARQQEKLRDFPQVQWLDSLPATFSGVVIGNEVLDAMPV 170 AG LP+ YYIVE+S++LRARQQ KL+ FPQVQWLD LP FSGVVIGNEVLDAMPV Sbjct: 132 AGDNGAGLPQAYYIVELSAELRARQQLKLQAFPQVQWLDRLPEAFSGVVIGNEVLDAMPV 191 Query: 171 QLVVRSEQGWLERGVALDDAGA------FTFADRADRADAAAILAAQIPDGDALPVGYLT 224 +LV+R EQGWL+RGV L + G F + DR A L AQIPD ++L VG+LT Sbjct: 192 ELVLRGEQGWLQRGVGLAETGVEGEDGQFVYIDRP----AEPTLIAQIPDAESLTVGHLT 247 Query: 225 EVHPIGAAFMQSLAAMLQRGNSA-ALLIDYGFPAAEYYFPGRAQGTLMCHYRHHAHADPF 283 EVHP+ FM SL ML+ G A AL DYGFPAAEYY R QGTLMCHYRHHAH DPF Sbjct: 248 EVHPVAIGFMHSLGGMLKAGQGAVALFFDYGFPAAEYYLQQRDQGTLMCHYRHHAHPDPF 307 Query: 284 YLPGLQDVTAHVDFTAMARAAIEGGLDVLGYASQAGFLLSAGIGELLLRTSPEQSAQYLP 343 YLPGLQDVTAHVDFTAMA AA++ GLD+LGY+SQA FLL AGIG+LLLRT PE + YLP Sbjct: 308 YLPGLQDVTAHVDFTAMAAAALDSGLDLLGYSSQAAFLLEAGIGKLLLRTPPENALAYLP 367 Query: 344 QSNAVQKLISPAEMGELFKVLVVGKNVDWPGRLLTHDRTHRL 385 Q+NA+QKL+SPAEMGELFKVL VG + + P R HDR+HRL Sbjct: 368 QANALQKLVSPAEMGELFKVLAVGVHAELPARFANHDRSHRL 409 >ref|YP_001355125.1| hypothetical protein mma_3435 [Janthinobacterium sp. Marseille] gb|ABR89685.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 386 Score = 512 bits (1319), Expect = e-143, Method: Compositional matrix adjust. Identities = 261/391 (66%), Positives = 298/391 (76%), Gaps = 11/391 (2%) Query: 1 MQLQLPEPSADALAASRSLQLLIADDIRRNGGWISFARYMELVLYAPALGYYSGGAAKLG 60 MQLQLPEPS+DAL+AS +LQ LIAD+I R GWISFARYMEL LYAP +GYYSGGAAKLG Sbjct: 1 MQLQLPEPSSDALSASNTLQNLIADEINRRAGWISFARYMELALYAPDVGYYSGGAAKLG 60 Query: 61 KDGDFTTAPEISPLFGATLAHLATELFPQTGAAIMEFGAGTGKLAFDILSELRAAGKLPE 120 KDGDFTTAPEI+ LFG TLAH A EL Q+ I+EFGAGTGKLA DIL+E AAG E Sbjct: 61 KDGDFTTAPEITSLFGETLAHAAGELMAQSAPQILEFGAGTGKLALDILTECAAAGIPLE 120 Query: 121 HYYIVEISSQLRARQQEKLRDFPQVQWLDSLPATFSGVVIGNEVLDAMPVQLVVRSEQGW 180 Y IVE+S +LRARQQ+ L FPQV WLD P FSGVV+GNEVLDAMPV LVV+ E W Sbjct: 121 RYSIVELSGELRARQQQTLAGFPQVSWLDDFPPAFSGVVLGNEVLDAMPVSLVVKGEAEW 180 Query: 181 LERGVALDDAGAFTFADRADRADAAAILAAQIPDGDALPVGYLTEVHPIGAAFMQSLAAM 240 LERGV++ D G F F DR + L QIPD LPVGYLTEVHPI A FM +LA M Sbjct: 181 LERGVSIAD-GRFIFVDRPCDQE----LITQIPDAAELPVGYLTEVHPIAAGFMHTLATM 235 Query: 241 LQRG------NSAALLIDYGFPAAEYYFPGRAQGTLMCHYRHHAHADPFYLPGLQDVTAH 294 L G AA+LIDYGFPA+EYY RA+GTLMCHYRHH+H DPFYLPGLQD+TAH Sbjct: 236 LTAGFEQSGKGGAAILIDYGFPASEYYLDQRAEGTLMCHYRHHSHPDPFYLPGLQDITAH 295 Query: 295 VDFTAMARAAIEGGLDVLGYASQAGFLLSAGIGELLLRTSPEQSAQYLPQSNAVQKLISP 354 VDFT+MA AA+ GL+++GY SQAGFLL+AG+G+ LL T+PE YLP++NAVQKL SP Sbjct: 296 VDFTSMAYAAVRNGLEMVGYMSQAGFLLTAGLGDRLLATAPEDHMAYLPKANAVQKLTSP 355 Query: 355 AEMGELFKVLVVGKNVDWPGRLLTHDRTHRL 385 AEMGELFKVLVVGK V P + D++ RL Sbjct: 356 AEMGELFKVLVVGKAVQLPDQFDRADQSRRL 386 >ref|YP_001101418.1| hypothetical protein HEAR3190 [Herminiimonas arsenicoxydans] emb|CAL63297.