BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0040.p (410 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_371906.1| citrate synthase [Burkholderia sp. 383] >gi|779... 283 4e-74 ref|YP_003774693.1| citrate synthase [Herbaspirillum seropedicae... 280 3e-73 ref|YP_004234577.1| Citrate synthase [Acidovorax avenae subsp. a... 277 2e-72 gb|EGP43232.1| citrate synthase [Achromobacter xylosoxidans AXX-A] 275 1e-71 ref|YP_004487318.1| Citrate synthase [Delftia sp. Cs1-4] >gi|333... 264 2e-68 >ref|YP_371906.1| citrate synthase [Burkholderia sp. 383] gb|ABB11262.1| Citrate synthase [Burkholderia sp. 383] Length = 429 Score = 283 bits (724), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 144/219 (65%), Positives = 166/219 (75%), Gaps = 3/219 (1%) Query: 110 AEGSGALMRLLAASLLGTRPSPAPIHEQCAKAWKLDAHGAALVRMALVLCADHELNASSF 169 A+G G L+R+LAA LL TR APIHEQCA+AW + GA L+RMALVLCADHELNASSF Sbjct: 171 AQGCGDLVRILAACLLRTRIDTAPIHEQCARAWGVGPAGAELIRMALVLCADHELNASSF 230 Query: 170 TARCVASTGTSLRASVIAGLAALTGGKHGGATARVEALLDEIDANGKADIAAGLQRRLAR 229 T RC+AST SLRA V+ GLA L+G +HG ATAR EAL DE+ G D+ + RLAR Sbjct: 231 TGRCIASTNASLRAVVVGGLAGLSGERHGAATARGEALWDEL---GNKDVEQKMGERLAR 287 Query: 230 GDDLPGFGHHLYPDGDVRANALLAEVLPHHPAWRDIIAAARNLIGQHPSLDFALVALRRH 289 GD LPGFGH LYPDGDVRA LL+ +LP HP W+ +I A L+GQ PSLD ALVALRRH Sbjct: 288 GDGLPGFGHALYPDGDVRATYLLSRILPRHPQWKRMIDAGSALVGQKPSLDLALVALRRH 347 Query: 290 LQLPVGAAFGLFALGRGMGWIAQALEQRASGELIRPXAL 328 L+LPVGAAFGLFALGR +GWIA LEQR +LIRP A+ Sbjct: 348 LRLPVGAAFGLFALGRSIGWIAHGLEQREQSDLIRPRAV 386 >ref|YP_003774693.1| citrate synthase [Herbaspirillum seropedicae SmR1] gb|ADJ62785.1| citrate synthase protein [Herbaspirillum seropedicae SmR1] Length = 431 Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 143/219 (65%), Positives = 167/219 (76%), Gaps = 3/219 (1%) Query: 110 AEGSGALMRLLAASLLGTRPSPAPIHEQCAKAWKLDAHGAALVRMALVLCADHELNASSF 169 A+G G L+R+LAA LL TRP +PIH QCA+AW + G L+RMALVLCADHELNASSF Sbjct: 171 AQGCGDLVRILAACLLRTRPDTSPIHVQCARAWGVGRAGGELIRMALVLCADHELNASSF 230 Query: 170 TARCVASTGTSLRASVIAGLAALTGGKHGGATARVEALLDEIDANGKADIAAGLQRRLAR 229 T+RCVAST SLRA VIAGLA L+GG+HG T RVEAL DE+ G D+ ++ RL+R Sbjct: 231 TSRCVASTDASLRAVVIAGLAGLSGGRHGATTGRVEALWDEL---GTRDVDRKMRERLSR 287 Query: 230 GDDLPGFGHHLYPDGDVRANALLAEVLPHHPAWRDIIAAARNLIGQHPSLDFALVALRRH 289 GDDLPGFGH LYPDGD RA+ LL+++LP H W +I A L GQ PS+DFALVALRRH Sbjct: 288 GDDLPGFGHTLYPDGDPRASYLLSQILPRHSPWAAMIDAGITLTGQKPSVDFALVALRRH 347 Query: 290 LQLPVGAAFGLFALGRGMGWIAQALEQRASGELIRPXAL 328 L+LPVGAAFGLFALGR +GWIA LEQR LIRP A+ Sbjct: 348 LRLPVGAAFGLFALGRSIGWIAHGLEQREQHHLIRPRAV 386 >ref|YP_004234577.1| Citrate synthase [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX46010.1| Citrate synthase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 428 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 144/219 (65%), Positives = 165/219 (75%), Gaps = 3/219 (1%) Query: 110 AEGSGALMRLLAASLLGTRPSPAPIHEQCAKAWKLDAHGAALVRMALVLCADHELNASSF 169 A+G G L+R+LAA LL TRP PIHEQCA+AW LD GA L+R ALVL ADHELNAS+F Sbjct: 171 AQGCGDLVRILAACLLRTRPDTRPIHEQCARAWGLDPAGAELIRKALVLGADHELNASTF 230 Query: 170 TARCVASTGTSLRASVIAGLAALTGGKHGGATARVEALLDEIDANGKADIAAGLQRRLAR 229 T RCVAST SLRA VI GLA L+GG+HG TARVEAL DE+ G DI ++ RL+R Sbjct: 231 TGRCVASTDASLRAVVIGGLAGLSGGRHGATTARVEALWDEL---GTRDIERRMRDRLSR 287 Query: 230 GDDLPGFGHHLYPDGDVRANALLAEVLPHHPAWRDIIAAARNLIGQHPSLDFALVALRRH 289 GDDLPGFGH LYPDGD RA LLA ++P HP W +I A L+GQ PS+D ALVALRRH Sbjct: 288 GDDLPGFGHSLYPDGDARAAYLLARLMPRHPPWARMIDAGTALVGQKPSMDLALVALRRH 347 Query: 290 LQLPVGAAFGLFALGRGMGWIAQALEQRASGELIRPXAL 328 L+LP+GAAFGLFALGR +GWIA LEQR LIRP A+ Sbjct: 348 LRLPMGAAFGLFALGRSIGWIAHGLEQRGQPGLIRPRAV 386 >gb|EGP43232.1| citrate synthase [Achromobacter xylosoxidans AXX-A] Length = 403 Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 150/223 (67%), Positives = 176/223 (78%), Gaps = 5/223 (2%) Query: 110 AEGSGALMRLLAASLLGTRPSPAPIHEQCAKAWKLDAHGAALVRMALVLCADHELNASSF 169 A+G GAL+R LAA LL T P APIH QCA+AW DA GA L+RMALVLCADHELNASSF Sbjct: 171 AQGCGALVRTLAACLLQTAPDAAPIHVQCARAWGADAAGADLIRMALVLCADHELNASSF 230 Query: 170 TARCVASTGTSLRASVIAGLAALTGGKHGGATARVEALLDEID-----ANGKADIAAGLQ 224 TARC+ASTG SLRA ++ GLAALTGG+HGG TAR EA+ DE++ A+G +A GL+ Sbjct: 231 TARCIASTGASLRAGIVGGLAALTGGRHGGTTARGEAMWDELERGDGGADGGQRLARGLR 290 Query: 225 RRLARGDDLPGFGHHLYPDGDVRANALLAEVLPHHPAWRDIIAAARNLIGQHPSLDFALV 284 RLARG+DLPGFGHHLYP GD RA+ALLA +LP P W+ +I A LIGQ PS+DFALV Sbjct: 291 ERLARGEDLPGFGHHLYPAGDPRASALLARILPQRPDWQALIEQAFELIGQRPSVDFALV 350 Query: 285 ALRRHLQLPVGAAFGLFALGRGMGWIAQALEQRASGELIRPXA 327 A+RRHL LP+GAAFGLFALGR +GW+A LEQR S ++IRP A Sbjct: 351 AVRRHLGLPLGAAFGLFALGRSIGWLAHGLEQRGSPDVIRPRA 393 >ref|YP_004487318.1| Citrate synthase [Delftia sp. Cs1-4] gb|AEF88963.1| Citrate synthase [Delftia sp. Cs1-4] Length = 397 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 154/218 (70%), Positives = 173/218 (79%), Gaps = 4/218 (1%) Query: 110 AEGSGALMRLLAASLLGTRPSPAPIHEQCAKAWKLDAHGAALVRMALVLCADHELNASSF 169 A G GAL+RLLAA LLGT P APIH QCA+AW LDA GA LVRMALVLCADHELNAS F Sbjct: 171 AAGCGALLRLLAACLLGTAPDKAPIHLQCAQAWALDAQGADLVRMALVLCADHELNASGF 230 Query: 170 TARCVASTGTSLRASVIAGLAALTGGKHGGATARVEALLDEIDANGKADIAAGLQRRLAR 229 TARCVASTG SLRA+V+ GLAALTGG+HGG TARVEAL DE+ G+A A L++RLAR Sbjct: 231 TARCVASTGASLRAAVVGGLAALTGGRHGGTTARVEALWDEL---GEAQAPARLRQRLAR 287 Query: 230 GDDLPGFGHHLYPDGDVRANALLAEVLPHHPAWRDIIAAARNLIGQHPSLDFALVALRRH 289 G+ LPGFGHHLYP+GDVRA ALL E+LP + A L G PS+DFALVALRRH Sbjct: 288 GETLPGFGHHLYPEGDVRA-ALLLEMLPRQGPAAALAAEVMALTGLAPSVDFALVALRRH 346 Query: 290 LQLPVGAAFGLFALGRGMGWIAQALEQRASGELIRPXA 327 LQLP G+AFGLFALGR GW+AQALEQRA+ ++IRP A Sbjct: 347 LQLPAGSAFGLFALGRCAGWLAQALEQRATRQIIRPRA 384