BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0038.p (128 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001561476.1| copper resistance protein CopC [Delftia acid... 163 9e-39 ref|YP_145680.1| copper resistance C signal peptide protein [Ral... 161 2e-38 ref|YP_581923.1| copper resistance protein CopC [Cupriavidus met... 161 3e-38 ref|ZP_05135684.1| copper resistance protein CopC [Stenotrophomo... 160 5e-38 ref|YP_002008597.1| copc copper resistance protein precursor, ''... 159 1e-37 >ref|YP_001561476.1| copper resistance protein CopC [Delftia acidovorans SPH-1] ref|YP_003977187.1| copper resistance protein C [Achromobacter xylosoxidans A8] ref|ZP_08506048.1| Copper resistance protein C precursor CopC [Methyloversatilis universalis FAM5] gb|ABX33091.1| copper resistance protein CopC [Delftia acidovorans SPH-1] gb|ADN85631.1| CopC [Achromobacter sp. AO22] gb|ADP14472.1| copper resistance protein C [Achromobacter xylosoxidans A8] gb|EGK70626.1| Copper resistance protein C precursor CopC [Methyloversatilis universalis FAM5] Length = 128 Score = 163 bits (412), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 82/128 (64%), Positives = 92/128 (71%) Query: 1 MSYQFFIAKTAGAIAAAAFATAAFAHPRLLGSTPEDNSTVSAPEKIELRFSENLSKQFSG 60 M+ FIAK IAA FATAAFAHP L+ STP D S VSAP IEL+FSE L QFS Sbjct: 1 MTRSHFIAKLVAPIAAGLFATAAFAHPSLVSSTPADKSQVSAPATIELKFSETLVPQFSA 60 Query: 61 ASLMMTSMPGMNHAAPMKVGAKISGAEDPKTMIITPTQPLMPGVYSIDWRAVSSDTHPIT 120 ASL+MT MPGM PMK+ A ++GA D KTM+ITP Q L PG Y ++WRAVSSDTHPIT Sbjct: 61 ASLVMTGMPGMASHGPMKINASVAGAGDGKTMVITPAQALQPGDYRVEWRAVSSDTHPIT 120 Query: 121 GKVTFAVK 128 G VTF VK Sbjct: 121 GNVTFKVK 128 >ref|YP_145680.1| copper resistance C signal peptide protein [Ralstonia metallidurans CH34] emb|CAI11329.1| copper resistance C signal peptide protein [Cupriavidus metallidurans CH34] Length = 128 Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 71/105 (67%), Positives = 88/105 (83%) Query: 24 FAHPRLLGSTPEDNSTVSAPEKIELRFSENLSKQFSGASLMMTSMPGMNHAAPMKVGAKI 83 FAHP+LL STP D + V+AP+KIEL+FSENLS QFSGA+L+MT MPGM +PMK+ AK+ Sbjct: 24 FAHPKLLTSTPADKAEVAAPQKIELKFSENLSTQFSGANLLMTGMPGMADHSPMKIAAKV 83 Query: 84 SGAEDPKTMIITPTQPLMPGVYSIDWRAVSSDTHPITGKVTFAVK 128 +G +DPKTM++TPTQPL PG Y ++WRAVSSDTHPI G +TF VK Sbjct: 84 AGGDDPKTMVVTPTQPLSPGNYRVEWRAVSSDTHPINGNITFTVK 128 >ref|YP_581923.1| copper resistance protein CopC [Cupriavidus metallidurans CH34] gb|ABF12973.1| CopC Copper resistance protein precursor, ''E set domains'' superfamily CopC Cu(II) binding protein [Cupriavidus metallidurans CH34] Length = 132 Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 71/105 (67%), Positives = 88/105 (83%) Query: 24 FAHPRLLGSTPEDNSTVSAPEKIELRFSENLSKQFSGASLMMTSMPGMNHAAPMKVGAKI 83 FAHP+LL STP D + V+AP+KIEL+FSENLS QFSGA+L+MT MPGM +PMK+ AK+ Sbjct: 28 FAHPKLLTSTPADKAEVAAPQKIELKFSENLSTQFSGANLLMTGMPGMADHSPMKIAAKV 87 Query: 84 SGAEDPKTMIITPTQPLMPGVYSIDWRAVSSDTHPITGKVTFAVK 128 +G +DPKTM++TPTQPL PG Y ++WRAVSSDTHPI G +TF VK Sbjct: 88 AGGDDPKTMVVTPTQPLSPGNYRVEWRAVSSDTHPINGNITFTVK 132 >ref|ZP_05135684.1| copper resistance protein CopC [Stenotrophomonas sp. SKA14] ref|ZP_06686126.1| copper resistance protein C [Achromobacter piechaudii ATCC 43553] ref|ZP_07793792.1| hypothetical protein PA39016_001030056 [Pseudomonas aeruginosa 39016] gb|EED39745.1| copper resistance protein CopC [Stenotrophomonas sp. SKA14] gb|EFF76943.1| copper resistance protein C [Achromobacter piechaudii ATCC 43553] gb|EFQ38888.1| hypothetical protein PA39016_001030056 [Pseudomonas aeruginosa 39016] gb|EGM21320.1| copper resistance protein C [Pseudomonas aeruginosa 152504] gb|EGM23311.1| copper resistance protein C [Pseudomonas aeruginosa 138244] Length = 128 Score = 160 bits (406), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 81/128 (63%), Positives = 91/128 (71%) Query: 1 MSYQFFIAKTAGAIAAAAFATAAFAHPRLLGSTPEDNSTVSAPEKIELRFSENLSKQFSG 60 M+ FIAK IAA FATAAFAHP L+ STP D S VSAP IEL+FSE L QFS Sbjct: 1 MTRSHFIAKLVAPIAAGLFATAAFAHPSLVSSTPADKSQVSAPATIELKFSETLVPQFSA 60 Query: 61 ASLMMTSMPGMNHAAPMKVGAKISGAEDPKTMIITPTQPLMPGVYSIDWRAVSSDTHPIT 120 ASL+MT MPGM PMK+ A ++ A D KTM+ITP Q L PG Y ++WRAVSSDTHPIT Sbjct: 61 ASLVMTGMPGMASHGPMKINASVAAAGDGKTMVITPAQALQPGDYRVEWRAVSSDTHPIT 120 Query: 121 GKVTFAVK 128 G VTF VK Sbjct: 121 GNVTFKVK 128 >ref|YP_002008597.1| copc copper resistance protein precursor, ''e set domains'' superfamily [Cupriavidus taiwanensis LMG 19424] emb|CAQ72545.1| CopC Copper resistance protein precursor, ''E set domains'' superfamily [Cupriavidus taiwanensis LMG 19424] Length = 128 Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 73/109 (66%), Positives = 88/109 (80%) Query: 20 ATAAFAHPRLLGSTPEDNSTVSAPEKIELRFSENLSKQFSGASLMMTSMPGMNHAAPMKV 79 ++ AFAHPRL S+P D + V AP+KIELRFSENL QFSGA+L+MT MPGM + APMK+ Sbjct: 20 SSLAFAHPRLEASSPADKAEVPAPQKIELRFSENLVTQFSGANLVMTGMPGMANHAPMKM 79 Query: 80 GAKISGAEDPKTMIITPTQPLMPGVYSIDWRAVSSDTHPITGKVTFAVK 128 K+SG++DPKTM+ITPTQPL PG Y +DWRAVSSDTHP+ G V F VK Sbjct: 80 AVKVSGSDDPKTMVITPTQPLPPGSYRVDWRAVSSDTHPVNGNVAFTVK 128