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans] Length = 386 Score = 509 bits (1311), Expect = e-142, Method: Compositional matrix adjust. Identities = 263/391 (67%), Positives = 299/391 (76%), Gaps = 11/391 (2%) Query: 1 MQLQLPEPSADALAASRSLQLLIADDIRRNGGWISFARYMELVLYAPALGYYSGGAAKLG 60 MQLQLP+P DALAAS LQ LIA++IRR+ GWISFARYMEL LYAP LGYYSGGAAKLG Sbjct: 1 MQLQLPQPIPDALAASHKLQNLIAEEIRRHDGWISFARYMELALYAPDLGYYSGGAAKLG 60 Query: 61 KDGDFTTAPEISPLFGATLAHLATELFPQTGAAIMEFGAGTGKLAFDILSELRAAGKLPE 120 KDGDFTTAPEI+ LFG TLAH A +L Q+ I+EFGAGTGKLA DIL+E AAG E Sbjct: 61 KDGDFTTAPEITSLFGETLAHAAGDLMAQSAPEILEFGAGTGKLALDILTECAAAGIHLE 120 Query: 121 HYYIVEISSQLRARQQEKLRDFPQVQWLDSLPATFSGVVIGNEVLDAMPVQLVVRSEQGW 180 HY IVE+S +LRARQQ+ L FPQV WLD P FSGVV+GNEVLDAMPV LVV+ E W Sbjct: 121 HYAIVELSGELRARQQQLLAGFPQVSWLDDFPPAFSGVVLGNEVLDAMPVSLVVKGEHAW 180 Query: 181 LERGVALDDAGAFTFADRADRADAAAILAAQIPDGDALPVGYLTEVHPIGAAFMQSLAAM 240 LERGVA D G F +ADR DAA L AQIPD + LPVGYLTEVHP+ A FM +LA M Sbjct: 181 LERGVAYTD-GKFVYADRP--CDAA--LVAQIPDEENLPVGYLTEVHPVAAGFMGTLAEM 235 Query: 241 LQRG------NSAALLIDYGFPAAEYYFPGRAQGTLMCHYRHHAHADPFYLPGLQDVTAH 294 G AA+L DYGFPA EYY R++GTLMCHYRHHAH DPFYLPGLQD+TAH Sbjct: 236 FAAGLEQSGKGGAAILFDYGFPAGEYYLDQRSEGTLMCHYRHHAHPDPFYLPGLQDITAH 295 Query: 295 VDFTAMARAAIEGGLDVLGYASQAGFLLSAGIGELLLRTSPEQSAQYLPQSNAVQKLISP 354 VDFTAMA AA+ GL+++GY SQA FLL+AG+G+ LL+TSP + YLP++NAVQKL SP Sbjct: 296 VDFTAMAYAAVRSGLEMVGYMSQAAFLLAAGLGDRLLQTSPADARVYLPKANAVQKLTSP 355 Query: 355 AEMGELFKVLVVGKNVDWPGRLLTHDRTHRL 385 AEMGELFKVLVVG V P + D++HRL Sbjct: 356 AEMGELFKVLVVGLGVQLPDQFDRMDQSHRL 386 >ref|ZP_04577549.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] gb|EEO28511.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] Length = 384 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 212/385 (55%), Positives = 261/385 (67%), Gaps = 3/385 (0%) Query: 3 LQLPEPSADALAASRSLQLLIADDIRRNGGWISFARYMELVLYAPALGYYSGGAAKLGKD 62 + PEPS +A ++S +L+ I I GWISFA YM+ VLY P GYYSGGAA G Sbjct: 1 MNCPEPSREARSSSVALKNRIVARIESRSGWISFADYMQQVLYEPEYGYYSGGAANFGGQ 60 Query: 63 GDFTTAPEISPLFGATLAHLATELFPQTGAAIMEFGAGTGKLAFDILSELRAAGKLPEHY 122 GDF TAPE SPL+G +AH L QT I+E GAGTG+LA DIL+EL + G + Y Sbjct: 61 GDFVTAPETSPLYGRAMAHALIPLIEQTRPQILEIGAGTGRLAHDILAELASKGISVDCY 120 Query: 123 YIVEISSQLRARQQEKLRDFPQVQWLDSLPATFSGVVIGNEVLDAMPVQLVVRSEQGWLE 182 I+E+SS+LR RQQ L P V WL +LP F GVVI NEVLDAMPVQLVV+ + GW E Sbjct: 121 DILELSSELRERQQTSLSACPHVNWLSALPERFDGVVIANEVLDAMPVQLVVKRKTGWQE 180 Query: 183 RGVALDDAGAFTFADRADRADAAAILAAQIPDGDALPVGYLTEVHPIGAAFMQSLAAMLQ 242 GV + G F ++R A + QIPD D+LP GY+TE+H F+++LA ML Sbjct: 181 LGVCHLN-GDFVLSERPCDTFLADAITRQIPDSDSLPEGYVTEIHTHACGFVRTLAEMLA 239 Query: 243 RGN-SAALLIDYGFPAAEYYFPGRAQGTLMCHYRHHAHADPFYLPGLQDVTAHVDFTAMA 301 G+ +AA+ +DYGFPA EYY R+ GTLMCHYRH H DPF+LPGLQD+TAHVDFTA+A Sbjct: 240 SGSGAAAVFVDYGFPAHEYYHRDRSSGTLMCHYRHRLHTDPFFLPGLQDMTAHVDFTALA 299 Query: 302 RAAIEGGLDVLGYASQAGFLLSAGIGELLLRTSPEQSA-QYLPQSNAVQKLISPAEMGEL 360 R A GGLD+L YASQA FL+ AG+ EL+ S E A QY QS AVQKL+SPAEMGEL Sbjct: 300 RIAEAGGLDLLCYASQANFLIGAGLMELMQGVSAEMDARQYSLQSQAVQKLLSPAEMGEL 359 Query: 361 FKVLVVGKNVDWPGRLLTHDRTHRL 385 FKV+++G NV P +L D++ RL Sbjct: 360 FKVMILGHNVIPPAFMLDVDKSGRL 384